DY304502

Overview
NameDY304502
Unique NameDY304502
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1277
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY304502 vs. ExPASy Swiss-Prot
Match: DOM3Z_ARATH (Protein Dom3z homolog, chloroplastic OS=Arabidopsis thaliana GN=At4g17620 PE=1 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 7.846e-42
Identity = 91/163 (55.83%), Postives = 105/163 (64.42%), Query Frame = 1 
Query:  424 KDLFGSDNEAYCRTSAISPYPIPVLPVVXXXXXXXXXXXXXXXXWPNDRGGVGILXXXXXXXXXXXXX--HGSRFSNGRQDERFVSEFKLSRSEETLSRKVVAFQEPCELAQYSRVEGGDVYFDDPSLRLFKRLISEDVGADLNEGFDTFIEKKDLGS*GIGD 906
            KDLFGSDNE Y +T AIS Y IPVLP                  W N RGG G+L                G R+ N ++DERFVSE KLS+S+ETL+RK   FQEPCEL  YSRVEGG+V +DD  LRLFKR I E++GADLN+G+DTFIEKKDLGS G GD
Sbjct:  114 KDLFGSDNEEYTKTPAISTYSIPVLPAGWSNDNHGGRGGMGRGRWSNGRGGPGLLPRPGPYPGRGGNRGGFGGRYQNYQRDERFVSELKLSKSKETLARKQTNFQEPCELTCYSRVEGGEVIYDDQGLRLFKRHIGEEIGADLNQGYDTFIEKKDLGSEGFGD 276
The following BLAST results are available for this feature:
BLAST of DY304502 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
DOM3Z_ARATH7.846e-4255.83Protein Dom3z homolog, chloroplastic OS=Arabidopsi... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAQ8YO05RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304502 ID=DY304502; Name=DY304502; organism=Citrus clementina; type=EST; length=1277bp
AACAATCTCTCAATCGTTCACCCAAAAACCTCAATGGATTTCCCGGACCA
AGACGTGGATGTTTTCGGGGAGGAATACGGAAACAACCACGAACTAGAAG
GCGGAACCCACGAGTCGTCGGCTTCCTCATCGTCTTCATCCTCCTCTACC
TCATCATCACGATCGTCGTCATCATCGGCGTCGTCTTCTTCAAACGGCAG
TGGTGGGGGAGAGTCCAGCAGCGCCAGTGGAAGCGCAAGCAGCGGAGGAG
GAGCTGCTGGATTAGGAGTAGAAGGAGGAGGAGAAGAAGAGAGTGGAGAG
GAAGTAGAGAATACTCTTAATTTGAATAGCAAAAATTACGAAGATTATAA
TTATAATCATACTAGGGACCTTTTTGGTGATGACGACGACGACGACGAAG
TAGTAGTAGTCGAAGAAGATGATAAAGATCTGTTCGGTTCTGATAATGAA
GCTTACTGTAGAACCTCTGCCATTAGCCCTTACCCTATCCCTGTATTGCC
TGTTGTACGCAATAATAACAACCATGGTGGACGAGGGGGTTTTGGACGTG
GTCGATGGCCAAATGATAGAGGAGGTGTGGGCATTCTTCCTCGACCTGGA
TATCCTCCAAGGCAGGGAGGTTATGGCCATGGCTCAAGATTCTCAAATGG
TCGCCAGGATGAACGATTTGTTTCTGAATTTAAGCTTTCAAGGAGTGAAG
AAACTTTGTCTAGAAAAGTTGTTGCTTTTCAAGAGCCATGTGAGCTTGCA
CAATATAGTCGAGTAGAAGGTGGTGATGTCTACTTCGATGATCCCAGCTT
GAGGCTTTTCAAACGTCTCATTTCTGAGGATGTTGGAGCTGATCTAAATG
AAGGTTTTGATACTTTTATTGAGAAAAAAGATTTGGGCTCTTGAGGGATT
GGCGACTTTGCTTTCTTGCCTAAGAAACCGAAATAATCCCCCTTTCAAAA
AATGCATTTTGGGGACTTTCCCGTAACAATCCTAAAAAGAAAACAAGCCT
ACCTGTTATTATCCCAAATGAAGGCTGGGGCCTAGGGAGTCCCTTAAAAG
GGAATGGGGGTTCCTCTTTTTCTGGTGTGTGCCAAAAGGAACAAAAAAAA
GGCCCAAAAAAGGTGATTTTGGAATCCCCCCAAAAAAGTTTTATGCGGGG
GGTTATTTTTTTTTCCAGAGGAACCCTTTCCCCCCTCGAAAAATCCTCCC
CAAAAAAAAAACTGTAGCCGAGAAAAAAAAAAGGGAAAATATCTCCCCCC
TATATTTTTTGTGTGTCCCCCACAAAT
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