DY304573

Overview
NameDY304573
Unique NameDY304573
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length953
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY304573 vs. ExPASy Swiss-Prot
Match: GUN10_ARATH (Endoglucanase 10 OS=Arabidopsis thaliana GN=At1g75680 PE=2 SV=2)

HSP 1 Score: 248.825 bits (634), Expect = 3.354e-65
Identity = 130/235 (55.32%), Postives = 156/235 (66.38%), Query Frame = 2
Query:  245 MGEKSKSKGCFGWFXXXXXXXXXXGAIVYTIK---KKTSHSDKXXXXXXXXXXXEKKYAEALKVAMQFFDVQKSGKLVNNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPQENVLIVQVGNPDKDHKCWERPESMAEERHSFRSTNPFLEKRWQLKRHPPWLSGP*LLKKSAPTYSSPLPYLGHA 940
            M EKSKS+G  GWF           A+VYT+K   KK+   D            +KKYA+ALK+A+QFFD+QKSGKL NNKI WRGDS LKDG +  LDL+KG+YDAGDH+KFGFPMAFTATVLSW+ILEYGDQM+ V+QL PA+DSL+WITDYLI AHP +NVL +QVG+P  DH CWERPE M E+R   +            +      S   + K S PTYS+ L  L HA
Sbjct:    1 MEEKSKSRGWCGWFIAIIVLASVILAVVYTVKLRTKKSGDDDGGGPVPGPPGAIDKKYADALKLALQFFDIQKSGKLENNKIPWRGDSGLKDGSEDNLDLSKGLYDAGDHIKFGFPMAFTATVLSWSILEYGDQMNAVNQLDPAKDSLRWITDYLIKAHPSDNVLYIQVGDPKVDHPCWERPEDMKEKRPLTKIDVDTPGTEVAAETAAAMASASLVFKDSDPTYSATL--LKHA 233          
BLAST of DY304573 vs. ExPASy Swiss-Prot
Match: GUN24_ORYSJ (Endoglucanase 24 OS=Oryza sativa subsp. japonica GN=Os09g0533900 PE=2 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.309e-60
Identity = 107/187 (57.22%), Postives = 129/187 (68.98%), Query Frame = 2
Query:  257 SKSKGCFGWFXXXXXXXXXXGAIVYTIKKK-----TSHSDKXXXXXXXXXXXEKKYAEALKVAMQFFDVQKSGKLVNNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPQENVLIVQVGNPDKDHKCWERPESMAEER 802
            SK+KGC GW            A V  I KK     +    K           + KY +AL VA+QFF VQK+GKL NN+I WRGDSAL DG+  GLDL+KGMYDAGDH+KF FPMAFTATVLSW+ILEYGDQM    QL PA D+L+WITD+L++AHP +NV  +QVG+PD DH CWERPE+M+E+R
Sbjct:    3 SKTKGCCGWLIVALVASLVATAAVVAIMKKKVGGGSGRKLKPLPVPGPPGAIDSKYGDALGVALQFFQVQKAGKLENNQIPWRGDSALDDGKPAGLDLSKGMYDAGDHIKFSFPMAFTATVLSWSILEYGDQMSATKQLDPALDALRWITDFLVNAHPSDNVFYIQVGDPDLDHNCWERPETMSEKR 189          

HSP 2 Score: 32.7278 bits (73), Expect = 1.309e-60
Identity = 16/31 (51.61%), Postives = 19/31 (61.29%), Query Frame = 1
Query:  805 LIQVNKSFPGKKVAAETAPAMAFGSLVVKKK 897
            L Q+N   PG  VAAE A AMA  S+V K +
Sbjct:  191 LTQINTKSPGSDVAAEAAAAMASASIVFKSR 221          
BLAST of DY304573 vs. ExPASy Swiss-Prot
Match: GUN2_ARATH (Endoglucanase 2 OS=Arabidopsis thaliana GN=At1g19940 PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 2.903e-60
Identity = 102/161 (63.35%), Postives = 127/161 (78.88%), Query Frame = 2
Query:  320 AIVYTIKKKTSHSDKXXXXXXXXXXXEKKYAEALKVAMQFFDVQKSGKLVNNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPQENVLIVQVGNPDKDHKCWERPESMAEER 802
            A+++TI+ +++HSD             K YA ALK+AMQFFD+QKSGKL NN+ISWRGDS LKDG +  +DL+KG+YDAGDHMKFGFPMAFTATVLSW+ILEYGDQM  ++ L  A+DSLKW TD+LI+AHP  NVL +QVG+P  DHKCW+RPE+M  +R
Sbjct:   27 AVIFTIRHRSNHSDDDGSNV-------KNYANALKIAMQFFDIQKSGKLENNEISWRGDSGLKDGSEASIDLSKGLYDAGDHMKFGFPMAFTATVLSWSILEYGDQMASLNLLDHAKDSLKWTTDFLINAHPSPNVLYIQVGDPVTDHKCWDRPETMTRKR 180          

HSP 2 Score: 33.8834 bits (76), Expect = 2.903e-60
Identity = 17/31 (54.84%), Postives = 22/31 (70.97%), Query Frame = 1
Query:  802 TLIQVNKSFPGKKVAAETAPAMAFGSLVVKK 894
            TL +++   PG +VAAETA AMA  SLV K+
Sbjct:  181 TLTKIDTKTPGTEVAAETAAAMAAASLVFKE 211          
BLAST of DY304573 vs. ExPASy Swiss-Prot
Match: GUN18_ORYSJ (Endoglucanase 18 OS=Oryza sativa subsp. japonica GN=Os06g0715300 PE=2 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 4.073e-56
Identity = 94/135 (69.63%), Postives = 112/135 (82.96%), Query Frame = 2
Query:  398 EKKYAEALKVAMQFFDVQKSGKLVNNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPQENVLIVQVGNPDKDHKCWERPESMAEER 802
            + KYA+AL VA+QFF VQKSGKLVNN I WRGDSAL DG++ G+DL+KGMYDAGDHMKFGFPMAFTAT+LSW++LEYGD M   DQ   A D+L WI DYL++AHP ++VL +QVG+P  DHKCWERPE M E+R
Sbjct:   47 DHKYADALAVALQFFQVQKSGKLVNNTIHWRGDSALDDGKEAGIDLSKGMYDAGDHMKFGFPMAFTATMLSWSVLEYGDAMRAADQRDSAIDALNWIMDYLVNAHPSDDVLYIQVGDPKADHKCWERPEKMKEKR 181          

HSP 2 Score: 30.8018 bits (68), Expect = 4.073e-56
Identity = 16/29 (55.17%), Postives = 18/29 (62.07%), Query Frame = 1
Query:  805 LIQVNKSFPGKKVAAETAPAMAFGSLVVK 891
            L ++    PG  VAAETA AMA  SLV K
Sbjct:  183 LTKITPKSPGSDVAAETAAAMAAASLVYK 211          
BLAST of DY304573 vs. ExPASy Swiss-Prot
Match: GUN4_THEFU (Endoglucanase E-4 OS=Thermomonospora fusca GN=celD PE=1 SV=2)

HSP 1 Score: 161.384 bits (407), Expect = 2.167e-41
Identity = 78/137 (56.93%), Postives = 98/137 (71.53%), Query Frame = 2
Query:  407 YAEALKVAMQFFDVQKSGKLV-NNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPQENVLIVQVGNPDKDHKCWERPESMAEERHSFR 814
            YAEAL+ +M F++ Q+SGKL  NN++SWRGDS L DG D+GLDLT G YDAGDH+KFGFPMAFTAT+L+W  +E  +      Q+   +D+L+W+ DY I AHP  NVL VQVG+ D DHK W   E M  ER SF+
Sbjct:   52 YAEALQKSMFFYEAQRSGKLPENNRVSWRGDSGLNDGADVGLDLTGGWYDAGDHVKFGFPMAFTATMLAWGAIESPEGYIRSGQMPYLKDNLRWVNDYFIKAHPSPNVLYVQVGDGDADHKWWGPAEVMPMERPSFK 188          

HSP 2 Score: 29.6462 bits (65), Expect = 2.167e-41
Identity = 15/25 (60.00%), Postives = 18/25 (72.00%), Query Frame = 1
Query:  811 QVNKSFPGKKVAAETAPAMAFGSLV 885
            +V+ S PG  VAAETA AMA  S+V
Sbjct:  188 KVDPSCPGSDVAAETAAAMAASSIV 212          
BLAST of DY304573 vs. ExPASy Swiss-Prot
Match: GUN5_ORYSJ (Endoglucanase 5 OS=Oryza sativa subsp. japonica GN=Os02g0151300 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.389e-40
Identity = 70/137 (51.09%), Postives = 95/137 (69.34%), Query Frame = 2
Query:  407 YAEALKVAMQFFDVQKSGKL-VNNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPQENVLIVQVGNPDKDHKCWERPESMAEERHSFR 814
            Y EAL  ++ +F+ Q+SG+L  N ++ WRG S L DG + G+DL  G YDAGDH+KFG PMAFT T+LSW++LEYG+++    +L  A  ++KW TDY I AH   NVL  QVG+ D DH CW+RPE M   RH+++
Sbjct:   30 YGEALSKSLLYFEAQRSGRLPYNQRVRWRGHSGLTDGLEQGVDLVGGYYDAGDHVKFGLPMAFTVTMLSWSVLEYGEEIAAAGELGHALHAIKWGTDYFIKAHTHPNVLWTQVGDGDSDHYCWQRPEDMTTSRHAYK 166          

HSP 2 Score: 29.6462 bits (65), Expect = 1.389e-40
Identity = 14/28 (50.00%), Postives = 20/28 (71.43%), Query Frame = 1
Query:  811 QVNKSFPGKKVAAETAPAMAFGSLVVKK 894
            +V+   PG +VAAETA AMA  S+V ++
Sbjct:  166 KVDAENPGSEVAAETAAAMAAASIVFRR 193          
BLAST of DY304573 vs. ExPASy Swiss-Prot
Match: GUN12_ARATH (Endoglucanase 12 OS=Arabidopsis thaliana GN=At2g44540 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.360e-40
Identity = 77/137 (56.20%), Postives = 99/137 (72.26%), Query Frame = 2
Query:  407 YAEALKVAMQFFDVQKSGKLV-NNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPQENVLIVQVGNPDKDHKCWERPESMAEERHSFR 814
            YAEAL+ ++ +F+ Q+SGKL  N K++WRGDSALKDG D  +DLT G YDAGD+MKFGFP+AFT T+L+W+ +E G ++    +   +  +LKW TDYLI AHPQ NVL  QVG  + DHKCW RPE M   R S+R
Sbjct:   34 YAEALQKSLLYFEAQRSGKLPPNQKVTWRGDSALKDGSDAHIDLTGGYYDAGDNMKFGFPLAFTTTMLAWSNIEMGSELRAHHEQGNSLRALKWATDYLIKAHPQPNVLYGQVGEGNSDHKCWMRPEDMTTPRTSYR 170          

HSP 2 Score: 24.6386 bits (52), Expect = 2.360e-40
Identity = 11/27 (40.74%), Postives = 16/27 (59.26%), Query Frame = 1
Query:  802 TLIQVNKSFPGKKVAAETAPAMAFGSL 882
            T  +++   PG  +A ETA AMA  S+
Sbjct:  167 TSYRIDAQHPGSDLAGETAAAMAAASI 193          
BLAST of DY304573 vs. ExPASy Swiss-Prot
Match: GUN13_ARATH (Endoglucanase 13 OS=Arabidopsis thaliana GN=At2g44550 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 5.220e-40
Identity = 77/137 (56.20%), Postives = 98/137 (71.53%), Query Frame = 2
Query:  407 YAEALKVAMQFFDVQKSGKLV-NNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPQENVLIVQVGNPDKDHKCWERPESMAEERHSFR 814
            YAEALK ++ +F+ Q+SGKL  N +++WRGDSAL+DG D  +DLT G YDAGD+MKFGFP+AFT T+L+W+ +E   Q+    +   A  +LKW TDYLI AHPQ NVL  QVG  + DHKCW RPE M   R S+R
Sbjct:   34 YAEALKNSLLYFEAQRSGKLPPNQRVTWRGDSALRDGSDAHIDLTGGYYDAGDNMKFGFPLAFTTTMLAWSNIEMASQLRAHHEKGNALRALKWATDYLIKAHPQPNVLYGQVGEGNSDHKCWMRPEDMTTPRTSYR 170          

HSP 2 Score: 24.6386 bits (52), Expect = 5.220e-40
Identity = 11/27 (40.74%), Postives = 16/27 (59.26%), Query Frame = 1
Query:  802 TLIQVNKSFPGKKVAAETAPAMAFGSL 882
            T  +++   PG  +A ETA AMA  S+
Sbjct:  167 TSYRIDAQHPGSDLAGETAAAMAAASI 193          
BLAST of DY304573 vs. ExPASy Swiss-Prot
Match: GUN7_ORYSJ (Endoglucanase 7 OS=Oryza sativa subsp. japonica GN=GLU10 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 8.853e-40
Identity = 65/137 (47.45%), Postives = 97/137 (70.80%), Query Frame = 2
Query:  407 YAEALKVAMQFFDVQKSGKLVNN-KISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPQENVLIVQVGNPDKDHKCWERPESMAEERHSFR 814
            Y +AL+ ++ +F+ Q+SG+L +N +++WR  S L DG + G+DL  G YDAGDH+KFG PMAFT T+LSW+++EYGD ++   +L  A +++KW TDY I AH + N L  +VG+ D DH CW+RPE M   R +++
Sbjct:   37 YEDALRKSLLYFEAQRSGRLPHNQRVAWRDHSGLTDGLEQGVDLVGGYYDAGDHVKFGLPMAFTVTMLSWSMIEYGDDVEAAGELGHALEAIKWGTDYFIKAHTKPNELWAEVGDGDTDHYCWQRPEDMTTSRQAYK 173          

HSP 2 Score: 34.2686 bits (77), Expect = 8.853e-40
Identity = 16/32 (50.00%), Postives = 21/32 (65.62%), Query Frame = 1
Query:  811 QVNKSFPGKKVAAETAPAMAFGSLVVKKKCPH 906
            +V++  PG  VA ETA AMA  S+V +K  PH
Sbjct:  173 KVDRERPGSDVAGETAAAMAAASIVFRKSNPH 204          
BLAST of DY304573 vs. ExPASy Swiss-Prot
Match: GUN15_ORYSJ (Endoglucanase 15 OS=Oryza sativa subsp. japonica GN=Os05g0212300 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.500e-39
Identity = 72/137 (52.55%), Postives = 96/137 (70.07%), Query Frame = 2
Query:  407 YAEALKVAMQFFDVQKSGKLV-NNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPQENVLIVQVGNPDKDHKCWERPESMAEERHSFR 814
            YA AL+ ++ +F  Q+SG L  N ++SWR  S L DG+  G+DL  G YDAGD++KFG PMAFT T++SW+ILEYG QM    +L+ A D++KW TDY I AHP+ +VL  +VG+ D DH CW+RPE M   R +FR
Sbjct:   35 YAMALRKSILYFQAQRSGVLPPNQRVSWRASSGLFDGKANGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSILEYGKQMAAAGELRNAMDAVKWGTDYFIKAHPEPDVLYGEVGDGDTDHSCWQRPEDMTTSRQAFR 171          

HSP 2 Score: 28.4906 bits (62), Expect = 1.500e-39
Identity = 14/31 (45.16%), Postives = 19/31 (61.29%), Query Frame = 1
Query:  811 QVNKSFPGKKVAAETAPAMAFGSLVVKKKCP 903
            +V+   PG  +AAETA AMA  S+V +   P
Sbjct:  171 RVDPQHPGSDLAAETAAAMAAASIVFRGTYP 201          
The following BLAST results are available for this feature:
BLAST of DY304573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
GUN10_ARATH3.354e-6555.32Endoglucanase 10 OS=Arabidopsis thaliana GN=At1g75... [more]
GUN24_ORYSJ1.309e-6057.22Endoglucanase 24 OS=Oryza sativa subsp. japonica G... [more]
GUN2_ARATH2.903e-6063.35Endoglucanase 2 OS=Arabidopsis thaliana GN=At1g199... [more]
GUN18_ORYSJ4.073e-5669.63Endoglucanase 18 OS=Oryza sativa subsp. japonica G... [more]
GUN4_THEFU2.167e-4156.93Endoglucanase E-4 OS=Thermomonospora fusca GN=celD... [more]
GUN5_ORYSJ1.389e-4051.09Endoglucanase 5 OS=Oryza sativa subsp. japonica GN... [more]
GUN12_ARATH2.360e-4056.20Endoglucanase 12 OS=Arabidopsis thaliana GN=At2g44... [more]
GUN13_ARATH5.220e-4056.20Endoglucanase 13 OS=Arabidopsis thaliana GN=At2g44... [more]
GUN7_ORYSJ8.853e-4047.45Endoglucanase 7 OS=Oryza sativa subsp. japonica GN... [more]
GUN15_ORYSJ1.500e-3952.55Endoglucanase 15 OS=Oryza sativa subsp. japonica G... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAQ9YB09RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304573 ID=DY304573; Name=DY304573; organism=Citrus clementina; type=EST; length=953bp
AAAATTGATGATCTGATTTGTCCCAGACCCAGCTGCTTCAATTGTATTGT
ATTAGAGAATTTGCAAAACTGATTCAGCAGCCAAATTAAGCTTCTTACCA
CTCACATTTCACCCACTAGAGAGAAATACGGTGCTGCGTTTTTCACCGTT
TGAAGACCCTACGCACAAAGCTCTTACTCTCTTCACCCAATGCCGGCATT
TTGAGTTAGATTTAGATCTGAGAACTTGACGGCATTGTGTTAAAATGGGG
GAGAAATCAAAGTCCAAGGGTTGTTTCGGATGGTTCTTGGTCCTAGTCCT
ATTGGCTCTAGTTGTTGGCGCAATTGTTTACACTATTAAAAAGAAAACAA
GTCACTCTGATAAGCCGGCTCCAGTTCCCGGTCCCCCCGGCGCCGTCGAG
AAAAAGTATGCTGAAGCCCTCAAAGTCGCAATGCAGTTCTTCGACGTACA
AAAATCGGGAAAGTTGGTGAATAATAAGATATCATGGAGAGGGGATTCGG
CTCTTAAAGATGGAAGAGACATGGGTTTGGATCTCACAAAAGGCATGTAT
GATGCTGGGGATCATATGAAGTTTGGGTTTCCGATGGCTTTTACTGCGAC
TGTGTTGTCGTGGGCCATCCTTGAGTATGGAGATCAGATGGACGTTGTGG
ATCAGTTGCAACCAGCTCAAGATTCTCTCAAGTGGATCACTGATTATCTT
ATCAGTGCTCATCCCCAAGAGAATGTCCTTATTGTTCAGGTGGGCAATCC
TGATAAGGACCACAAATGTTGGGAAAGACCTGAAAGCATGGCTGAGGAGA
GACACTCATTCAGGTCAACAAATCCTTTCCTGGAAAAAAGGTGGCAGCTG
AAACGGCACCCGCCATGGCTTTCGGGTCCCTAGTTGTTAAAAAAAAGTGC
CCCCACGTATTCAAGTCCCCTACCTTACCTTGGCCACGCATTTGTTTAAT
TTT
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