DY304565
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY304565 vs. ExPASy Swiss-Prot
Match: MGRN1_RAT (Probable E3 ubiquitin-protein ligase MGRN1 OS=Rattus norvegicus GN=Mgrn1 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.556e-15 Identity = 64/212 (30.19%), Postives = 113/212 (53.30%), Query Frame = 1 Query: 274 HQKAVTIRNDVNVKKETLRV---EPDEENPGQ--------FLVAFTFDAAAPGSITVAFFGKEDV--DCTVIATKEELLKPVTITFQQGLGQKFRQPCGTGIDLSMFDEIALT-KVNAEIYPIIVRAEARPADSSEAEANPTGNSQITMAVFEKKEEGGFPVQVIKQILWVNRMRYELQEIYGIGN-----TVAGDE--TEFGKKSVFCLSE 846 H+ T+R+ VN++K++LR+ + D ++P + + + FTFDA A +IT+ E+ TV + K L+ T+ +++G+ Q+F P ID S + + L ++ ++P++++A D E TG++ + +A FEK +G F V+ +KQ V+R+ Y LQEIYGI N T D+ ++ + V CLS+ Sbjct: 79 HEPVKTLRSLVNIRKDSLRLVRYKDDTDSPTEDGEKPRVLYSLEFTFDADARVAITIYCQAVEEFVNGMTVYSCKNPSLQSETVHYKRGVSQQFSLP-SFKIDFSEWKDDELNFDLDRGVFPVVIQAVVDEGDVVEV----TGHAHVLLAAFEKHVDGSFSVKPLKQKQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSSECVVCLSD 285
BLAST of DY304565 vs. ExPASy Swiss-Prot
Match: MGRN1_MOUSE (Probable E3 ubiquitin-protein ligase MGRN1 OS=Mus musculus GN=Mgrn1 PE=1 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 3.466e-15 Identity = 63/212 (29.72%), Postives = 113/212 (53.30%), Query Frame = 1 Query: 274 HQKAVTIRNDVNVKKETLRV---EPDEENPGQ--------FLVAFTFDAAAPGSITVAFFGKEDV--DCTVIATKEELLKPVTITFQQGLGQKFRQPCGTGIDLSMFDEIALT-KVNAEIYPIIVRAEARPADSSEAEANPTGNSQITMAVFEKKEEGGFPVQVIKQILWVNRMRYELQEIYGIGN-----TVAGDE--TEFGKKSVFCLSE 846 H+ T+R+ VN++K++LR+ + D ++P + + + FTFDA A +IT+ E++ V + K L+ T+ +++G+ Q+F P ID S + + L ++ ++P++++A D E TG++ + +A FEK +G F V+ +KQ V+R+ Y LQEIYGI N T D+ ++ + V CLS+ Sbjct: 78 HEPVKTLRSLVNIRKDSLRLVRYKEDADSPTEDGEKPRVLYSLEFTFDADARVAITIYCQAVEELVNGVAVYSCKNPSLQSETVHYKRGVSQQFSLP-SFKIDFSEWKDDELNFDLDRGVFPVVIQAVVDEGDVVEV----TGHAHVLLAAFEKHVDGSFSVKPLKQKQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSSECVVCLSD 284
BLAST of DY304565 vs. ExPASy Swiss-Prot
Match: MGRN1_HUMAN (Probable E3 ubiquitin-protein ligase MGRN1 OS=Homo sapiens GN=MGRN1 PE=1 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 5.912e-15 Identity = 63/212 (29.72%), Postives = 112/212 (52.83%), Query Frame = 1 Query: 274 HQKAVTIRNDVNVKKETLRV---EPDEENPGQ--------FLVAFTFDAAAPGSITVAFFGKEDV--DCTVIATKEELLKPVTITFQQGLGQKFRQPCGTGIDLSMFDEIALT-KVNAEIYPIIVRAEARPADSSEAEANPTGNSQITMAVFEKKEEGGFPVQVIKQILWVNRMRYELQEIYGIGN-----TVAGDE--TEFGKKSVFCLSE 846 H+ T+R+ VN++K++LR+ + D ++P + + + FTFDA A +IT+ E+ V + K L+ T+ +++G+ Q+F P ID S + + L ++ ++P++++A D E TG++ + +A FEK +G F V+ +KQ V+R+ Y LQEIYGI N T D+ ++ + V CLS+ Sbjct: 78 HEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSLEFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLP-SFKIDFSEWKDDELNFDLDRGVFPVVIQAVVDEGDVVEV----TGHAHVLLAAFEKHMDGSFSVKPLKQKQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSD 284
BLAST of DY304565 vs. ExPASy Swiss-Prot
Match: RN157_XENLA (RING finger protein 157 OS=Xenopus laevis GN=rnf157 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.456e-13 Identity = 66/208 (31.73%), Postives = 105/208 (50.48%), Query Frame = 1 Query: 289 TIRNDVNVKKETLRVEPDEEN-----------PGQFLVAFTFDAAAPGSITVAFFGKEDVDCTVIA--TKEELLKPVTITFQQGLGQKFRQPCGTGIDLSMFDEIALT-KVNAEIYPIIVRAEARPADSSEAEANPTGNSQITMAVFEKKEEGGFPVQVIKQILWVNRMRYELQEIYGIGN-------TVAGDE-TEFGKKSVFCLSE 846 T+R+ +N++K+TLR+ E + V FTFD A +IT+ + E+ + + K L+ T+ F++G+ Q+F P T +D S + E LT ++ E+YP++V A + G+S + MA FEK +G F V+ +KQ V+ + Y LQEIYGI N VA DE ++ + V CLS+ Sbjct: 83 TLRSLINIRKDTLRLVRCTEELKTTGVEGSRPKVHYNVEFTFDTDARVAITMYYQATEEFQGGIPSYLPKSSNLQSDTVHFKRGVSQQFCFPSHT-VDPSEWREEELTFDLDREVYPMVVHAVVEEGEEH------LGHSHVLMATFEKHADGSFCVKPLKQKQVVDGVSYLLQEIYGIENKYNSQDSKVAEDELSDNSAECVVCLSD 283
BLAST of DY304565 vs. ExPASy Swiss-Prot
Match: RN157_HUMAN (RING finger protein 157 OS=Homo sapiens GN=RNF157 PE=2 SV=3) HSP 1 Score: 75.485 bits (184), Expect = 4.237e-13 Identity = 64/208 (30.77%), Postives = 108/208 (51.92%), Query Frame = 1 Query: 289 TIRNDVNVKKETLRV---EPDEENPGQ--------FLVAFTFDAAAPGSITVAFFGKEDVDCTVIA--TKEELLKPVTITFQQGLGQKFRQPCGTGIDLSMFDEIALT-KVNAEIYPIIVRAEARPADSSEAEANPTGNSQITMAVFEKKEEGGFPVQVIKQILWVNRMRYELQEIYGIGN-------TVAGDE-TEFGKKSVFCLSE 846 T+R+ VN++K+TLR+ + ++PG+ + V FTFD A +IT+ + E+ + + K+ L+ T+ +++G+ Q+F P T +D S + E L ++ E+YP++V A D G+ + + FEK +G F V+ +KQ V+ + Y LQEIYGI N VA DE ++ + V CLS+ Sbjct: 83 TLRSLVNIRKDTLRLVKCAEEVKSPGEEASKAKVHYNVEFTFDTDARVAITIYYQATEEFQNGIASYIPKDNSLQSETVQYKRGVCQQFCLPSHT-VDPSEWAEEELGFDLDREVYPLVVHAVVDEGDEY------FGHCHVLLGTFEKHTDGTFCVKPLKQKQVVDGVSYLLQEIYGIENKYNTQDSKVAEDEVSDNSAECVVCLSD 283
BLAST of DY304565 vs. ExPASy Swiss-Prot
Match: RN157_MOUSE (RING finger protein 157 OS=Mus musculus GN=Rnf157 PE=2 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 4.684e-12 Identity = 61/208 (29.33%), Postives = 103/208 (49.52%), Query Frame = 1 Query: 289 TIRNDVNVKKETLR-------VEPDEENPGQ----FLVAFTFDAAAPGSITVAFFGKEDVDCTVIA--TKEELLKPVTITFQQGLGQKFRQPCGTGIDLSMFDEIALT-KVNAEIYPIIVRAEARPADSSEAEANPTGNSQITMAVFEKKEEGGFPVQVIKQILWVNRMRYELQEIYGIGN--------TVAGDETEFGKKSVFCLSE 846 T+R+ +N++K+TLR V+ E G+ + V FTFD A +IT+ + E+ + + K+ L+ T+ +++G+ Q+F P T +D S + E L ++ E+YP++V A D G+ + + FEK +G F V+ +KQ V+ + Y LQEIYGI N D ++ + V CLS+ Sbjct: 83 TLRSLINIRKDTLRLVKCAEEVKSHGEEAGKAKVHYNVEFTFDTDARVAITIYYQATEEFQNGIASYIPKDNSLQSETVHYKRGVFQQFCLPSHT-VDPSEWAEEELGFDLDREVYPLVVHAVVDEGDEY------FGHCHVLLGTFEKHPDGTFCVKPLKQKQVVDGVSYLLQEIYGIENKYNTQDSKVAEDDVSDNSAECVVCLSD 283
BLAST of DY304565 vs. ExPASy Swiss-Prot
Match: MGRN1_DANRE (Probable E3 ubiquitin-protein ligase MGRN1 OS=Danio rerio GN=mgrn1 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.780e-11 Identity = 56/212 (26.42%), Postives = 105/212 (49.53%), Query Frame = 1 Query: 274 HQKAVTIRNDVNVKKETLRV-------EPDEENPGQ----FLVAFTFDAAAPGSITVAFFGKEDV--DCTVIATKEELLKPVTITFQQGLGQKFRQPCGTGIDLSMFDEIALT-KVNAEIYPIIVRAEARPADSSEAEANPTGNSQITMAVFEKKEEGGFPVQVIKQILWVNRMRYELQEIYGIGN-------TVAGDETEFGKKSVFCLSE 846 H+ T+R+ VN++K++LR+ + E+ G + V F FD A +IT+ E+ + + K + T+ +++G+ Q+F P ID + + L ++ ++P++V+A D + TG++ + +A FE+ +G F V+ +KQ V+R+ Y LQEIYGI N + + ++ + V CLS+ Sbjct: 78 HEPVKTLRSLVNIRKDSLRLVRYKDDSDSTPEDTGDPRVLYSVEFCFDTDARVAITLYCQAFEEFANGMAIYSAKSPSMVSETVHYKRGINQQFSLP-SFKIDFTKWKPEELNFDLDKGVFPLVVQAIVDDGD------DVTGHAHVLLAAFERHVDGSFSVKPLKQKQIVDRVSYLLQEIYGIENRNNQETKSTEDENSDNSSECVVCLSD 282 The following BLAST results are available for this feature:
BLAST of DY304565 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY304565 ID=DY304565; Name=DY304565; organism=Citrus clementina; type=EST; length=846bpback to top |