DY304582

Overview
NameDY304582
Unique NameDY304582
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length923
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY304582 vs. ExPASy Swiss-Prot
Match: CCR4C_ARATH (Carbon catabolite repressor protein 4 homolog 3 OS=Arabidopsis thaliana GN=CCR4-3 PE=2 SV=2)

HSP 1 Score: 222.246 bits (565), Expect = 2.415e-68
Identity = 106/170 (62.35%), Postives = 131/170 (77.06%), Query Frame = 3
Query:  243 YCRRWYNPLRRK--PFDEPSPDVLRHWIDADPNPISSQ-ERFSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEVDRYFDILNVMEKAGYAGCYKRRTGDNVDGCAMFWKADKFRLLEQTSIEFKEFGLRENVAQLSAFEADAQHKNQE 743
            Y RRW NPL R+  P   PS  + R WID+D  P+S   ERF+VVSYNILGD N+  HR+LY NV   Y+KW  RKRLIC+ELI LNPDII MQEVD+YFD+ ++MEKAGYAG YKRRTGDNVDGCAMFWKAD+F +LE+ +IEF +FG+R+NVAQL+  E    +K+++
Sbjct:   68 YSRRWQNPLPRRQHPDQIPSSQIARDWIDSDTTPVSQALERFTVVSYNILGDGNSSYHRELYSNVSVPYLKWGYRKRLICEELIRLNPDIISMQEVDKYFDLFSMMEKAGYAGSYKRRTGDNVDGCAMFWKADRFGVLERENIEFSQFGMRDNVAQLAVLELRKSNKSRK 237          

HSP 2 Score: 58.9214 bits (141), Expect = 2.415e-68
Identity = 26/50 (52.00%), Postives = 37/50 (74.00%), Query Frame = 2
Query:  728 TQKSRRVLVGNIHVL*NPNRGEVKLS*ICFLSSRGQIVAKKWGKIPGCAC 877
            + KSR++L+GNIHVL NPN+G+VKL  +  L S+  +++KKWG IP   C
Sbjct:  232 SNKSRKILLGNIHVLYNPNQGDVKLGQVRSLCSKAHLLSKKWGDIPIVLC 281          
BLAST of DY304582 vs. ExPASy Swiss-Prot
Match: CCR4E_ARATH (Carbon catabolite repressor protein 4 homolog 5 OS=Arabidopsis thaliana GN=CCR4-5 PE=2 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 6.622e-40
Identity = 66/153 (43.14%), Postives = 100/153 (65.36%), Query Frame = 3
Query:  270 RRKPFDEPSPDVLRHWIDADPNPISSQERFSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEVDRYFDILNVMEKAGYAGCYKRRTGDNVDGCAMFWKADKFRLLEQTSIEFKEFGLRENVAQLSAFEADAQ 728
            RR+  ++ S  V R W+ +  N  +  ++  +VSYN+LG  NA  H DLY NV  ++++W+RRK LIC+E+   N  I+C+QEVDR+ D+  +++  G+ G +K RTG+  DGCA+FWK + F LL+   IEF +FG+R NVAQL   E + +
Sbjct:   71 RRRTKEKISSSVEREWVFSANNFENLADKLVLVSYNLLGVDNASNHMDLYYNVPRKHLEWSRRKHLICKEISRYNASILCLQEVDRFDDLDVLLKNRGFRGVHKSRTGEASDGCAIFWKENLFELLDHQHIEFDKFGMRNNVAQLCVLEMNCE 223          

HSP 2 Score: 46.2098 bits (108), Expect = 6.622e-40
Identity = 20/49 (40.82%), Postives = 31/49 (63.27%), Query Frame = 2
Query:  719 RCATQKSRRVLVGNIHVL*NPNRGEVKLS*ICFLSSRGQIVAKKWGKIP 865
            R  +   RR++VGNIHVL NP RG++KL  +     +   ++++WG IP
Sbjct:  231 RVRSSDPRRLVVGNIHVLFNPKRGDIKLGQVRLFLEKAYKLSQEWGNIP 279          
BLAST of DY304582 vs. ExPASy Swiss-Prot
Match: CCR4F_ARATH (Carbon catabolite repressor protein 4 homolog 6 OS=Arabidopsis thaliana GN=CCR4-6 PE=2 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 1.910e-32
Identity = 62/150 (41.33%), Postives = 93/150 (62.00%), Query Frame = 3
Query:  270 RRKPFDEPSPDVLRHWIDADPNPISSQERFSVVSYNILGDKNAFKH-RDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEVDRYFDILNVMEKAGYAGCYKRRTGDNVDGCAMFWKADKFRLLEQTSIEFKEFGLRENVAQLSAFE 716
            R++P  +PS    R W  A   P    E+F V+SYNIL D  A  H R LY ++    + W  RK  +  EL   + DI+C+QEVD++ D+   M+  GY+  +K RTG+ VDGCA+FW++++F+L+ + SI+F + GLR+NVAQ+   E
Sbjct:  156 RQRPRSKPSD--YREWEYAKTPPSPGSEKFVVLSYNILADYLANDHWRSLYFHIPRNMLSWGWRKSKLVFELSLWSADIMCLQEVDKFQDLEEEMKHRGYSAIWKMRTGNAVDGCAIFWRSNRFKLVHEESIQFNQLGLRDNVAQICVLE 303          

HSP 2 Score: 40.4318 bits (93), Expect = 1.910e-32
Identity = 20/47 (42.55%), Postives = 26/47 (55.32%), Query Frame = 2
Query:  737 SRRVLVGNIHVL*NPNRGEVKLS*ICFLSSRGQIVAKKWGKIPGCAC 877
            S RV++ NIHVL NP RG+ KL  +  L  +   V+K W   P   C
Sbjct:  324 SHRVVICNIHVLFNPKRGDFKLGQVRTLLDKAHAVSKLWDDAPIVLC 370          
BLAST of DY304582 vs. ExPASy Swiss-Prot
Match: ANGEL_DROME (Protein angel OS=Drosophila melanogaster GN=angel PE=1 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.550e-19
Identity = 72/230 (31.30%), Postives = 115/230 (50.00%), Query Frame = 3
Query:  288 EPSPDVLRHWIDA-------DPNPISSQERFSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEVDRYFDILNVM---------EKAGYAGCYKRRTGDNVDGCAMFWKADKFRLLEQTSIEFKEFGL----RENVAQLSAFEADAQHKNQEEYWLVTYTFFKIQTEGK*N*VKFVFFLQGDKSLPKNGVKSLVVLAGEFNNPPSKCNLQ 917
            E S D  R W          DP+  SS   F VVSYNIL      +H  LY  + +E++ W RR++ + +EL+ L+PDI+C+QE+   FD L V+         +K  Y   YK++TG   DGCA+ + + KF LL+  ++E  +  +    R+NVA  + F    Q + Q+E+ +V  T     T  K + V+     +  + L      + +VL G+FN+ P    ++
Sbjct:   41 ESSHDRNRRWTSLGNQAEGRDPHKCSS---FKVVSYNILAQDLLLEHLFLYVGIPHEFLSWQRRQQNLLRELLKLDPDILCLQEMQ--FDHLPVLVQRLRMGNGKKLAYV--YKKKTGCRTDGCAIVYDSSKFELLDHQAVELYDQAVALLNRDNVALFARFRFKKQQEQQKEF-VVATTHLLFNT--KRSDVRCAQVERILEELQSFSTDTPIVLTGDFNSLPDSSPIE 260          
BLAST of DY304582 vs. ExPASy Swiss-Prot
Match: ANGE1_RAT (Protein angel homolog 1 OS=Rattus norvegicus GN=Angel1 PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 3.120e-17
Identity = 54/159 (33.96%), Postives = 83/159 (52.20%), Query Frame = 3
Query:  267 LRRKPFDEPSPDVL-RHWIDADPNPISS--------QERFSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEV--DRYFDILN-VMEKAGYAGCYKRRTGDNVDGCAMFWKADKFRLLEQTSIEFKEFGL----RENV 695
            L+  P + P  ++L R W D    P +         Q +F+++SYNIL      +  +LY +   + + WN R   + QE    +PDI+C+QEV  D Y++ L   +   G+   YKRRTG   DGCA+ +K  +FRLL  + +E+   GL    R+NV
Sbjct:  203 LQPPPMEIPYHEILWREWEDFSTQPDAQGLEAGDGPQFQFTLMSYNILAQDLMQQSSELYLHCHPDILNWNYRFANLMQEFQHWDPDILCLQEVQEDHYWEQLEPSLRMMGFTCFYKRRTGCKTDGCAVCYKPTRFRLLCASPVEYFRPGLELLNRDNV 361          

HSP 2 Score: 29.6462 bits (65), Expect = 3.120e-17
Identity = 15/32 (46.88%), Postives = 20/32 (62.50%), Query Frame = 2
Query:  752 VGNIHVL*NPNRGEVKLS*ICFLSSRGQIVAK 847
            V N HVL NP RG+VKL+ +  L +    VA+
Sbjct:  385 VANTHVLYNPRRGDVKLAQMAILLAEVDKVAR 416          
BLAST of DY304582 vs. ExPASy Swiss-Prot
Match: ANGE1_MOUSE (Protein angel homolog 1 OS=Mus musculus GN=Angel1 PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 3.120e-17
Identity = 54/159 (33.96%), Postives = 83/159 (52.20%), Query Frame = 3
Query:  267 LRRKPFDEPSPDVL-RHWIDADPNPISS--------QERFSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEV--DRYFDILN-VMEKAGYAGCYKRRTGDNVDGCAMFWKADKFRLLEQTSIEFKEFGL----RENV 695
            L+  P + P  ++L R W D    P +         Q +F+++SYNIL      +  +LY +   + + WN R   + QE    +PDI+C+QEV  D Y++ L   +   G+   YKRRTG   DGCA+ +K  +FRLL  + +E+   GL    R+NV
Sbjct:  203 LQPPPMEIPYHEILWREWEDFSTQPDAQGLEAGDGPQFQFTLMSYNILAQDLMQQSSELYLHCHPDILNWNYRFANLMQEFQHWDPDILCLQEVQEDHYWEQLEPSLRMMGFTCFYKRRTGCKTDGCAVCYKPTRFRLLCASPVEYFRPGLELLNRDNV 361          

HSP 2 Score: 29.6462 bits (65), Expect = 3.120e-17
Identity = 15/32 (46.88%), Postives = 20/32 (62.50%), Query Frame = 2
Query:  752 VGNIHVL*NPNRGEVKLS*ICFLSSRGQIVAK 847
            V N HVL NP RG+VKL+ +  L +    VA+
Sbjct:  385 VANTHVLYNPRRGDVKLAQMAILLAEVDKVAR 416          
BLAST of DY304582 vs. ExPASy Swiss-Prot
Match: CCR4_CRYNE (Glucose-repressible alcohol dehydrogenase transcriptional effector OS=Cryptococcus neoformans GN=CCR4 PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.573e-16
Identity = 66/200 (33.00%), Postives = 94/200 (47.00%), Query Frame = 3
Query:  291 PSPDVLRHWIDADPN---PISS-QERFSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEVD--RYFDILNVM-EKAGYAGCYKRRTGDN---------VDGCAMFWKADKFRLLEQTSIEFKEFGL----------------RENVAQLSAFEADAQH-----KNQEEYWLVTYTFFKI 779
            P P   R WID + +   P S  QE FSV++YNIL    +F     Y       + W+ RKRL+ +E++  + D++C+QE+D  +Y D    M +K GY G +  R+            VDGCA FWK +KFRL+E   IEF +  L                R+N+A ++A E  A        N   YW   Y   K+
Sbjct:  363 PPPPPERQWIDLETDVDTPTSGKQESFSVLTYNILCA--SFAPATTYSYTPSWALDWDYRKRLLLEEIVTASADVVCLQEIDCKQYADYFYPMLKKEGYEGQHYPRSRAKTMSVDEQKLVDGCATFWKEEKFRLVETQVIEFNQLALQKTDMRTEDMFNRVMSRDNIAVVAALEFRASGGRLLVANSHIYWDHRYRDVKL 560          
BLAST of DY304582 vs. ExPASy Swiss-Prot
Match: ANGE1_HUMAN (Protein angel homolog 1 OS=Homo sapiens GN=ANGEL1 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.581e-16
Identity = 50/144 (34.72%), Postives = 75/144 (52.08%), Query Frame = 3
Query:  309 RHWIDADPNPISS--------QERFSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEV--DRYFDILN-VMEKAGYAGCYKRRTGDNVDGCAMFWKADKFRLLEQTSIEFKEFGL----RENV 695
            R W D    P +         Q +F+++SYNIL      +  +LY +   + + WN R   + QE    +PDI+C+QEV  D Y++ L   +   G+   YKRRTG   DGCA+ +K  +FRLL  + +E+   GL    R+NV
Sbjct:  221 REWEDFSTQPDAQGLKAGDGPQFQFTLMSYNILAQDLMQQSSELYLHCHPDILNWNYRFVNLMQEFQHWDPDILCLQEVQEDHYWEQLEPSLRMMGFTCFYKRRTGCKTDGCAVCYKPTRFRLLCASPVEYFRPGLELLNRDNV 364          

HSP 2 Score: 29.261 bits (64), Expect = 5.581e-16
Identity = 14/32 (43.75%), Postives = 20/32 (62.50%), Query Frame = 2
Query:  752 VGNIHVL*NPNRGEVKLS*ICFLSSRGQIVAK 847
            V N H+L NP RG+VKL+ +  L +    VA+
Sbjct:  388 VANTHILYNPRRGDVKLAQMAILLAEVDKVAR 419          
BLAST of DY304582 vs. ExPASy Swiss-Prot
Match: CCR4_PHANO (Glucose-repressible alcohol dehydrogenase transcriptional effector OS=Phaeosphaeria nodorum GN=CCR4 PE=3 SV=2)

HSP 1 Score: 65.4698 bits (158), Expect = 7.683e-15
Identity = 43/132 (32.58%), Postives = 62/132 (46.97%), Query Frame = 3
Query:  309 RHWIDADPNPISSQERFSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEVDR------------YFDILNVMEKAGYAGCYKRRTGDNVDGCAMFWKADKFRLLEQTSIEF 668
            R WI  D     +QE  + +SYNIL DK   + +  Y       + W  R+ LI  EL   N DI+C+QE+D+            ++D   V      A     R    VDGCA+F+K  K+ LL++  I+F
Sbjct:  205 RDWIVLDEITDPAQETVTALSYNILCDKYCTQSQ--YGYTPSSALAWETRRELILGELKQRNADIVCLQEIDQDSFNEYFREKLAHYDYKGVFWPKSRARTMAEREAKLVDGCAIFYKNSKYVLLDKQLIDF 334          

HSP 2 Score: 36.1946 bits (82), Expect = 7.683e-15
Identity = 18/43 (41.86%), Postives = 22/43 (51.16%), Query Frame = 2
Query:  743 RVLVGNIHVL*NPNRGEVKLS*ICFLSSRGQIVAKKWGKIPGC 871
            R +VGN+HV  NP   +VKL  +  L       A KW K P C
Sbjct:  374 RFIVGNVHVFWNPAFTDVKLVQVAILMEGISKFATKWSKFPPC 416          
BLAST of DY304582 vs. ExPASy Swiss-Prot
Match: NOCT_RAT (Nocturnin (Fragment) OS=Rattus norvegicus GN=Ccrn4l PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.560e-14
Identity = 58/212 (27.36%), Postives = 97/212 (45.75%), Query Frame = 3
Query:  297 PDVLRHWIDADPNPISSQERFSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEVDRYFDILN-VMEKAGYAG---------CYKRRTGDNVDGCAMFWKADKFRLLEQTSIEFKEFGLRENVAQLSAFEADAQHKNQEEYWLVTYTFFKIQTE-GK*N*VKFVFFLQGDKSLPKNGVKSLVVLAGEFNNPP 899
            P   R ++D   +  SS     V+ +NIL      + +D +     E +KW  RK LI +E++   PDI+C+QEVD YFD L  ++ + GY G         C      +  DGCA+F+   +F+L+  T+I      L+ N     A     + K     + +  T  K +T   +    +    LQ  +++ + G K  +++ G+FN  P
Sbjct:   47 PRYQRDFVDLRTDCSSSHPPIRVMQWNILAQALG-EGKDNFVQCPVEALKWEERKCLILEEILAYQPDILCLQEVDHYFDTLQPLLSRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQSRFKLINSTNIRLTAMTLKTNQV---AIAQTLECKESGRQFCIAVTHLKARTGWERFRSAQGCDLLQSLQNITE-GAKIPLIVCGDFNAEP 253          
The following BLAST results are available for this feature:
BLAST of DY304582 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
CCR4C_ARATH2.415e-6862.35Carbon catabolite repressor protein 4 homolog 3 OS... [more]
CCR4E_ARATH6.622e-4043.14Carbon catabolite repressor protein 4 homolog 5 OS... [more]
CCR4F_ARATH1.910e-3241.33Carbon catabolite repressor protein 4 homolog 6 OS... [more]
ANGEL_DROME1.550e-1931.30Protein angel OS=Drosophila melanogaster GN=angel ... [more]
ANGE1_RAT3.120e-1733.96Protein angel homolog 1 OS=Rattus norvegicus GN=An... [more]
ANGE1_MOUSE3.120e-1733.96Protein angel homolog 1 OS=Mus musculus GN=Angel1 ... [more]
CCR4_CRYNE3.573e-1633.00Glucose-repressible alcohol dehydrogenase transcri... [more]
ANGE1_HUMAN5.581e-1634.72Protein angel homolog 1 OS=Homo sapiens GN=ANGEL1 ... [more]
CCR4_PHANO7.683e-1532.58Glucose-repressible alcohol dehydrogenase transcri... [more]
NOCT_RAT2.560e-1427.36Nocturnin (Fragment) OS=Rattus norvegicus GN=Ccrn4... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAQ9YB19RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304582 ID=DY304582; Name=DY304582; organism=Citrus clementina; type=EST; length=923bp
CAAACATTCGGGAGAGAGAGTGGTTACTTGTGGATCAATCAATGAGGTCC
GAAGCCACTTCCTCCTCTTCTTGGCTCGGCCGGATCCCACCAACGGCCAC
CTCCGCGCCGAGCGGCGGCTCCGGCAAGTGCCGGCACTTCATCTTCTTCT
CCTCCTCCTGCTGCAAGACTACAAACACCATTTCCTGTGGCTTCAATGGT
CCCACCACACATTCCTCATCATCATCGCCGTCAACTCGTTCGTACTGCCG
TCGATGGTACAACCCTCTCCGACGTAAGCCGTTCGATGAGCCTTCTCCTG
ACGTCCTCCGCCACTGGATCGACGCTGATCCTAATCCAATTTCATCTCAA
GAGAGATTCTCGGTCGTGTCATATAACATATTGGGAGATAAAAATGCTTT
CAAACATAGAGATTTATATCAAAATGTTCGGTATGAATACATGAAATGGA
ACCGTCGCAAAAGGTTAATATGCCAAGAGTTGATTGGATTGAACCCGGAT
ATTATCTGTATGCAAGAGGTGGACAGGTATTTTGATATTCTGAATGTTAT
GGAGAAAGCGGGATATGCTGGTTGTTACAAGCGGCGCACTGGGGATAACG
TTGATGGTTGTGCGATGTTTTGGAAAGCTGATAAGTTTCGGTTATTAGAG
CAAACAAGCATTGAATTTAAAGAGTTTGGCCTTCGTGAAAATGTGGCACA
ACTTTCCGCTTTTGAGGCAGATGCGCAACACAAAAATCAAGAAGAGTACT
GGTTGGTAACATACACGTTCTTTAAAATCCAAACCGAGGGGAAGTGAAAT
TAAGTTAAATTTGTTTTCTTTCTTCAAGGGGACAAATCGTTGCCAAAAAA
TGGGGTAAAATCCCTGGTTGTGCTTGCTGGTGAATTCAATAACCCTCCCT
CCAAGTGCAATTTACAAATTTCT
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