DY304500

Overview
NameDY304500
Unique NameDY304500
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1281
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY304500 vs. ExPASy Swiss-Prot
Match: OPD22_ARATH (Dihydrolipoyllysine-residue acetyltransferase component 2 of pyruvate dehydrogenase complex, mitochondrial OS=Arabidopsis thaliana GN=At3g13930 PE=1 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 2.813e-23
Identity = 71/181 (39.23%), Postives = 98/181 (54.14%), Query Frame = 3
Query:  156 REIFMPALSSTMTEGKIVSWVRSEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEGG-VASVGSAIALLAESEDEIXXXXXXXXXXXXXXXXXXXXXXXXXVVAAVPHPQLEK-VKLAEPAAVTVGSAVHPASEGGK-RIVASPYAKKLANELKVELARVVGSGPKGRIVAKDVE 689
            +EI MP+LS TMTEG I  W++ EGDK+  GE +  VE+DKA +++E   +G+LAKI+ +EG     VG  IA+  E ED+I                            A P P L K  K+ +PA+        P+S   + RI ASP A+KLA +  V L+ + G+GP+GRIV  DVE
Sbjct:  112 QEIGMPSLSPTMTEGNIARWLKKEGDKVAPGEVLCEVETDKATVEMECMEEGFLAKIVKEEGAKEIQVGEVIAITVEDEDDI----------QKFKDYTPSSDTGPAAPEAKPAPSLPKEEKVEKPASAPEAKISKPSSAPSEDRIFASPLARKLAEDNNVPLSSIKGTGPEGRIVKADVE 282          
BLAST of DY304500 vs. ExPASy Swiss-Prot
Match: ODP2_RHIME (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Rhizobium meliloti GN=pdhC PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 9.048e-22
Identity = 84/259 (32.43%), Postives = 115/259 (44.40%), Query Frame = 3
Query:  162 IFMPALSSTMTEGKIVSWVRSEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEG--GVASVGSAIALLAESEDEIXXXXXXXXXXXXXXXXXXXXXXXXXVVAAVPHPQLEKVKLAEPAAVTVGSAVHPASEGGKRIVASPYAKKLANELKVELARVVGSGPKGRIVAKDVEXXXXXXXXXXXXXXXXXXXXIELA-----------------SVVPFTTMQGAVSKNMVES-LAVPTFRVGNTITTEALDAL 878
            I MPALS TM EG +  W+  EGDK+  G+ +  +E+DKA M+VE   +G +AKI+V  G  GV  V + IA+LA   +++                           AA P P       A  AA     A  PA   GKRI +SP A++LA E  ++L+ + GSGP GR+V KDVE                      LA                  +VP   M+  ++K +VES   +P F V      +AL AL
Sbjct:    5 ITMPALSPTMEEGNLAKWLVKEGDKVKSGDVIAEIETDKATMEVEAVDEGTVAKIVVPAGTEGV-KVNALIAVLAAEGEDVATAAKGGNGAAGAVPAPKPKETAETAPAAAPAPAAAP---APQAAAPASPA--PADGEGKRIFSSPLARRLAKEAGIDLSAIAGSGPHGRVVKKDVETAVSGGAAKPAGAPAAAPAPATLAKGMSEDAVLKLFEPGSYELVPHDGMRKTIAKRLVESKQTIPHFYVSVDCELDALMAL 257          
BLAST of DY304500 vs. ExPASy Swiss-Prot
Match: OPD23_ARATH (Dihydrolipoyllysine-residue acetyltransferase component 3 of pyruvate dehydrogenase complex, mitochondrial OS=Arabidopsis thaliana GN=At1g54220 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.543e-21
Identity = 66/180 (36.67%), Postives = 97/180 (53.89%), Query Frame = 3
Query:  156 REIFMPALSSTMTEGKIVSWVRSEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEGG-VASVGSAIALLAESEDEIXXXXXXXXXXXXXXXXXXXXXXXXXVVAAVPHPQLEKVKLAEPAAVTVGSAVHPAS-EGGKRIVASPYAKKLANELKVELARVVGSGPKGRIVAKDVE 689
            +EI MP+LS TMTEG I  W++ EGDK+  GE +  VE+DKA +++E   +GYLAKI+  EG     VG  IA+  E E++I                              P P  E+ K+ +P++     A  P++   G R+ ASP A+KLA +  V L+ + G+GP+GRIV  D++
Sbjct:  112 QEIGMPSLSPTMTEGNIARWLKKEGDKVAPGEVLCEVETDKATVEMECMEEGYLAKIVKAEGSKEIQVGEVIAITVEDEEDIGKFKDYTPSSTADAAPTK--------AEPTPAPPKEE-KVKQPSSPPEPKASKPSTPPTGDRVFASPLARKLAEDNNVPLSDIEGTGPEGRIVKADID 282          
BLAST of DY304500 vs. ExPASy Swiss-Prot
Match: ODP2_MOUSE (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Mus musculus GN=Dlat PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 1.106e-19
Identity = 62/178 (34.83%), Postives = 93/178 (52.25%), Query Frame = 3
Query:  159 EIFMPALSSTMTEGKIVSWVRSEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEG-GVASVGSAIALLAESEDEIXXXXXXXXXXXXXXXXXXXXXXXXXVVAAVPHPQLEKVKLAEPAAVTVGSAVHPASEGGKRIVASPYAKKLANELKVELARVVGSGPKGRIVAKDVE 689
            +I +PALS TMT G +  W +  G+KL +G+ +  +E+DKA +  E   +GYLAKI+V EG     +G+ + ++ E +++I                         V A  P PQ        P A T  +A  PA   G R+  SP AKKLA E  ++L +V G+GP+GRI+ KD++
Sbjct:  219 QIVLPALSPTMTMGTVQRWEKKVGEKLSEGDLLAEIETDKATIGFEVQEEGYLAKILVPEGTRDVPLGAPLCIIVEKQEDIAAFADYRPTEVTSLKPQAAPPAPPPVAAVPPTPQ--------PVAPTPSAA--PAGPKG-RVFVSPLAKKLAAEKGIDLTQVKGTGPEGRIIKKDID 385          
BLAST of DY304500 vs. ExPASy Swiss-Prot
Match: ODP2_RAT (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus GN=Dlat PE=1 SV=3)

HSP 1 Score: 97.4413 bits (241), Expect = 1.887e-19
Identity = 62/178 (34.83%), Postives = 93/178 (52.25%), Query Frame = 3
Query:  159 EIFMPALSSTMTEGKIVSWVRSEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEG-GVASVGSAIALLAESEDEIXXXXXXXXXXXXXXXXXXXXXXXXXVVAAVPHPQLEKVKLAEPAAVTVGSAVHPASEGGKRIVASPYAKKLANELKVELARVVGSGPKGRIVAKDVE 689
            +I +PALS TMT G +  W +  G+KL +G+ +  +E+DKA +  E   +GYLAKI+V EG     +G+ + ++ E +++I                         V A  P PQ        P A T  +A  PA   G R+  SP AKKLA E  ++L +V G+GP+GRI+ KD++
Sbjct:  210 QIVLPALSPTMTMGTVQRWEKKVGEKLSEGDLLAEIETDKATIGFEVQEEGYLAKILVPEGTRDVPLGTPLCIIVEKQEDIAAFADYRPTEVTSLKPQAPPPVPPPVAAVPPIPQ--------PLAPTPSAA--PAGPKG-RVFVSPLAKKLAAEKGIDLTQVKGTGPEGRIIKKDID 376          
BLAST of DY304500 vs. ExPASy Swiss-Prot
Match: ODP2_CAEEL (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Caenorhabditis elegans GN=F23B12.5 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 5.489e-19
Identity = 69/242 (28.51%), Postives = 110/242 (45.45%), Query Frame = 3
Query:  150 KIREIFMPALSSTMTEGKIVSWVRSEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEGGV-ASVGSAIALLAESEDEIXXXXXXXXXXXXXXXXXXXXXXXXXVVAAVPHPQLEKVKLAEPAAVTVGSAVHPASEGGKRIVASPYAKKLANELKVELARVVGSGPKGRIVAKDVEXXXXXXXXXXXXXXXXXXXXIELASVVPFTTMQGAVSKNMVESLA-VPTFRVGNTITTEAL 869
            K   + +PALS TM  G +VSW + EGD+L +G+ +  +E+DKA M  ET  +GYLAKI++ EG     +G  + ++ ++E ++                                 Q         A     SA  P S  G R+ ASP+AKKLA E  ++L+ V GSGP GRI+A D+                      +    +P + M+  ++K + ES + +P + + + I  + L
Sbjct:   76 KHNRVALPALSPTMELGTVVSWQKKEGDQLSEGDLLCEIETDKATMGFETPEEGYLAKILIQEGSKDVPIGKLLCIIVDNEADVAAFKDFKDDGASSGGSAPAAEKAPEPAKPAASSQPSPPAQMYQAPSVPKSAPIPHSSSG-RVSASPFAKKLAAENGLDLSGVSGSGPGGRILASDLSQAPAKGATSTTTQAVSGQDYTD----IPLSNMRKTIAKRLTESKSTIPHYYLTSEIQLDTL 312          
BLAST of DY304500 vs. ExPASy Swiss-Prot
Match: ODP2_HUMAN (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Homo sapiens GN=DLAT PE=1 SV=3)

HSP 1 Score: 95.1301 bits (235), Expect = 9.363e-19
Identity = 63/180 (35.00%), Postives = 91/180 (50.56%), Query Frame = 3
Query:  159 EIFMPALSSTMTEGKIVSWVRSEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEG-GVASVGSAIALLAESEDEIXXXXXXXXXXXXXXXXXXXXXXXXXVVAAVPHPQLEKVKLAEPAAVTVGSAVHPASEGGK--RIVASPYAKKLANELKVELARVVGSGPKGRIVAKDVE 689
            ++ +PALS TMT G +  W +  G+KL +G+ +  +E+DKA +  E   +GYLAKI+V EG     +G+ + ++ E E +I                         V A  P PQ        P A T  SA  PA+  G   R+  SP AKKLA E  ++L +V G+GP GRI  KD++
Sbjct:  220 QVLLPALSPTMTMGTVQRWEKKVGEKLSEGDLLAEIETDKATIGFEVQEEGYLAKILVPEGTRDVPLGTPLCIIVEKEADISAFADYRPTEVTDLKPQVPPPTPPPVAAVPPTPQ--------PLAPT-PSAPCPATPAGPKGRVFVSPLAKKLAVEKGIDLTQVKGTGPDGRITKKDID 390          
BLAST of DY304500 vs. ExPASy Swiss-Prot
Match: ODP2_YEAST (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Saccharomyces cerevisiae GN=PDA2 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.223e-18
Identity = 70/183 (38.25%), Postives = 89/183 (48.63%), Query Frame = 3
Query:  162 IFMPALSSTMTEGKIVSWVRSEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEGGV-ASVGSAIALLAESEDEIXXXXXXXXXXXXXXXXXXXXXXXXXVVAAVPHPQLEKVKLAEPAAVTVGSAVH------PASEGGKRIVASPYAKKLANELKVELARVVGSGPKGRIVAKDVE 689
            I MPALS TMT+G + +W + EGD+L  GE +  +E+DKA MD E   DGYLAKI+V EG     V   IA+  E + ++                           A    PQ EK K   PA  T  SA         A +G  RI ASP AK +A E  + L  V G+GP+GRI   D+E
Sbjct:   37 IGMPALSPTMTQGNLAAWTKKEGDQLSPGEVIAEIETDKAQMDFEFQEDGYLAKILVPEGTKDIPVNKPIAVYVEDKADV-------PAFKDFKLEDSGSDSKTSTKAQPAEPQAEK-KQEAPAEETKTSAPEAKKSDVAAPQG--RIFASPLAKTIALEKGISLKDVHGTGPRGRITKADIE 209          
BLAST of DY304500 vs. ExPASy Swiss-Prot
Match: ODP2_RICFE (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Rickettsia felis GN=pdhC PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.597e-18
Identity = 76/240 (31.67%), Postives = 103/240 (42.92%), Query Frame = 3
Query:  159 EIFMPALSSTMTEGKIVSWVRSEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEGGV-ASVGSAIALLAESEDEIXXXXXXXXXXXXXXXXXXXXXXXXXVVAAVPHPQLEKVKLAEPAAVTVGSAVHPASEGGKRIVASPYAKKLANELKVELARVVGSGPKGRIVAKDVEXXXXXXXXXXXXXXXXXXXXIELASVVPFTTMQGAVSKNMVESLAVPTFRVGNTITTEALDA 875
            +I MP LS TMTEG +  W++ EGDK+  GE +  +E+DKA M+VE   +G LAKI++ +      V S IA+L+E  +E                            A +P P     K+ E  AV      H AS    +I ASP AK+LA    + L  V GSGP GRIV +D+                         S  P T     VS+N  E   VP   +   I    L++
Sbjct:    4 KILMPVLSPTMTEGNLARWLKKEGDKVNPGEVIAEIETDKATMEVEAVDEGILAKIVIPQNSQNVPVNSLIAVLSEEGEE-------KTDIDAFIAKNNNVSPSPKTDANLPKPHENIAKVEEQVAV----IKHDAS----KIFASPLAKRLAKMGNIRLESVKGSGPHGRIVKQDI------------------------LSYTPSTVHNKIVSRNPEEYRLVPNNNIRKIIAKRLLES 204          
BLAST of DY304500 vs. ExPASy Swiss-Prot
Match: ODP2_RICBR (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Rickettsia bellii (strain RML369-C) GN=pdhC PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 7.926e-18
Identity = 57/177 (32.20%), Postives = 85/177 (48.02%), Query Frame = 3
Query:  159 EIFMPALSSTMTEGKIVSWVRSEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEGGV-ASVGSAIALLAESEDEIXXXXXXXXXXXXXXXXXXXXXXXXXVVAAVPHPQLEKVKLAEPAAVTVGSAVHPASEGGKRIVASPYAKKLANELKVELARVVGSGPKGRIVAKDV 686
            ++ MPALS TMTEG +  W++ EGDK+  GE +  +E+DKA M+VE   +G LAKI++ +G     V S IA+L E  +E+                          +A              P  V   +    + +   ++ ASP AK+LA    V +  + GSGP GRI+ +DV
Sbjct:    4 KLLMPALSPTMTEGNLARWLKKEGDKINPGEVIAEIETDKATMEVEAVDEGTLAKIIIPQGSQNVPVNSLIAVLIEEGEELSGIEEFIAKNNSNSPKKEEISKPAETIA--------------PQNVKEENITTASDQNNIKVFASPLAKRLAKIQNVRIEEIKGSGPHGRIIKQDV 166          
The following BLAST results are available for this feature:
BLAST of DY304500 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
OPD22_ARATH2.813e-2339.23Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_RHIME9.048e-2232.43Dihydrolipoyllysine-residue acetyltransferase comp... [more]
OPD23_ARATH1.543e-2136.67Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_MOUSE1.106e-1934.83Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_RAT1.887e-1934.83Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_CAEEL5.489e-1928.51Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_HUMAN9.363e-1935.00Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_YEAST1.223e-1838.25Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_RICFE1.597e-1831.67Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_RICBR7.926e-1832.20Dihydrolipoyllysine-residue acetyltransferase comp... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAQ8YO02RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304500 ID=DY304500; Name=DY304500; organism=Citrus clementina; type=EST; length=1281bp
CCAAAGTCACACACTTAAGAGCTTAAAAATCATCGCCAAAAATGGCTCAC
CTTCTCCAAACAACCTTTCTTCCTTCTTCGTCCCCGTTAATTCGGCAAAA
CCAGACGTACATTCTCCGGATTTCAGGCTCCAGGACCCGAGTGAACGCCA
AGATCCGCGAAATCTTCATGCCCGCTTTGAGCTCCACCATGACCGAAGGC
AAGATCGTTTCGTGGGTCAGGTCCGAGGGAGACAAGCTCTGCAAAGGCGA
AAGCGTTGTCGTTGTTGAGTCCGATAAGGCCGACATGGATGTCGAGACGT
TTTACGATGGCTACCTCGCTAAAATCATGGTCGATGAAGGCGGTGTCGCT
TCCGTCGGCTCCGCCATCGCTTTGTTGGCTGAGTCAGAGGATGAAATTGC
CGAGGCTCAAGCTAAGGCTGCTGCCAGTGGGTCTCCTTCATCGCCTGCAT
CGGAGACATCGAATAGTGCAGCTGTTGTCGCCGCCGTTCCACACCCACAG
CTGGAGAAAGTAAAACTTGCAGAACCTGCGGCGGTTACGGTGGGGTCCGC
GGTGCATCCGGCGTCGGAGGGAGGGAAGAGGATAGTGGCTTCACCGTATG
CGAAGAAATTGGCGAATGAATTGAAGGTGGAGCTGGCCAGAGTAGTGGGG
AGTGGGCCCAAGGGGAGGATTGTGGCCAAAGATGTAGAGGCGGCGGCGGC
GGCGGCAGCTGGTCCGGCGGCTTCTGTGGCGGCGGCTGGTCCGGCAGGTA
TTGAGCTGGCAAGTGTGGTGCCTTTTACAACCATGCAGGGGGCTGTTAGT
AAAAACATGGTGGAAAGTTTAGCTGTTCCTACTTTCAGAGTTGGTAACAC
CATTACTACCGAAGCACTTGATGCTTTGTAAAAAAAGATCCAGTCCAAGG
GAGTTACAATGACACCACTAATGGGCAAAGGCAACACACCTTGCTTTGGT
TTACCTTCCGGTTTTGAATTCCATTTTGTAAAAACGGTAAAAACCTTTAA
CCACCAAAAGTAACCTTAAAAATTGGCGGGTGGCGGGGGGCAAAAGAAGG
GGGGGGTTGATAACCCCCAGGGCTTCTCGGGAGGCCGAAAAAAGGGGGAC
CAACCTCAAACTTTATATACAAAAAAAGGGGGGAAGGGGGGATTTGGGAA
AAAAAGAGGGGCCCCCGGGGCCCACCCGGTTGTTGGCCCCCCCCCTCATA
AAGAAATACAAAAAAAAAAGAGAGAAAACCTATTTTCCCACCCCCCCCCC
CCCCAACACCCTTCGCTTGGGGGGGGAGGAG
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