DY304581

Overview
NameDY304581
Unique NameDY304581
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length905
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY304581 vs. ExPASy Swiss-Prot
Match: AFC2_ARATH (Serine/threonine-protein kinase AFC2 OS=Arabidopsis thaliana GN=AFC2 PE=1 SV=1)

HSP 1 Score: 446.432 bits (1147), Expect = 1.018e-124
Identity = 223/277 (80.51%), Postives = 246/277 (88.81%), Query Frame = 3
Query:   84 MEMERVTEFPFSNLDRRPRKRARLGWDV-PQA---QVGLFCGQEVGNVTSFAPPRAPSDHVTSSSLFVKGVARNGSPPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYI*VPDYKSSLHTPKDSSYF*RMPKSSAIKGIDFGSPNYE 902
            MEMERV EFP +++DRRPRKRARLGWDV PQA   QVG+FCGQE+GN++SFA   APSD+  SSSL VKGVARNGSPPWREDDKDGHY+F LG++LT RYKI+SKMGEGTFGQVLECWDRERKEMVA+KIVRG+KKYREAAMIEIE+LQQL KHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI  QLLEC+AFMHDL MIHTDLKPEN+LLVSS+Y+ +P+YK S    +D  Y  R+PKSSAIK IDFGS  YE
Sbjct:    1 MEMERVHEFPHTHMDRRPRKRARLGWDVLPQATKAQVGMFCGQEIGNISSFASSGAPSDN--SSSLCVKGVARNGSPPWREDDKDGHYIFELGDDLTPRYKIYSKMGEGTFGQVLECWDRERKEMVAVKIVRGVKKYREAAMIEIEMLQQLGKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIGWQLLECVAFMHDLRMIHTDLKPENILLVSSDYVKIPEYKGS-RLQRDVCYK-RVPKSSAIKVIDFGSTTYE 273          
BLAST of DY304581 vs. ExPASy Swiss-Prot
Match: AFC1_ARATH (Serine/threonine-protein kinase AFC1 OS=Arabidopsis thaliana GN=AFC1 PE=2 SV=2)

HSP 1 Score: 355.14 bits (910), Expect = 3.087e-97
Identity = 181/289 (62.63%), Postives = 212/289 (73.36%), Query Frame = 3
Query:   75 AAIMEMERVTEFPFSNLDRRPRKRARLGWDVPQA-----------QVGLFCGQEV--GNVTSFAPPRAPSDHVTSSSLFVKGVARNGSPPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYI*VPDYKSSLHTPKDSSYF*RMPKSSAIKGIDFGSPNYE 902
            A I+E +R  EFP   +D+RPRKR RL WD               Q  L+ G E   G V +F  P          ++F  G+ R GSPPWR DDKDGHY+F +G+ LT RY+I SKMGEGTFGQVLEC+D + KE+VAIK++R I KYREAAMIEI+VLQ+L +HD GG+RCVQIRNWFDYRNHICIVFEKLG SLYDFLRKN+YRSFPIDLVRE+ RQLLE +A+MHDL +IHTDLKPEN+LLVSSEYI +PDYK      KD SYF  +PKSSAIK IDFGS  +E
Sbjct:   14 AMILETQRNVEFPHRIVDKRPRKRPRLTWDAAPPLLPPPPPPTVFQPPLYYGPEFASGLVPNFVYP----------NMFYNGLPRQGSPPWRPDDKDGHYVFVVGDTLTPRYQILSKMGEGTFGQVLECFDNKNKEVVAIKVIRSINKYREAAMIEIDVLQRLTRHDVGGSRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAYMHDLRLIHTDLKPENILLVSSEYIKIPDYKFLSRPTKDGSYFKNLPKSSAIKLIDFGSTTFE 292          
BLAST of DY304581 vs. ExPASy Swiss-Prot
Match: AFC3_ARATH (Serine/threonine-protein kinase AFC3 OS=Arabidopsis thaliana GN=AFC3 PE=2 SV=2)

HSP 1 Score: 283.493 bits (724), Expect = 1.142e-75
Identity = 148/263 (56.27%), Postives = 189/263 (71.86%), Query Frame = 3
Query:  114 FSNLDR-RPRKRARLGWDVPQAQVGLFCGQEVGNVTSFAPPRAPSDHVTSSSLFVKGVARNG---SPPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYI*VPDYKSSLHTPKDSSYF*RMPKSSAIKGIDFGS 890
            F ++D+ R RKR R+ WD                        AP++     ++ +KG   +G   SPP R+DD+DGHY+F+L +NLT RYKI SKMGEGTFG+VLECWDR+ KE VAIKI+R IKKYR+AAMIEI+VLQ+L K DKG  RCVQ++NWFDYRNHICIVFEKLG SL+DFL++N Y +FP+ LVR+   QLLE +A+MH+L ++HTDLKPEN+LLVSSE + +PD K S     + ++F  +PKSSAIK IDFGS
Sbjct:    6 FESMDKERVRKRPRMTWD-----------------------EAPAEPEAKRAV-IKGHGSDGRILSPPLRDDDRDGHYVFSLRDNLTPRYKILSKMGEGTFGRVLECWDRDTKEYVAIKIIRSIKKYRDAAMIEIDVLQKLVKSDKGRTRCVQMKNWFDYRNHICIVFEKLGPSLFDFLKRNKYSAFPLALVRDFGCQLLESVAYMHELQLVHTDLKPENILLVSSENVKLPDNKRS---AANETHFRCLPKSSAIKLIDFGS 241          
BLAST of DY304581 vs. ExPASy Swiss-Prot
Match: DOA_DROME (Serine/threonine-protein kinase Doa OS=Drosophila melanogaster GN=Doa PE=1 SV=2)

HSP 1 Score: 176.407 bits (446), Expect = 1.965e-43
Identity = 88/201 (43.78%), Postives = 133/201 (66.17%), Query Frame = 3
Query:  303 PWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR-CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYI*VPDYKSSLHTPKDSSYF*RMPKSSAIKGIDFGSPNYE 902
            P  +DD DGH ++  G+ L  RYKI + +GEGTFG+V++  D ER   +A+KI++ ++KYREAA +EI  L+++A+ D   +  CV++ +WFDY  H+CIVFE LG S++DFLR+NNY  +P+D VR +A QL   + F+HD  + HTDLKPEN+L V S+Y    ++K +           R  K++ ++ IDFGS  ++
Sbjct:  457 PVIQDDADGHLIYHTGDILHHRYKIMATLGEGTFGRVVKVKDMERDYCMALKIIKNVEKYREAAKLEINALEKIAQKDPHCDHLCVKMIDWFDYHGHMCIVFEMLGLSVFDFLRENNYEPYPLDQVRHMAYQLCYSVKFLHDNRLTHTDLKPENILFVDSDYTSHYNHKINREV--------RRVKNTDVRLIDFGSATFD 649          
BLAST of DY304581 vs. ExPASy Swiss-Prot
Match: CLK2_HUMAN (Dual specificity protein kinase CLK2 OS=Homo sapiens GN=CLK2 PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.965e-43
Identity = 89/199 (44.72%), Postives = 133/199 (66.83%), Query Frame = 3
Query:  312 EDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERK-EMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGG-NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYI*VPDYKSSLHTPKDSSYF*RMPKSSAIKGIDFGSPNYE 902
            EDD +GH ++ +G+ L  RY+I S +GEGTFG+V++C D  R    VA+KI++ ++KY+EAA +EI VL+++ + D    N CVQ+ +WFDY  H+CI FE LG S +DFL+ NNY  +PI  VR +A QL + + F+HD  + HTDLKPEN+L V+S+Y    +   +L   +D     R  KS+A++ +DFGS  ++
Sbjct:  144 EDDAEGHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDY----ELTYNLEKKRDE----RSVKSTAVRVVDFGSATFD 334          
BLAST of DY304581 vs. ExPASy Swiss-Prot
Match: CLK2_MOUSE (Dual specificity protein kinase CLK2 OS=Mus musculus GN=Clk2 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.664e-42
Identity = 88/199 (44.22%), Postives = 132/199 (66.33%), Query Frame = 3
Query:  312 EDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERK-EMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGG-NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYI*VPDYKSSLHTPKDSSYF*RMPKSSAIKGIDFGSPNYE 902
            EDD +GH ++ +G+ L  RY+I S +GEGT G+V++C D  R    VA+KI++ ++KY+EAA +EI VL+++ + D    N CVQ+ +WFDY  H+CI FE LG S +DFL+ NNY  +PI  VR +A QL + + F+HD  + HTDLKPEN+L V+S+Y    +   +L   +D     R  KS+A++ +DFGS  ++
Sbjct:  143 EDDAEGHLIYHVGDWLQERYEIVSTLGEGTSGRVVQCVDHRRGGTRVALKIIKNVEKYKEAARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDY----ELTYNLEKKRDE----RSVKSTAVRVVDFGSATFD 333          
BLAST of DY304581 vs. ExPASy Swiss-Prot
Match: LKH1_SCHPO (Dual specificity protein kinase lkh1 OS=Schizosaccharomyces pombe GN=lkh1 PE=1 SV=3)

HSP 1 Score: 171.014 bits (432), Expect = 8.257e-42
Identity = 99/259 (38.22%), Postives = 144/259 (55.60%), Query Frame = 3
Query:  129 RRPRKRARLGWDVPQAQVGLFCGQEVGNVTSFAPPRAPSDHVTSSSLFVKGVARNGSPPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGG-NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYI*VPDYKSSLHTPKDSSYF*RMPKSSAIKGIDFGSPNYE 902
            R P+KR R  W  P  +V       V + T+F P           S F              DD DGHY         +RY +   +G GTFG+V++C+D+      AIK+ R I KYREA++IE+ VLQ +A  D    N+C+Q+R++FDYR HICIV +  G S++DFL+ NNY  FP+  ++ +++QL + +AF+H L ++HTDLKPENVLLVS+          ++  P   +Y  ++  S  I+ IDFGS  +E
Sbjct:  308 RPPKKRKRAAWP-PYKKVDRVNVPVVHDTTAFDP-----------STF--------------DDDDGHYKVVPNSKFANRYTVVRLLGHGTFGKVIQCYDQSTGRHCAIKVTRAIPKYREASLIELRVLQTIAHSDPTNENKCIQLRDYFDYRKHICIVTDLFGWSVFDFLKNNNYIPFPLKHIQMLSQQLFKSVAFLHSLGLVHTDLKPENVLLVSNA-------SRTIRLPY-RNYSQKVLNSCEIRLIDFGSATFE 532          
BLAST of DY304581 vs. ExPASy Swiss-Prot
Match: CLK4_HUMAN (Dual specificity protein kinase CLK4 OS=Homo sapiens GN=CLK4 PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 9.130e-41
Identity = 96/228 (42.11%), Postives = 137/228 (60.09%), Query Frame = 3
Query:  225 APPRAPSDHVTSSSLFVKGVARNGSPPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEM-VAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN-RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYI*VPDYKSSLHTPKDSSYF*RMPKSSAIKGIDFGSPNYE 902
            +P R  + H +S     K   R  S    EDD++GH +   G+ L +RY+I   +GEG FG+V+EC D     M VA+KIV+ + +YREAA  EI+VL+ L   D     RCVQ+  WFD+  H+CIVFE LG S YDF+++N++  F ID +R++A Q+ + I F+H   + HTDLKPEN+L V S+Y  V  Y S +   +      R  K++ IK +DFGS  Y+
Sbjct:  112 SPKRKRNRHCSSHQSRSKSHRRKRSRSI-EDDEEGHLICQSGDVLRARYEIVDTLGEGAFGKVVECIDHGMDGMHVAVKIVKNVGRYREAARSEIQVLEHLNSTDPNSVFRCVQMLEWFDHHGHVCIVFELLGLSTYDFIKENSFLPFQIDHIRQMAYQICQSINFLHHNKLTHTDLKPENILFVKSDY--VVKYNSKMKRDE------RTLKNTDIKVVDFGSATYD 330          
BLAST of DY304581 vs. ExPASy Swiss-Prot
Match: CLK4_MOUSE (Dual specificity protein kinase CLK4 OS=Mus musculus GN=Clk4 PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.469e-40
Identity = 88/199 (44.22%), Postives = 127/199 (63.82%), Query Frame = 3
Query:  312 EDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEM-VAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN-RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYI*VPDYKSSLHTPKDSSYF*RMPKSSAIKGIDFGSPNYE 902
            EDD++GH +   G+ L +RY+I   +GEG FG+V+EC D     + VA+KIV+ + +YREAA  EI+VL+ L   D     RCVQ+  WFD+  H+CIVFE LG S YDF+++N++  F ID +R++A Q+ + I F+H   + HTDLKPEN+L V S+Y  V  Y S +   +      R  K++ IK +DFGS  Y+
Sbjct:  140 EDDEEGHLICQSGDVLRARYEIVDTLGEGAFGKVVECIDHGMDGLHVAVKIVKNVGRYREAARSEIQVLEHLNSTDPNSVFRCVQMLEWFDHHGHVCIVFELLGLSTYDFIKENSFLPFQIDHIRQMAYQICQSINFLHHNKLTHTDLKPENILFVKSDY--VVKYNSKMKRDE------RTLKNTDIKVVDFGSATYD 330          
BLAST of DY304581 vs. ExPASy Swiss-Prot
Match: CLK3_RAT (Dual specificity protein kinase CLK3 OS=Rattus norvegicus GN=Clk3 PE=2 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 7.729e-40
Identity = 83/199 (41.71%), Postives = 131/199 (65.83%), Query Frame = 3
Query:  312 EDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRER-KEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN-RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYI*VPDYKSSLHTPKDSSYF*RMPKSSAIKGIDFGSPNYE 902
            EDDK+GH +  +G+ L  RY+I   +GEGTFG+V+EC D  R K  VA+KI+R + KYREAA +EI VL+++ + DK     CV + +WF++  H+CI FE LG + ++FL++NN++ +P+  VR +A QL   + F+H+  + HTDLKPEN+L V+SE+        +L+  +  S   +  K+++I+  DFGS  ++
Sbjct:  137 EDDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEF-------ETLYN-EHKSCEEKSVKNTSIRVADFGSATFD 327          
The following BLAST results are available for this feature:
BLAST of DY304581 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
AFC2_ARATH1.018e-12480.51Serine/threonine-protein kinase AFC2 OS=Arabidopsi... [more]
AFC1_ARATH3.087e-9762.63Serine/threonine-protein kinase AFC1 OS=Arabidopsi... [more]
AFC3_ARATH1.142e-7556.27Serine/threonine-protein kinase AFC3 OS=Arabidopsi... [more]
DOA_DROME1.965e-4343.78Serine/threonine-protein kinase Doa OS=Drosophila ... [more]
CLK2_HUMAN1.965e-4344.72Dual specificity protein kinase CLK2 OS=Homo sapie... [more]
CLK2_MOUSE1.664e-4244.22Dual specificity protein kinase CLK2 OS=Mus muscul... [more]
LKH1_SCHPO8.257e-4238.22Dual specificity protein kinase lkh1 OS=Schizosacc... [more]
CLK4_HUMAN9.130e-4142.11Dual specificity protein kinase CLK4 OS=Homo sapie... [more]
CLK4_MOUSE3.469e-4044.22Dual specificity protein kinase CLK4 OS=Mus muscul... [more]
CLK3_RAT7.729e-4041.71Dual specificity protein kinase CLK3 OS=Rattus nor... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAQ9YB18RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304581 ID=DY304581; Name=DY304581; organism=Citrus clementina; type=EST; length=905bp
CTTATCTTCGTTATTTTATTCGTTCGTTTCAATCGCATCAAGATCTCGAT
CTCTCTCTTATTTCCTCGCCGTGAGCTGCGATCATGGAGATGGAGCGCGT
GACGGAGTTTCCTTTTTCGAATCTGGATCGGCGTCCTCGTAAGCGAGCGC
GTTTGGGCTGGGACGTGCCTCAGGCTCAGGTAGGATTATTTTGTGGACAA
GAGGTTGGGAATGTAACAAGCTTTGCACCTCCAAGAGCTCCCTCAGACCA
TGTCACTAGTTCTTCTCTATTTGTAAAGGGAGTGGCTCGAAATGGTTCTC
CCCCATGGCGTGAGGATGACAAAGATGGCCATTATATGTTTGCGCTTGGA
GAAAATTTAACTTCTCGCTATAAGATTCACAGCAAAATGGGTGAAGGAAC
CTTCGGTCAGGTTTTGGAATGCTGGGATCGTGAGAGGAAAGAAATGGTAG
CCATTAAAATTGTTCGTGGGATCAAGAAATATCGTGAGGCTGCTATGATA
GAAATTGAAGTACTTCAACAACTTGCAAAACATGATAAAGGTGGCAACCG
TTGTGTGCAAATACGGAACTGGTTTGACTATCGTAACCATATCTGTATTG
TGTTTGAGAAGCTTGGATCTAGCTTATACGATTTTCTACGGAAAAACAAT
TATCGCTCATTTCCCATTGATCTTGTCCGTGAGATTGCCAGACAACTGTT
GGAATGTATAGCATTTATGCATGATCTGTGTATGATACATACTGACTTAA
AGCCTGAGAACGTTCTACTTGTTTCCTCCGAGTATATTTAGGTTCCTGAC
TACAAAAGTTCCTTGCACACCCCAAAAGATTCTTCCTACTTTTAAAGAAT
GCCAAAGTCAAGTGCTATTAAGGGGATTGATTTTGGCAGCCCAAACTATG
AACCC
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