DY304569

Overview
NameDY304569
Unique NameDY304569
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length879
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY304569 vs. ExPASy Swiss-Prot
Match: 12KD_FRAAN (Auxin-repressed 12.5 kDa protein OS=Fragaria ananassa PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.224e-20
Identity = 54/109 (49.54%), Postives = 67/109 (61.47%), Query Frame = 3 
Query:  150 MLEKLWDDVVAGPQPDRGLGRLRKITTTPLAVKEGGEAESSSGKFQRSLSMXXXXXXXXXXXXXXXXXXXRKDNVWRSVFHPGSNLATRGIGAEVFDKPTHPNSPTVYD 476
            +L+KLWDD+VAGPQP+RGLG LRK+   PL +K+ GE+           S                    RKDNVWRSVFHPGSNL+++ +G +VFD P  PNSPTVYD
Sbjct:    3 LLDKLWDDIVAGPQPERGLGMLRKVPQ-PLNLKDEGES-----------SKITMPTTPTTPVTPTTPISARKDNVWRSVFHPGSNLSSKTMGNQVFDSP-QPNSPTVYD 98
The following BLAST results are available for this feature:
BLAST of DY304569 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
12KD_FRAAN2.224e-2049.54Auxin-repressed 12.5 kDa protein OS=Fragaria anana... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAQ9YB04RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304569 ID=DY304569; Name=DY304569; organism=Citrus clementina; type=EST; length=879bp
AAGTAGAAAAAATCGCATCTGGAAGATTCCATTATAGATATTATCCATTA
CCAACTTGTCTATATAAACAAACAATAGAGGAAGTAGCCGATCTCACTGA
AGAAGAGGTTAAAGATTTAGAAACTAGCAGCTAAATTGTAAATTTAAAGA
TGCTAGAGAAGCTTTGGGACGATGTTGTGGCAGGGCCTCAGCCTGATCGT
GGCCTTGGCAGGCTGAGGAAAATCACCACAACACCCTTAGCAGTCAAAGA
GGGTGGTGAGGCGGAGTCGTCGTCGGGCAAGTTCCAGAGGTCTCTGTCAA
TGCCAGCGAGTCCAGGGGCACCGTCGACGCCAGTGACGCCGACGACGCCG
CTGTCGGCGCGTAAGGACAACGTGTGGAGGAGCGTGTTTCACCCCGGTAG
CAACCTTGCTACTAGGGGTATCGGTGCAGAGGTCTTTGACAAGCCCACAC
ATCCTAACTCTCCCACTGTTTATGACTGCAACCAAATAAAGGCTAAGAGG
AAGGAGGAAAACGTGGCACTCTGTCTCATGGGCGCGTTGACATAGATCTT
TGTCTTATTCAGTCATGATCACTCAATTCACACTCTTTTGTGAGTCCCTG
CCAGTTCTTCCTTAGTTAAAGCCAAATGATGTAATATATAATATATTTTG
TATTATGTAGTGATCATGGATAAGATTAGATCGTACTATAGCTAGGGCTG
TTGGATCTGTTTATTTTGCGGTGGATGATTAAAGTAGTAATTTAACTATA
TTGATTATCCTTAATTATCATTATTATTATTATTGGTAATTATTATTATC
AATATTAGATGGATCCTGATCCCGTGATCGGGGCGTCGTGTTTTTGGGAT
CGGGGAATTGATGTTGCCCCTGAGATGGT
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