DY304564
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY304564 vs. ExPASy Swiss-Prot
Match: MSRA_BRANA (Peptide methionine sulfoxide reductase OS=Brassica napus GN=PMSR PE=2 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 1.288e-57 Identity = 103/137 (75.18%), Postives = 117/137 (85.40%), Query Frame = 1 Query: 184 FPITARPISTHYKPPMNILNKLGFGFRPSPDPASTENSAIAQGPDDDVPAPGQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTTLNRQ 594 FP TAR IS + P N+ +LGFG RP PDPA++ SAIAQGPDDDVP+PGQQFAQFGAGCFWG ELA+QRVPGVTKTEVGYS G++ NP+YEDVCS TT HNE+VRVQYDPKE SF++LLD+FW RHDPTTLNRQ Sbjct: 40 FPKTARSISVYKSPMNNLFTRLGFGSRPQPDPAAS--SAIAQGPDDDVPSPGQQFAQFGAGCFWGAELAYQRVPGVTKTEVGYSHGFVDNPTYEDVCSETTGHNEIVRVQYDPKEVSFESLLDVFWKRHDPTTLNRQ 174
BLAST of DY304564 vs. ExPASy Swiss-Prot
Match: MSRA_ARATH (Peptide methionine sulfoxide reductase OS=Arabidopsis thaliana GN=PMSR PE=1 SV=2) HSP 1 Score: 221.861 bits (564), Expect = 3.748e-57 Identity = 105/140 (75.00%), Postives = 118/140 (84.29%), Query Frame = 1 Query: 184 FPITAR-PISTHYKPPMNILNKLGFGFRPSPDPASTENSAIAQGPDDDVPAPGQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTTLNRQVG 600 FP T+R PIS + P N+ N+LGFG RP A ++AIAQGPDDDVP+ GQQFAQFGAGCFWGVELA+QRVPGVTKTEVGYS G +HNPSYEDVC+GTT HNEVVRVQYDPKECSF++LLD+FW RHDPTTLNRQ G Sbjct: 39 FPQTSRRPISVYKSPMNNLFNRLGFGSRPQAQ-ADPSSAAIAQGPDDDVPSSGQQFAQFGAGCFWGVELAYQRVPGVTKTEVGYSHGIVHNPSYEDVCTGTTGHNEVVRVQYDPKECSFESLLDVFWNRHDPTTLNRQGG 177
BLAST of DY304564 vs. ExPASy Swiss-Prot
Match: MSRA_LACSA (Peptide methionine sulfoxide reductase OS=Lactuca sativa PE=2 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 6.617e-54 Identity = 101/143 (70.63%), Postives = 119/143 (83.22%), Query Frame = 1 Query: 184 FPITA-RPI-----STHYKPPMNILNKLGFGFRPSPDPASTENSAIAQGPDDDVPAPGQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTTLNRQ 594 FP+T+ +P+ S+ M+ L +LG G R +P AS + S+IAQGPDDD+PAPGQQFAQFGAGCFWGVELAFQRVPGV+KTEVGY+QG+LHNP+Y D+CSGTTNH+EVVRVQYDPK CSFD+LLD FW RHDPTTLNRQ Sbjct: 35 FPVTSTKPLFTLRHSSSTPKIMSWLGRLGXGTR-TPADASMDQSSIAQGPDDDIPAPGQQFAQFGAGCFWGVELAFQRVPGVSKTEVGYTQGFLHNPTYNDICSGTTNHSEVVRVQYDPKACSFDSLLDCFWERHDPTTLNRQ 176
BLAST of DY304564 vs. ExPASy Swiss-Prot
Match: MSRA_SOLLC (Peptide methionine sulfoxide reductase (Fragment) OS=Solanum lycopersicum GN=E4 PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 2.001e-34 Identity = 68/105 (64.76%), Postives = 81/105 (77.14%), Query Frame = 1 Query: 283 STENSAIAQGPDDDVP-APGQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTTLNRQ 594 ST N A+ PD D P PG +FAQF AGCFWGVELAFQRV GV KTEVGYSQG +H+P+Y+ +CSGTT H E +R+Q+DP C + LL +FW+RHDPTTLNRQ Sbjct: 10 STTNPAL--DPDLDSPDQPGLEFAQFAAGCFWGVELAFQRVGGVVKTEVGYSQGNVHDPNYKLICSGTTEHAEAIRIQFDPNVCPYSNLLSLFWSRHDPTTLNRQ 112
BLAST of DY304564 vs. ExPASy Swiss-Prot
Match: MSRA_FRAAN (Peptide methionine sulfoxide reductase OS=Fragaria ananassa PE=2 SV=2) HSP 1 Score: 145.591 bits (366), Expect = 3.414e-34 Identity = 66/107 (61.68%), Postives = 80/107 (74.77%), Query Frame = 1 Query: 280 ASTENSAIAQGPDDDVPAPGQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTTLNRQVG 600 +ST N+ D PG + AQF +GCFWG EL FQRV GV KTEVGYSQG++H+P+Y VCSGTTNH+EVVRVQ+DP+ C + LL +FW+RHDPTTLNRQ G Sbjct: 3 SSTTNNPALDLDSDTPENPGHELAQFASGCFWGSELRFQRVVGVIKTEVGYSQGHVHDPNYRLVCSGTTNHSEVVRVQFDPQVCPYSDLLSVFWSRHDPTTLNRQGG 109
BLAST of DY304564 vs. ExPASy Swiss-Prot
Match: MSRA_METTH (Peptide methionine sulfoxide reductase msrA OS=Methanobacterium thermoautotrophicum GN=msrA PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.300e-25 Identity = 52/82 (63.41%), Postives = 61/82 (74.39%), Query Frame = 1 Query: 349 AQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTTLNRQ 594 A FGAGCFWGVE AF++V GV T VGY G+L NP+YEDVC+G T H EVV V +DP + LLD+FW+ HDPTTLNRQ Sbjct: 10 ATFGAGCFWGVEDAFRKVDGVVSTRVGYMGGHLENPTYEDVCTGLTGHAEVVEVTFDPDVVGYSDLLDVFWSIHDPTTLNRQ 91
BLAST of DY304564 vs. ExPASy Swiss-Prot
Match: MSRA_DICDI (Peptide methionine sulfoxide reductase OS=Dictyostelium discoideum GN=msrA PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.101e-24 Identity = 49/82 (59.76%), Postives = 62/82 (75.61%), Query Frame = 1 Query: 349 AQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTTLNRQ 594 A F AGCFW VEL FQRV GVTKT VGY+ G + NP+Y VCSG T E V ++YDP++ +++ LL +FW++HDPTTLNRQ Sbjct: 4 ATFAAGCFWSVELLFQRVAGVTKTRVGYTNGTVENPTYRQVCSGKTGCAEAVELEYDPEKVTYNQLLGLFWSKHDPTTLNRQ 85
BLAST of DY304564 vs. ExPASy Swiss-Prot
Match: MSRA_THEVU (Peptide methionine sulfoxide reductase msrA OS=Thermoactinomyces vulgaris GN=msrA PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.438e-24 Identity = 49/82 (59.76%), Postives = 63/82 (76.83%), Query Frame = 1 Query: 349 AQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTTLNRQ 594 A FGAGCFWGVE F++VPGV T VGY G NP+YE+VC+ T H EVV+V+YDP++ S++ LL++FW H+PTTLNRQ Sbjct: 2 ATFGAGCFWGVEETFRQVPGVIDTAVGYMGGTTENPTYEEVCTDKTGHAEVVQVEYDPEQVSYEELLNVFWDNHNPTTLNRQ 83
BLAST of DY304564 vs. ExPASy Swiss-Prot
Match: MSRA_METMJ (Peptide methionine sulfoxide reductase msrA OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=msrA PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.438e-24 Identity = 52/89 (58.43%), Postives = 62/89 (69.66%), Query Frame = 1 Query: 328 PAPGQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTTLNRQ 594 P + A FGAGCFWGVE AF+RVPGV +T VG+ G + NP+Y +VC+G T H EVV+V YDP S+ LLD FW HDPTT NRQ Sbjct: 3 PEKSLERATFGAGCFWGVEEAFRRVPGVVETAVGFMGGTVENPTYPEVCTGRTGHAEVVQVTYDPGTVSYRALLDTFWDAHDPTTPNRQ 91
BLAST of DY304564 vs. ExPASy Swiss-Prot
Match: MSRA_RHORT (Peptide methionine sulfoxide reductase msrA OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=msrA PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.217e-23 Identity = 46/82 (56.10%), Postives = 60/82 (73.17%), Query Frame = 1 Query: 349 AQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTTLNRQ 594 A F AGCFWGVE F+++PGVT T VGY+ G+ P+Y VC+G T H E VRV YDP + +++ LLD+FWA HDPT ++RQ Sbjct: 4 ATFAAGCFWGVEETFRKIPGVTGTTVGYTGGHFKEPTYRQVCAGDTGHAEAVRVDYDPDKVTYEQLLDVFWAAHDPTQVDRQ 85 The following BLAST results are available for this feature:
BLAST of DY304564 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 292
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Sequences
The
following sequences are available for this feature:
EST sequence >DY304564 ID=DY304564; Name=DY304564; organism=Citrus clementina; type=EST; length=858bpback to top |