DY304487
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY304487 vs. ExPASy Swiss-Prot
Match: CTU2_ARATH (Cytoplasmic tRNA 2-thiolation protein 2 OS=Arabidopsis thaliana GN=CTU2 PE=2 SV=2) HSP 1 Score: 342.043 bits (876), Expect = 4.355e-93 Identity = 172/285 (60.35%), Postives = 215/285 (75.44%), Query Frame = 1 Query: 88 MACNSATGCQSGCYKNEFERDLKPATETISDS-NEQNLCVKCKANEPTP---GAGEDGKHCLDCFRSNLFGKFRLAVASNALITPADNVLVAFSGGPSSRVALQFVHELQQRAQKNFDASKDRSLPVFGVGVVFVDETAYYPVPSSEIDNAIQEIKLIVSNLSPPTKELHVIPIESIFCSNPCDGRERFKKLVDSVSDATGKEDXXXXXXXXXXQKFASENGYNRLLLGLCTSRIACHVITATVKGRGYSFTADIQYADARWEIPVVLPLRDCLAPELHMPCQLD 930 MACNS+ GC+SGCY E + K + +S N +++CVKCK N P G +DG+ C DCFR+N+FGKFRLAV S+A+ITP+DNVLVAFSGG SSRV+LQFVHELQ +A KN++AS+DRSLPVFGVGV FVDETA +P S+E+ +AI+ ++ VS LSPP K+LHV+P+ESIF S+ D R+ KL+DSV D TGKED QK A+ENGYNRL+LG CTSRIA HV+TATVKGRGYS +ADIQ+ DARW++P+VLPLRDC+ E+ C LD Sbjct: 1 MACNSS-GCESGCYDREKDNGSKIVDDAVSGGGNHESVCVKCKCNAPMTFGDGGFDDGRFCADCFRNNVFGKFRLAVTSHAMITPSDNVLVAFSGGSSSRVSLQFVHELQIKALKNYEASRDRSLPVFGVGVAFVDETAAFPALSTEMIDAIEWVRYTVSCLSPPAKDLHVVPVESIFGSDSLDARDGLLKLLDSVPDDTGKEDLLLHLKMLSLQKVAAENGYNRLVLGSCTSRIASHVLTATVKGRGYSLSADIQHVDARWKVPIVLPLRDCVRLEITRLCLLD 284
BLAST of DY304487 vs. ExPASy Swiss-Prot
Match: CTU2_ORYSI (Cytoplasmic tRNA 2-thiolation protein 2 OS=Oryza sativa subsp. indica GN=CTU2 PE=3 SV=1) HSP 1 Score: 265.003 bits (676), Expect = 6.765e-70 Identity = 131/273 (47.99%), Postives = 175/273 (64.10%), Query Frame = 1 Query: 112 CQSGCYKNEFERDLKPATETISDSNEQNLCVKCKANEPTPGAGEDGKHCLDCFRSNLFGKFRLAVASNALITPADNVLVAFSGGPSSRVALQFVHELQQRAQKNFDASKDRSLPVFGVGVVFVDETAYYPVPSSEIDNAIQEIKLIVSNLSPPTKELHVIPIESIFCSNPCDGRERFKKLVDSVSDATGKEDXXXXXXXXXXQKFASENGYNRLLLGLCTSRIACHVITATVKGRGYSFTADIQYADARWEIPVVLPLRDCLAPELHMPCQLD 930 C S E A E + + C KC C +CFR+NL GKF+LAV SNA++ P D+VL+AFSGGP+SRVALQF+HE++ +A +++D S ++LPVFGVGV FVDE+ P EI+ AI++I+ IVS+LS K +H++ +E +F + DG R ++ VD + D TG+ED QK A ENGY +++LG C S IACHV++ATVKG+GYS AD+QY D RWEIPVVLPLRDCLA EL + C+LD Sbjct: 18 CSSSASAAAVEDAAAAAAEKVGRLSLSRECGKCGGGAAAVAVAGGLGLCGECFRANLLGKFKLAVTSNAMVRPTDSVLLAFSGGPASRVALQFIHEMRCKAIESWDVSNSQALPVFGVGVAFVDESVLCSKPRDEIEMAIEDIRSIVSSLSTGVKAMHIVRLEDVFSTESEDGERRLREAVDMIGDDTGREDFLRCLRMLSLQKIAMENGYAKIMLGSCASAIACHVLSATVKGQGYSLPADVQYVDTRWEIPVVLPLRDCLAQELTLLCELD 290
BLAST of DY304487 vs. ExPASy Swiss-Prot
Match: CTU2_ORYSJ (Cytoplasmic tRNA 2-thiolation protein 2 OS=Oryza sativa subsp. japonica GN=CTU2 PE=2 SV=1) HSP 1 Score: 263.462 bits (672), Expect = 1.968e-69 Identity = 131/273 (47.99%), Postives = 174/273 (63.74%), Query Frame = 1 Query: 112 CQSGCYKNEFERDLKPATETISDSNEQNLCVKCKANEPTPGAGEDGKHCLDCFRSNLFGKFRLAVASNALITPADNVLVAFSGGPSSRVALQFVHELQQRAQKNFDASKDRSLPVFGVGVVFVDETAYYPVPSSEIDNAIQEIKLIVSNLSPPTKELHVIPIESIFCSNPCDGRERFKKLVDSVSDATGKEDXXXXXXXXXXQKFASENGYNRLLLGLCTSRIACHVITATVKGRGYSFTADIQYADARWEIPVVLPLRDCLAPELHMPCQLD 930 C S E A E + + C KC C +CFR+NL GKF+LAV SNA++ P D+VL+AFSGGP+SRVALQF+HE++ +A +++D S ++LPVFGVGV FVDE+ P EI+ AI++I+ IVS+LS K +H+ +E +F + DG R ++ VD + D TG+ED QK A ENGY +++LG C S IACHV++ATVKG+GYS AD+QY D RWEIPVVLPLRDCLA EL + C+LD Sbjct: 18 CSSSASAAAVEDAAAAAAEKVGRLSLSRECGKCGGGAAAVAVAGGLGLCGECFRANLLGKFKLAVTSNAMVRPTDSVLLAFSGGPASRVALQFIHEMRCKAIESWDVSNSQALPVFGVGVAFVDESVLCSKPRDEIEMAIEDIRSIVSSLSTGVKAMHIARLEDVFSTESEDGERRLREAVDMIGDDTGREDFLRCLRMLSLQKIAMENGYAKIMLGSCASAIACHVLSATVKGQGYSLPADVQYVDTRWEIPVVLPLRDCLAQELTLLCELD 290
BLAST of DY304487 vs. ExPASy Swiss-Prot
Match: CTU2_HUMAN (Cytoplasmic tRNA 2-thiolation protein 2 OS=Homo sapiens GN=CTU2 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 8.980e-14 Identity = 79/300 (26.33%), Postives = 113/300 (37.67%), Query Frame = 1 Query: 181 SNEQNLCVKCKANEPTPGAGEDGKHCLDCFRSNLFGKFRLAVASNALITPADNVLVAFSGGP-SSRVALQFVHELQQRAQKNFDASKDRSLPVFGVGVVFVDETAYYPVPSSEIDNAIQEIKLIVSNLSPPTKELHVIPIESIFCSNP----CDGRE------RFKKLVD---------------------------------------------------SVSDATGKEDXXXXXXXXXXQKFASENGYNRLLLGLCTSRIACHVITATVKGRGYSFTADIQYADAR-WEIPVVLPLRD 891 S EQ CVKCK +P C DCF++ KFR + N LI P + VL+A+SGGP SS + Q + L Q + K F GV+FVDE A E + E+K I+ P HV+ +E +F P C +E +K VD SV T KE+ A +GY++++ G +R+A ++T GRG D ++D R ++ VV P+RD Sbjct: 23 SREQK-CVKCKEAQPVVVIRAGDAFCRDCFKAFYVHKFRAMLGKNRLIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLR---------FVAGVIFVDEGAACGQSLEERSKTLAEVKPILQATGFP---WHVVALEEVFSLPPSVLWCSAQELVGSEGAYKAAVDSFLQQQHVLGAGGGPGPTQGEEQPPQPPLDPQNLARPPAPAQTEALSQLFCSVRTLTAKEELLQTLRTHLILHMARAHGYSKVMTGDSCTRLAIKLMTNLALGRGAFLAWDTGFSDERHGDVVVVRPMRD 309
BLAST of DY304487 vs. ExPASy Swiss-Prot
Match: CTU2_RAT (Cytoplasmic tRNA 2-thiolation protein 2 OS=Rattus norvegicus GN=Ctu2 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.173e-13 Identity = 79/325 (24.31%), Postives = 123/325 (37.85%), Query Frame = 1 Query: 112 CQSG-CYKNEFERDLKPATETISDSNEQNLCVKCKANEPTPGAGEDGKHCLDCFRSNLFGKFRLAVASNALITPADNVLVAFSGGP-SSRVALQFVHELQQRAQKNFDASKDRSLPVFGVGVVFVDETAYYPVPSSEIDNAIQEIKLIVSNLSPPTKELHVIPIESIF---------------------------------------CSNPCDGR-----------------------ERFKKLVDSVSDATGKEDXXXXXXXXXXQKFASENGYNRLLLGLCTSRIACHVITATVKGRGYSFTADIQYADAR-WEIPVVLPLRD 891 CQ+G Y +R+ P S EQ CVKC P C DCF++ KFR + N +I P + VL+++SGGP SS + Q + L Q + K R +P GV++VDE A + + E+K I+ N P HV+ +E +F C++P G+ E +L S+ T KE+ A +GY +++ G +R+A ++T GRG D ++D R ++ +V P+RD Sbjct: 2 CQAGEDYAGPAQREPPPVPRP---SREQK-CVKCAEGLPVVVIRAGDAFCRDCFKAFYVHKFRAMLGKNRVIFPGEKVLLSWSGGPSSSSMVWQVLEGLSQDSAKRL-----RFVP----GVIYVDEGAACGQSLEDRVKTLAEVKRILGNTGFP---FHVVALEEVFSLPPSVLRRASQEPAGTEEAYKAAVDSFLQQQHVLGTEACASPAQGQGQLRPSHSQEPSGTVGHPKDAQTEALSRLFKSIKTLTAKEELLQTLRTHLTVHVARSHGYRKVMTGESCTRLAIKLMTNLALGRGAFLAWDTGFSDERHGDVVLVRPMRD 310
BLAST of DY304487 vs. ExPASy Swiss-Prot
Match: CTU2_BOVIN (Cytoplasmic tRNA 2-thiolation protein 2 OS=Bos taurus GN=CTU2 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 3.412e-13 Identity = 71/287 (24.74%), Postives = 110/287 (38.33%), Query Frame = 1 Query: 199 CVKCKANEPTPGAGEDGKHCLDCFRSNLFGKFRLAVASNALITPADNVLVAFSGGPSSRVALQFVHELQQRAQKNFDASKDRSLPVFGVGVVFVDETAYYPVPSSEIDNAIQEIKLIVSNLSPPTKELHVIPIESIFCSNP----CDGRE---------------------------------------------------RFKKLVDSVSDATGKEDXXXXXXXXXXQKFASENGYNRLLLGLCTSRIACHVITATVKGRGYSFTADIQYADAR-WEIPVVLPLRD 891 CVKCK P C DCF++ KFR + + LI P + VL+A+SGGPSS + V E R A + R +P GVV++DE A + + E+KL + P H + +E +F P C +E +L+DSV T KE+ A +GY++++ G +R+A ++T+ GRG D ++D R ++ VV P+R+ Sbjct: 28 CVKCKEGLPVVVIRAGDAFCRDCFKALYVHKFRAMLGKSRLIFPGEKVLLAWSGGPSSSSMVWQVLEGLSRD----SAKRLRFVP----GVVYIDEGAACGQSPEDRARTLAEVKLALQTTGFP---WHAVALEEVFSLPPSALRCSAQEAAGTEGAYKAAVDSFLQQQHALGTNGVERQSQHCAQDPQSPTGPPTTAQTQALSRLIDSVKTLTAKEELLQTLRTHLILHVARNHGYSKVMTGDSCTRLAIKLMTSLALGRGAFLAWDTGFSDERHGDVVVVRPMRE 303
BLAST of DY304487 vs. ExPASy Swiss-Prot
Match: CTU2_DANRE (Cytoplasmic tRNA 2-thiolation protein 2 OS=Danio rerio GN=ctu2 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 4.457e-13 Identity = 72/315 (22.86%), Postives = 122/315 (38.73%), Query Frame = 1 Query: 124 CYKNEFERDLKPATETISDSNEQNLCVKCKANEPTPGAGEDGKHCLDCFRSNLFGKFRLAVASNALITPADNVLVAFSGGPSSRVALQFVHE-LQQRAQKNFDASKDRSLPVFGVGVVFVDETAYYPVPSSEIDNAIQEIKLIVSNLSPPTKELHVIPIESIFC---------------SNPC------------------------------------DGRERFKKLVDSVSDATGKEDXXXXXXXXXXQKFASENGYNRLLLGLCTSRIACHVITATVKGRGYSFTADIQYADARW-EIPVVLPLRDCLAPEL 909 C E L+ E I S C+KCK C CF+ KFR + N +I P + VL+A SGG +S L V E L + A K K R +P G+V++D+ E +I ++K I + P ++P+E +F SNPC + + ++L S+ + K++ A EN Y+++++G SR+A +++ GRG + +D ++D R+ ++ +V P+RD + E+ Sbjct: 2 CQVEEDYNGLECNQEKIPVSGLNRKCMKCKEGTAVLIIRVSDAFCRSCFKEYFIHKFRAMLGKNRVIFPQEKVLLAVSGGAASCTMLSQVQEGLSRDAPK-----KLRFMP----GIVYIDDGGACGRSEDERQTSISQLKNIFTQTGFP---YFIVPLEKVFSLPTSVLVPGTFDPDPSNPCYKQAVDKYLKEKQKLREEEAVCAVAQLNLEDSAYLPEHKLALQRLFSSLKTLSAKQEMLQTLRQHLILHVARENSYSKVMMGESCSRLAVKLLSNIALGRGAALASDTGFSDPRFGDVVIVRPMRDYSSKEI 304 The following BLAST results are available for this feature:
BLAST of DY304487 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY304487 ID=DY304487; Name=DY304487; organism=Citrus clementina; type=EST; length=1270bpback to top |