DY304492
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY304492 vs. ExPASy Swiss-Prot
Match: LSG1_DANRE (Large subunit GTPase 1 homolog OS=Danio rerio GN=lsg1 PE=2 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 1.072e-48 Identity = 109/244 (44.67%), Postives = 149/244 (61.07%), Query Frame = 1 Query: 208 KNEKTGLGRALVKHHNHMIQETKEKGKFYRKQHKKV---------------LESVTDVNDIDAVIQQAEEAEAYPVPILLINLDEGSRSSTREMMMTAEERKEEEALHAGN---LRVPRRPPWNPSMSVEELDDNERQSFLAWRRSLARLEENEKLVLTPFEKNLDMWRQLWRVLERSDLIVMVVDARDPLFYRCPDLEAYAREIDEYKRTLLLVNKADLLPFSVRKRWAKYFKDHDILFVFWS 885 + E +GLGRAL+K E G+ YR+ + L+SVT+ + +D + AE A V L N+ + + R ++++EE + + LH N LR+PRRPPW+ S S E L E+ SFL WRR LARLEE +KL+LTPFE+NLD WRQLWRV+ERSD++V +VDAR+PL +RCPDLE Y +E+ +K +LL+NKADLL R+ WA+YF+ I VFWS Sbjct: 7 RGEGSGLGRALIK-------ERLNAGRGYRRNDTWLHTSELNDGYDWGRLNLQSVTEQSSLDDFLATAELAGTEFVAEKL-NI-KFVPAEARAGLLSSEESRRLKKLHEENKQLLRIPRRPPWDESTSPEVLQQTEKDSFLTWRRDLARLEEEQKLILTPFERNLDFWRQLWRVIERSDVVVQIVDARNPLLFRCPDLEKYVKEVSVHKVNMLLLNKADLLTREQRRAWARYFQKEGIRAVFWS 241
BLAST of DY304492 vs. ExPASy Swiss-Prot
Match: LSG1_HUMAN (Large subunit GTPase 1 homolog OS=Homo sapiens GN=LSG1 PE=1 SV=2) HSP 1 Score: 181.03 bits (458), Expect = 1.226e-44 Identity = 97/231 (41.99%), Postives = 138/231 (59.74%), Query Frame = 1 Query: 226 LGRALVKHHNHMIQETKEKGKFYRKQH--------KKVLESVTDVNDIDAVIQQAEEAEAYPVPILLINLDEGSRSSTREMMMTAEERKEEEALHAGN---LRVPRRPPWNPSMSVEELDDNERQSFLAWRRSLARLEENEKLVLTPFEKNLDMWRQLWRVLERSDLIVMVVDARDPLFYRCPDLEAYAREIDEYKRTLLLVNKADLLPFSVRKRWAKYFKDHDILFVFWS 885 LGRAL++H + + + + L+SVT+ + +D + AE A V L N+ + + R +++ EE + + LH N L +PRRP WN + + EEL E+ +FL WRR L RLEE +KL+LTPFE+NLD WRQLWRV+ERSD++V +VDAR+PL +RC DLE Y +E+D K ++L+NKADLL R WA YF+ D+ +FWS Sbjct: 12 LGRALMRHQTQRSRSHRHTDSWLHTSELNDGYDWGRLNLQSVTEQSSLDDFLATAELAGTEFVAEKL-NI-KFVPAEARTGLLSFEESQRIKKLHEENKQFLCIPRRPNWNQNTTPEELKQAEKDNFLEWRRQLVRLEEEQKLILTPFERNLDFWRQLWRVIERSDIVVQIVDARNPLLFRCEDLECYVKEMDANKENVILINKADLLTAEQRSAWAMYFEKEDVKVIFWS 240
BLAST of DY304492 vs. ExPASy Swiss-Prot
Match: LSG1_CHICK (Large subunit GTPase 1 homolog OS=Gallus gallus GN=LSG1 PE=2 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 3.568e-44 Identity = 102/241 (42.32%), Postives = 140/241 (58.09%), Query Frame = 1 Query: 202 MGKNEKTGLGRALVKHHN----------HMIQETKEKGKFYRKQHKKVLESVTDVNDIDAVIQQAEEAEAYPVPILLINLDEGSRSSTREMMMTAEERKEEEALHAGN---LRVPRRPPWNPSMSVEELDDNERQSFLAWRRSLARLEENEKLVLTPFEKNLDMWRQLWRVLERSDLIVMVVDARDPLFYRCPDLEAYAREIDEYKRTLLLVNKADLLPFSVRKRWAKYFKDHDILFVFWS 885 MGK TGLGR+L + H + E G R S + + ++ + AE A V L N+ S S R ++TA+E + LH N LR+PRRP W+ + S E+L ER+SFL WRR LA LEE +KL+LTPFE+NL+ WRQLWRV+ERSD++V +VDAR+PL +RC DLE+Y +E+ K ++L+NKADLL R WA++F+ + VFWS Sbjct: 1 MGKKRGTGLGRSLQRQRGSERRGASSWLHASEVVGESGPERR--------SAVEQSPLEEFLATAELAGTRFVAERL-NIQFVSAQS-RTGLLTAQEAQHVRQLHEENRQFLRIPRRPYWDRTTSSEDLKQAERESFLEWRRQLAHLEEEKKLILTPFERNLEFWRQLWRVIERSDIVVQIVDARNPLLFRCQDLESYVKEVSNDKENMILINKADLLSEEQRAAWAQFFEKEGVKVVFWS 231
BLAST of DY304492 vs. ExPASy Swiss-Prot
Match: LSG1_MACFA (Large subunit GTPase 1 homolog OS=Macaca fascicularis GN=LSG1 PE=2 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 4.660e-44 Identity = 97/231 (41.99%), Postives = 137/231 (59.31%), Query Frame = 1 Query: 226 LGRALVKHHNHMIQETKEKGKFYRKQH--------KKVLESVTDVNDIDAVIQQAEEAEAYPVPILLINLDEGSRSSTREMMMTAEERKEEEALHAGN---LRVPRRPPWNPSMSVEELDDNERQSFLAWRRSLARLEENEKLVLTPFEKNLDMWRQLWRVLERSDLIVMVVDARDPLFYRCPDLEAYAREIDEYKRTLLLVNKADLLPFSVRKRWAKYFKDHDILFVFWS 885 LGRAL++H + + + + L+SVT+ + +D + AE A V L N+ + + R +++ EE + + LH N L +PRRP WN + + EEL E+ +FL WRR L RLEE +KL+LT FE+NLD WRQLWRV+ERSD++V +VDAR+PL +RC DLE Y +EID K ++L+NKADLL R WA YF+ D+ +FWS Sbjct: 12 LGRALMRHQTQRSRSHRHTDSWLHTSELNDGYDWGRLNLQSVTEESSLDDFLATAELAGTEFVAEKL-NI-KFVPAEARTGLLSFEESQRIKKLHEENKQFLCIPRRPNWNKNTTPEELKQAEKDNFLEWRRQLVRLEEEQKLILTSFERNLDFWRQLWRVIERSDIVVQIVDARNPLLFRCEDLECYVKEIDASKENVILINKADLLTAEQRSAWATYFEKEDVKVIFWS 240
BLAST of DY304492 vs. ExPASy Swiss-Prot
Match: LSG1_RAT (Large subunit GTPase 1 homolog OS=Rattus norvegicus GN=Lsg1 PE=2 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 3.340e-42 Identity = 97/242 (40.08%), Postives = 138/242 (57.02%), Query Frame = 1 Query: 202 MGKNEKTG---LGRALVKHHNHMIQETKEKGKFYRKQH--------KKVLESVTDVNDIDAVIQQAEEAEAYPVPILLINLDEGSRSSTREMMMTAEERKEEEALHAGN---LRVPRRPPWNPSMSVEELDDNERQSFLAWRRSLARLEENEKLVLTPFEKNLDMWRQLWRVLERSDLIVMVVDARDPLFYRCPDLEAYAREIDEYKRTLLLVNKADLLPFSVRKRWAKYFKDHDILFVFWS 885 MG+ G LGR L++H + + + + L+SVT+ + ++ + AE A V L N+ + R +++ EE + + LH N L +PRRP W+ S EEL E+ +FL WRR L RLEE +KL+LTPFE+NLD WRQLWRV+ERSD++V +VDAR+PL +RC DLE Y +EID K ++L+NKADLL R WA +F+ + +FWS Sbjct: 1 MGRRRAPGGGSLGRVLIRHQTQRSRSHRHTDSWLHTSELNDGYDWGRLNLQSVTEQSSLEDFLATAELAGTEFVAEKL-NI-KFVPPEARTGLLSFEESQRIKRLHEENRQFLCIPRRPNWDRKTSPEELKQAEKDNFLKWRRQLVRLEEEQKLILTPFERNLDFWRQLWRVIERSDIVVQIVDARNPLLFRCEDLECYVKEIDAAKENVILINKADLLTAEQRVAWAVHFEKEGVKVIFWS 240
BLAST of DY304492 vs. ExPASy Swiss-Prot
Match: LSG1_BOVIN (Large subunit GTPase 1 homolog OS=Bos taurus GN=LSG1 PE=2 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 1.269e-41 Identity = 88/193 (45.60%), Postives = 123/193 (63.73%), Query Frame = 1 Query: 316 LESVTDVNDIDAVIQQAEEAEAYPVPILLINLDEGSRSSTREMMMTAEERKEEEALHAGN---LRVPRRPPWNPSMSVEELDDNERQSFLAWRRSLARLEENEKLVLTPFEKNLDMWRQLWRVLERSDLIVMVVDARDPLFYRCPDLEAYAREIDEYKRTLLLVNKADLLPFSVRKRWAKYFKDHDILFVFWS 885 L+SVT+ + +D + AE A V L N+ + R +++ EE + + LH N L +PRRP W+ S EEL E+ +FL WRR L LEE + L+LTPFE+NLD WRQLWRV+ERSD++V +VDAR+PL +RC DLE Y + ID+ K ++L+NKADLL R WA++FK ++ +FWS Sbjct: 50 LQSVTEQSSLDDFLATAELAGTEFVAEKL-NI-KFVPPEARTGLLSFEENQRIKKLHEENKQFLCIPRRPKWDQKTSPEELKQAEKDNFLEWRRQLVWLEEEQNLILTPFERNLDFWRQLWRVIERSDIVVQIVDARNPLLFRCEDLECYVKTIDDNKENVILINKADLLTAEQRSAWAEFFKKENVKVIFWS 240
BLAST of DY304492 vs. ExPASy Swiss-Prot
Match: LSG1_MOUSE (Large subunit GTPase 1 homolog OS=Mus musculus GN=Lsg1 PE=2 SV=2) HSP 1 Score: 169.474 bits (428), Expect = 3.693e-41 Identity = 89/193 (46.11%), Postives = 123/193 (63.73%), Query Frame = 1 Query: 316 LESVTDVNDIDAVIQQAEEAEAYPVPILLINLDEGSRSSTREMMMTAEERKEEEALHAGN---LRVPRRPPWNPSMSVEELDDNERQSFLAWRRSLARLEENEKLVLTPFEKNLDMWRQLWRVLERSDLIVMVVDARDPLFYRCPDLEAYAREIDEYKRTLLLVNKADLLPFSVRKRWAKYFKDHDILFVFWS 885 L+SVT+ + ++ + AE A V L N+ + R +++ EE + + LH N L +PRRP W+ S EEL E+ +FL WRR L RLEE +KL+LTPFE+NLD WRQLWRV+ERSD++V +VDAR+PL +RC DLE Y +EID K ++L+NKADLL R WA +F+ + +FWS Sbjct: 50 LQSVTEQSSLEDFLATAELAGTEFVAEKL-NI-KFVPPEARTGLLSFEESQRIKKLHEENRQFLCIPRRPNWDRKTSPEELKQAEKDNFLKWRRQLVRLEEEQKLILTPFERNLDFWRQLWRVIERSDIVVQIVDARNPLLFRCEDLECYVKEIDAAKENVILINKADLLTAEQRFAWAVHFEKEGVKVIFWS 240
BLAST of DY304492 vs. ExPASy Swiss-Prot
Match: LSG1_YEAST (Large subunit GTPase 1 OS=Saccharomyces cerevisiae GN=LSG1 PE=1 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 8.226e-41 Identity = 95/200 (47.50%), Postives = 127/200 (63.50%), Query Frame = 1 Query: 316 LESVTDVNDIDAVIQQAEEAEAYPVP-----ILLINLDEGSRSSTRE-MMMTAEERKEEEALH---AGNLRVPRRPPWNPSMSVEELDDNERQSFLAWRRSLARLEE-NEKLVLTPFEKNLDMWRQLWRVLERSDLIVMVVDARDPLFYRCPDLEAYAREIDEYKRTLLLVNKADLLPFSVRKRWAKYFKDHDILFVFWS 885 L SVT + +D + A A+ + +I +D G+ S+T + MT E+R A A +L VPRRP WN MS +LD E+++FL WRR LA L+E NE L+LTPFE+N+++W+QLWRV+ERSDL+V +VDAR+PL +R DLE Y +E D+ K LLLVNKADLL R WAKYF +I F F+S Sbjct: 65 LRSVTQESALDEFLSTAALADKDFTADRHSNVKIIRMDSGNDSATSQGFSMTNEQRGNLNAKQRALAKDLIVPRRPEWNEGMSKFQLDRQEKEAFLEWRRKLAHLQESNEDLLLTPFERNIEVWKQLWRVVERSDLVVQIVDARNPLLFRSVDLERYVKESDDRKANLLLVNKADLLTKKQRIAWAKYFISKNISFTFYS 264
BLAST of DY304492 vs. ExPASy Swiss-Prot
Match: LSG1_DROME (Large subunit GTPase 1 homolog OS=Drosophila melanogaster GN=ns3 PE=1 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 4.083e-40 Identity = 100/247 (40.49%), Postives = 141/247 (57.09%), Query Frame = 1 Query: 202 MGKNEKTG---LGRALVKHH----------NHMIQETKEKGKFYRKQHKKVLESVTDVNDIDAVIQQAE----EAEAYPVPILLINLDE--GSRSSTREMMMTAEERKEEEALHAGNLRVPRRPPWNPSMSVEELDDNERQSFLAWRRSLARLEENEKLVLTPFEKNLDMWRQLWRVLERSDLIVMVVDARDPLFYRCPDLEAYAREIDEYKRTLLLVNKADLLPFSVRKRWAKYFKDHDILFVFWS 885 MGK K G LGR L+K N + T E Y + L SVT+ + A ++ AE E +A + I +N + G S T+E M +K +E H L++PRRP W S EEL E ++FL WRR LA L+E+E++++TP+EKNL+ WRQLWRV+ERSD++V +VDAR+PL +R DLE Y +E++ K ++LVNK+DLL R+ WA+YF I F+S Sbjct: 1 MGKKNKGGAPNLGRQLIKDRFGHTQRRKVDNDTMLHTTELQDGY-DWGRLNLSSVTEESSFQAFLRTAELAGTEFQAEKLNITFVNPKQRVGLLSKTQEQRM---HQKHDE--HRDQLKIPRRPKWTKETSAEELVRAENEAFLDWRRDLALLQEDEEILMTPYEKNLEFWRQLWRVVERSDVVVQIVDARNPLLFRSADLERYVKEVEPSKMNMILVNKSDLLTEEQRRHWAEYFDSEGIRTAFYS 241
BLAST of DY304492 vs. ExPASy Swiss-Prot
Match: LSG1_SCHPO (Large subunit GTPase 1 OS=Schizosaccharomyces pombe GN=lsg1 PE=2 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 6.964e-40 Identity = 90/228 (39.47%), Postives = 135/228 (59.21%), Query Frame = 1 Query: 223 GLGRAL----VKHHNHMIQETKEKGKFYRKQHKKVLESVTDVNDIDAVIQQAEEAEAYPVPILLINLDEGSRSSTREMMMTAEER---KEEEALHAGNLRVPRRPPWNPSMSVEELDDNERQSFLAWRRSLARLEENEKLVLTPFEKNLDMWRQLWRVLERSDLIVMVVDARDPLFYRCPDLEAYAREIDEYKRTLLLVNKADLLPFSVRKRWAKYFKDHDILFVFWS 885 GLGRA+ K+ + K K H+ L SVT D+D + AE E + N+ +++ EE K+++ + L +PRRP W+ + + ELD ER+SFL WRR+LA+L++ E ++TPFE+NL++WRQLWRV+ERSD++V +VDAR+PLF+R LE Y +E+ K+ LLVNKAD+L R W+ YF +++I F+F+S Sbjct: 11 GLGRAIQSDFTKNRRNRKGGLKHIVDSDPKAHRAALRSVTHETDLDEFLNTAELGEVEFIAEKQ-NVTVIQNPEQNPFLLSKEEAARSKQKQEKNKDRLTIPRRPHWDQTTTAVELDRMERESFLNWRRNLAQLQDVEGFIVTPFERNLEIWRQLWRVIERSDVVVQIVDARNPLFFRSAHLEQYVKEVGPSKKNFLLVNKADMLTEEQRNYWSSYFNENNIPFLFFS 237 The following BLAST results are available for this feature:
BLAST of DY304492 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >DY304492 ID=DY304492; Name=DY304492; organism=Citrus clementina; type=EST; length=1223bpback to top |