DY304572

Overview
NameDY304572
Unique NameDY304572
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length896
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY304572 vs. ExPASy Swiss-Prot
Match: SUVR5_ARATH (Histone-lysine N-methyltransferase SUVR5 OS=Arabidopsis thaliana GN=SUVR5 PE=1 SV=2)

HSP 1 Score: 229.565 bits (584), Expect = 1.925e-59
Identity = 129/283 (45.58%), Postives = 160/283 (56.54%), Query Frame = 2
Query:    2 FLCSNGCKIFKDXXXXXXXXXXXSVSAGIRSSDSSDFVNNQWEVDECHCIIDSRHLGRKPLLRGTVLCDDISSGLESVPVACVVDDGLLETLCISADSSDSQKTRCSMPWESFTYVTKPLLDQSLDLDAESLQLGCACANSTCFPETCDHVYLFDNDYEDAKDIDGKSVHGRFPYDQTGRVILEEGYLIYECNHMCSCDRTCPNRVLQNGVRVKLEVFKTENKVMXXXXXXXXXXXCGLTRVLIYKGGPLGQVKQFCEAHLYG----DI*GEVLNELETNKKR 838
            ++CSNGCK  KD                  + D+    N + EVDECHCI+++ H  ++P     VLC DIS G ESVP+ CVVDD L           +S+K    MPWE FTYVT  +L  S+DL  E+LQL C+C +S C P TCDHVYLF ND+EDA+DI GKS+  RFPYD   R+ILEEGY +YECN  C C RTC NRVLQNG+R KLEVF+TE+K                           G   + CE  L G    +  GEVL++ E NK+R
Sbjct:  756 YICSNGCKPVKDPNLLHPLIPRQENDRFGIAVDAGQHSNIELEVDECHCIMEAHHFSKRPFGNTAVLCKDISFGKESVPI-CVVDDDLW----------NSEKPY-EMPWECFTYVTNSILHPSMDLVKENLQLRCSCRSSVCSPVTCDHVYLFGNDFEDARDIYGKSMRCRFPYDGKQRIILEEGYPVYECNKFCGCSRTCQNRVLQNGIRAKLEVFRTESK---------------------------GWGLRACEHILRGTFVCEYIGEVLDQQEANKRR 999          
BLAST of DY304572 vs. ExPASy Swiss-Prot
Match: EHMT2_MOUSE (Histone-lysine N-methyltransferase, H3 lysine-9 specific 3 OS=Mus musculus GN=Ehmt2 PE=1 SV=2)

HSP 1 Score: 63.5438 bits (153), Expect = 4.115e-12
Identity = 45/170 (26.47%), Postives = 82/170 (48.24%), Query Frame = 2
Query:  167 LGRKPLLRGTVLCDDISSGLESVPVACVVDDGLLETLCISADSSDSQKTRCSMPWESFTYVTKPLLDQSLDLDAESLQLG-CACANSTCFPETCDHVYLFDNDYEDAKDIDGKSVHGRFPYDQTGRVILE----EGYLIYECNHMCSCDRTCPNRVLQNGVRVKLEVFKT 661
            +G + +    ++C D++ G E+VP+ CV  +G+    C                 E + Y+++     ++++D     L  C C +  C    C               + G+ +  R  YD+ GR++ E    E  LI+ECN  CSC R+C NRV+Q+G++V+L++++T
Sbjct:  964 VGNRAVRTEKIICRDVARGYENVPIPCV--NGVDGEPCP----------------EDYKYISENCETSTMNIDRNITHLQHCTCVDD-CSSSNC---------------LCGQ-LSIRCWYDKDGRLLQEFNKIEPPLIFECNQACSCWRSCKNRVVQSGIKVRLQLYRT 1098          

HSP 2 Score: 28.8758 bits (63), Expect = 4.115e-12
Identity = 12/21 (57.14%), Postives = 15/21 (71.43%), Query Frame = 1
Query:  739 GWAVRAGQAILRGTFVW*YIG 801
            GW VRA Q I +GTF+  Y+G
Sbjct: 1102 GWGVRALQTIPQGTFICEYVG 1122          
BLAST of DY304572 vs. ExPASy Swiss-Prot
Match: EHMT2_HUMAN (Histone-lysine N-methyltransferase, H3 lysine-9 specific 3 OS=Homo sapiens GN=EHMT2 PE=1 SV=3)

HSP 1 Score: 63.5438 bits (153), Expect = 4.120e-12
Identity = 45/170 (26.47%), Postives = 81/170 (47.65%), Query Frame = 2
Query:  167 LGRKPLLRGTVLCDDISSGLESVPVACVVDDGLLETLCISADSSDSQKTRCSMPWESFTYVTKPLLDQSLDLDAESLQLG-CACANSTCFPETCDHVYLFDNDYEDAKDIDGKSVHGRFPYDQTGRVILE----EGYLIYECNHMCSCDRTCPNRVLQNGVRVKLEVFKT 661
            +G + +    ++C D++ G E+VP+ CV  +G+    C                 E + Y+++     ++++D     L  C C +  C    C               + G+ +  R  YD+ GR++ E    E  LI+ECN  CSC R C NRV+Q+G++V+L++++T
Sbjct:  911 VGNRAIRTEKIICRDVARGYENVPIPCV--NGVDGEPCP----------------EDYKYISENCETSTMNIDRNITHLQHCTCVDD-CSSSNC---------------LCGQ-LSIRCWYDKDGRLLQEFNKIEPPLIFECNQACSCWRNCKNRVVQSGIKVRLQLYRT 1045          

HSP 2 Score: 28.8758 bits (63), Expect = 4.120e-12
Identity = 12/21 (57.14%), Postives = 15/21 (71.43%), Query Frame = 1
Query:  739 GWAVRAGQAILRGTFVW*YIG 801
            GW VRA Q I +GTF+  Y+G
Sbjct: 1049 GWGVRALQTIPQGTFICEYVG 1069          
BLAST of DY304572 vs. ExPASy Swiss-Prot
Match: SUVH1_ARATH (Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1 OS=Arabidopsis thaliana GN=SUVH1 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 9.154e-12
Identity = 54/164 (32.93%), Postives = 76/164 (46.34%), Query Frame = 2
Query:  179 PLLRGTVLCDDISSGLESVPVACVVDDGLLETLCISADSSDSQKTRCSMPWESFTYVTKPLLDQSLDLDAESLQLGCACANSTCFPETCDHVYLFDNDYEDAKDIDGKSVHGRFPYDQTGRVILEEGYLIYECNHMCSCDRTCPNRVLQNGVRVKLEVFKTENK 670
            P  +G +L  D++SG+ES+PV+ V +        +  D+  +           FTY T     +S  L   S   GC CAN  C P   D   +  N              G FPY   G +++    +IYEC+  C C  TC N+V Q GV+V+LEVFKT N+
Sbjct:  379 PSRQGLIL-PDMTSGVESIPVSLVNE--------VDTDNGPAY----------FTYSTTVKYSESFKLMQPSF--GCDCAN-LCKPGNLDCHCIRKNG-------------GDFPYTGNG-ILVSRKPMIYECSPSCPCS-TCKNKVTQMGVKVRLEVFKTANR 505          

HSP 2 Score: 25.0238 bits (53), Expect = 9.154e-12
Identity = 9/21 (42.86%), Postives = 14/21 (66.67%), Query Frame = 1
Query:  739 GWAVRAGQAILRGTFVW*YIG 801
            GW +R+  AI  G+F+  Y+G
Sbjct:  506 GWGLRSWDAIRAGSFICIYVG 526          
BLAST of DY304572 vs. ExPASy Swiss-Prot
Match: EHMT1_HUMAN (Histone-lysine N-methyltransferase, H3 lysine-9 specific 5 OS=Homo sapiens GN=EHMT1 PE=1 SV=3)

HSP 1 Score: 64.6994 bits (156), Expect = 1.169e-11
Identity = 48/161 (29.81%), Postives = 78/161 (48.45%), Query Frame = 2
Query:  197 VLCDDISSGLESVPVACVVDDGLLETLCISADSSDSQKTRCSMPWESFTYVTKPLLDQSLDLDAESLQLGCACANSTCFPETCDHVYLFDNDYEDAKDIDGKSVHGRFPYDQTGRVILE----EGYLIYECNHMCSCDRTCPNRVLQNGVRVKLEVFKTEN 667
            ++  DI+ G E +P+ CV             ++ DS+    +  + S   VT P+   ++D +   LQ  C C +  C    C               + G+ +  R  YD+ GR++ E    E  LI+ECNH CSC R C NRV+QNG+R +L++++T +
Sbjct:  978 IVSRDIARGYERIPIPCV-------------NAVDSEPCPSNYKYVSQNCVTSPM---NIDRNITHLQY-CVCIDD-CSSSNC---------------MCGQ-LSMRCWYDKDGRLLPEFNMAEPPLIFECNHACSCWRNCRNRVVQNGLRARLQLYRTRD 1104          

HSP 2 Score: 26.1794 bits (56), Expect = 1.169e-11
Identity = 12/21 (57.14%), Postives = 14/21 (66.67%), Query Frame = 1
Query:  739 GWAVRAGQAILRGTFVW*YIG 801
            GW VR+ Q I  GTFV  Y+G
Sbjct: 1106 GWGVRSLQDIPPGTFVCEYVG 1126          
BLAST of DY304572 vs. ExPASy Swiss-Prot
Match: CLR4_SCHPO (Histone-lysine N-methyltransferase, H3 lysine-9 specific OS=Schizosaccharomyces pombe GN=clr4 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 1.199e-11
Identity = 40/115 (34.78%), Postives = 57/115 (49.57%), Query Frame = 2
Query:  326 PWESFTYVTKPLLDQSLDLDAESLQLGCACANSTCFPETCDHVYLFDNDYEDAKDIDGKSVHGRFPYDQTGRVILEEGYLIYECNHMCSCDRTCPNRVLQNGVRVKLEVFKTENK 670
            P   F ++++  L Q +     + Q GC C++       CD      N+    + +D       F YD  GRV  + G +IYECN  CSC   CPNRV+Q G  + LE+FKT+ K
Sbjct:  233 PSLDFQFISQYRLTQGVIPPDPNFQSGCNCSSLG----GCDL-----NNPSRCECLDDLDEPTHFAYDAQGRVRADTGAVIYECNSFCSCSMECPNRVVQRGRTLPLEIFKTKEK 338          

HSP 2 Score: 22.3274 bits (46), Expect = 1.199e-11
Identity = 9/21 (42.86%), Postives = 13/21 (61.90%), Query Frame = 1
Query:  739 GWAVRAGQAILRGTFVW*YIG 801
            GW VR+ +    GTF+  Y+G
Sbjct:  339 GWGVRSLRFAPAGTFITCYLG 359          
BLAST of DY304572 vs. ExPASy Swiss-Prot
Match: SUV39_DROPS (Histone-lysine N-methyltransferase Su(var)3-9 OS=Drosophila pseudoobscura pseudoobscura GN=Su(var)3-9 PE=3 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 7.387e-11
Identity = 38/111 (34.23%), Postives = 54/111 (48.65%), Query Frame = 2
Query:  338 FTYVTKPLLDQSLDLDAESLQLGCACANSTCFPETCDHVYLFDNDYEDAKDIDGKSVHGRFPYDQT-GRVILEEGYLIYECNHMCSCDRTCPNRVLQNGVRVKLEVFKTEN 667
            F Y+ K ++ + +      L +GC C + +    T   +              G+     F YD+T GR+ L  G  IYECN  CSCD +C NRV+QNG +  L +FKT N
Sbjct:  387 FKYIQKNIIGEGVPKPQAGL-VGCMCRHQSGEQCTASSMCC------------GRMAGEIFAYDRTTGRLRLRPGSAIYECNSRCSCDESCTNRVVQNGRKHPLVLFKTSN 484          

HSP 2 Score: 26.5646 bits (57), Expect = 7.387e-11
Identity = 11/21 (52.38%), Postives = 13/21 (61.90%), Query Frame = 1
Query:  739 GWAVRAGQAILRGTFVW*YIG 801
            GW VR  Q + +G FV  YIG
Sbjct:  487 GWGVRTPQPLKKGVFVCEYIG 507          
The following BLAST results are available for this feature:
BLAST of DY304572 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
SUVR5_ARATH1.925e-5945.58Histone-lysine N-methyltransferase SUVR5 OS=Arabid... [more]
EHMT2_MOUSE4.115e-1226.47Histone-lysine N-methyltransferase, H3 lysine-9 sp... [more]
EHMT2_HUMAN4.120e-1226.47Histone-lysine N-methyltransferase, H3 lysine-9 sp... [more]
SUVH1_ARATH9.154e-1232.93Histone-lysine N-methyltransferase, H3 lysine-9 sp... [more]
EHMT1_HUMAN1.169e-1129.81Histone-lysine N-methyltransferase, H3 lysine-9 sp... [more]
CLR4_SCHPO1.199e-1134.78Histone-lysine N-methyltransferase, H3 lysine-9 sp... [more]
SUV39_DROPS7.387e-1134.23Histone-lysine N-methyltransferase Su(var)3-9 OS=D... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAQ9YB08RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304572 ID=DY304572; Name=DY304572; organism=Citrus clementina; type=EST; length=896bp
ATTTCTATGTTCTAATGGATGTAAGATTTTCAAGGACCCACATTTGCCTC
CACATTTGGAACCTCTACCCAGTGTTTCTGCAGGAATACGATCTTCAGAT
TCATCAGATTTTGTGAATAATCAGTGGGAAGTGGATGAGTGTCATTGTAT
TATTGATTCACGTCATTTAGGGCGAAAACCCTTGCTAAGGGGCACTGTCT
TGTGTGATGATATAAGCTCGGGATTGGAATCGGTTCCAGTAGCTTGTGTA
GTGGATGATGGTCTTCTAGAAACCCTATGCATCTCTGCTGATAGTTCAGA
CAGCCAAAAGACCAGATGCTCCATGCCTTGGGAGAGTTTTACGTATGTTA
CAAAGCCATTACTTGATCAATCCCTTGATCTTGATGCCGAGAGTTTGCAA
TTGGGATGTGCCTGTGCAAATTCAACTTGCTTTCCTGAAACATGTGATCA
CGTATACCTCTTTGACAATGATTACGAAGATGCAAAAGACATTGATGGGA
AATCCGTGCATGGTAGATTCCCATACGACCAGACAGGAAGGGTTATTCTT
GAGGAGGGTTATCTTATTTATGAGTGCAATCACATGTGTAGCTGCGATAG
AACCTGTCCAAATAGAGTTTTGCAGAATGGAGTACGAGTGAAATTAGAAG
TCTTTAAAACAGAGAATAAGGTAATGATTTCAATTTTCATTATTTTCGAG
AGCTTTATCTGTGGCCTCACACGTGTGTTAATTTATAAGGGTGGGCCGTT
AGGGCAGGTCAAGCAATTCTGCGAGGCACATTTGTATGGTGATATATAGG
GGGAAGTTTTAAATGAGCTGGAAACAAATAAGAAGCGTATCAGGTTACTT
TTTGAATTATAGCGTTCCCTTTCTACCCTTTGTAAGCCTTAATGTT
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