DY304571

Overview
NameDY304571
Unique NameDY304571
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length905
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY304571 vs. ExPASy Swiss-Prot
Match: AFMID_MOUSE (Probable arylformamidase OS=Mus musculus GN=Afmid PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.845e-11
Identity = 38/114 (33.33%), Postives = 59/114 (51.75%), Query Frame = 2 
Query:  536 VVYGDQPRNRLDLHFPTNNDGPKPVVVFVTGGAWIIGYKAWGSLLGRQLAERDIIVACLDYRNFPQGTISDMVKDVSQGISFVFNNIADYGGDPNRIYLMGESAGAHISSCALL 877
            V YGD    +LD++FP  +    P+ +F+ GG W  G K   + +   L  + I+V  + Y   P+GT+  MV  V++ + F+        G    IYL G SAGAH+++  LL
Sbjct:   64 VPYGDGEGEKLDIYFPDEDSKAFPLFLFLHGGYWQSGSKDDSAFMVNPLTAQGIVVVIVAYDIAPKGTLDQMVDQVTRSVVFLQRRYPSNEG----IYLCGHSAGAHLAAMVLL 173
The following BLAST results are available for this feature:
BLAST of DY304571 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
AFMID_MOUSE9.845e-1133.33Probable arylformamidase OS=Mus musculus GN=Afmid ... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAQ9YB06RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304571 ID=DY304571; Name=DY304571; organism=Citrus clementina; type=EST; length=905bp
ACAACAACATTGTATTTGCCTGCACATGAAGTACGTTGTTTCATTATCAT
TGCACTCATTTCAAAGTATATCATTAACGACCCACAATCCAAGATCCAAT
CTCCGACCATATTATTAATATAAAACATCTTTTATTTTGCTTTCTGGGTT
TTGTTTTTGGGTGTGTTTCGTTAAGGTGGTAGTGGAAAAATAGACAATTA
AAATTATGAATGACGATATGGAGACCGAACCGATGGTGTCGTTTGGTCCC
TCTAGTAATTATGTGGGAAGCAACAATCAGCAGAGGCGCCGGAGACCCGC
CGGAAGCAAGCCGGAGAAGCCACGACGGCAGAATTCGTTTAGCCGAGATA
TTGGGCACGCTGCCGCTGAGACTTATCTTATCACCAGGCTAACCTTCACT
CTTCTTCGATATCTTGGGTTAGGCTATCGGTGGATCTCAAGATTGGTTGC
TCTCGGTTGTTATGCTATGTTACTTCTGCCCGGCTTTCTCCAAGTTGCCT
ATTATTATTTTTTCTCGAGCCAAGTCAGGCGGAGTGTTGTTTATGGAGAT
CAACCCAGAAATAGGTTGGACCTACATTTTCCCACAAATAATGATGGACC
GAAGCCAGTTGTGGTGTTTGTAACTGGTGGAGCCTGGATTATTGGGTACA
AAGCGTGGGGTTCTCTTCTAGGAAGGCAATTGGCGGAAAGAGACATTATA
GTTGCATGCCTTGATTATAGAAATTTTCCCCAGGGAACTATCAGTGACAT
GGTGAAAGACGTTTCTCAGGGCATCTCGTTTGTCTTCAACAACATTGCTG
ATTATGGAGGTGATCCTAACAGGATTTATCTAATGGGGGAATCCGCTGGT
GCACATATTTCTTCTTGTGCTCTCCTTGGAGCAAGCAGTCAAAGAATCTA
CCGGA
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