DY304593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY304593 vs. ExPASy Swiss-Prot
Match: FLA17_ARATH (Fasciclin-like arabinogalactan protein 17 OS=Arabidopsis thaliana GN=FLA17 PE=2 SV=1) HSP 1 Score: 259.996 bits (663), Expect = 1.124e-75 Identity = 138/208 (66.35%), Postives = 166/208 (79.81%), Query Frame = 3 Query: 30 LLMFIFPLQLTASMQLQGNNA--THSGQINSNSVLVALLDSHYTELSELVEKALLLQPLEDAVGKHSITIFAPKNEALERDLDPEFKRFLLEPGNLKSLQTLLLHHIVSTRIELNRTATEST---QHHTLSSDSVELTSHDSGDKFISQSKVIHPNAVDRPDGVIHGIERLLIPRSVQQDFNNRRNLRSISAVRPEGAPEVDPRTNRL 638 L +F L +A+ L N + + SGQINSNSVLVALLDS YTEL+ELVEKALLLQ LEDAVG+H+ITIFAP+NEALERDLDPEFKRFLLEPGNLKSLQTLL+ HI+ R+ N+ +E + +HHTL +D V L S+ G K + +++I P+ + RPDG+IHGIERLLIPRSVQ+DFN RR+L+SISAV PEGAPEVDPRTNRL Sbjct: 14 LFLFFSVLIFSAASALSKNQSPSSGSGQINSNSVLVALLDSRYTELAELVEKALLLQTLEDAVGRHNITIFAPRNEALERDLDPEFKRFLLEPGNLKSLQTLLMFHIIPNRVGSNQWPSEESGRVKHHTLGNDQVRL-SNGQGKKMVDLAEIIRPDDLTRPDGLIHGIERLLIPRSVQEDFNRRRSLQSISAVLPEGAPEVDPRTNRL 220 HSP 2 Score: 45.8246 bits (107), Expect = 1.124e-75 Identity = 19/32 (59.38%), Postives = 24/32 (75.00%), Query Frame = 2 Query: 740 GPGRPHHHFNGKKQLKEFIQTLLTYRGYNKWA 835 GPG HHF+G+ Q+K+FI TLL Y GYN+ A Sbjct: 254 GPGGKQHHFDGEAQVKDFIHTLLHYGGYNEMA 285
BLAST of DY304593 vs. ExPASy Swiss-Prot
Match: FLA18_ARATH (Fasciclin-like arabinogalactan protein 18 OS=Arabidopsis thaliana GN=FLA18 PE=2 SV=1) HSP 1 Score: 251.521 bits (641), Expect = 2.278e-73 Identity = 137/213 (64.32%), Postives = 163/213 (76.53%), Query Frame = 3 Query: 21 SFLLLMFIFPLQLTASMQLQGN-NATHSGQINSNSVLVALLDSHYTELSELVEKALLLQPLEDAVGKHSITIFAPKNEALERDLDPEFKRFLLEPGNLKSLQTLLLHHIVSTRIELNRTATEST---QHHTLSSDSVELTSH---DSGDKFISQSKVIHPNAVDRPDGVIHGIERLLIPRSVQQDFNNRRNLRSISAVRPEGAPEVDPRTNRL 638 S + + F F L AS G+ N T SGQINSNSVLVALLDS YTEL+ELVEKALLLQ LEDAVG+H+ITIFAP+NEALERDLDP+FKRFLL+PGNLKSLQTLLL HI+ R+ N+ E++ +H TL D V S +G + ++ + + P+ + RPDG+IHGIERLLIPRSVQ+DFN RRNLRSISAV PEGAPE+DPRTNRL Sbjct: 9 SVITIFFSFFFLLNASALESGHHNITGSGQINSNSVLVALLDSRYTELAELVEKALLLQTLEDAVGRHNITIFAPRNEALERDLDPDFKRFLLQPGNLKSLQTLLLSHIIPKRVGSNQWPEENSGRVKHVTLGHDQVLHLSKLKGTNGKRLVNSAVITRPDDLTRPDGLIHGIERLLIPRSVQEDFNRRRNLRSISAVLPEGAPEIDPRTNRL 221 HSP 2 Score: 46.595 bits (109), Expect = 2.278e-73 Identity = 20/32 (62.50%), Postives = 23/32 (71.88%), Query Frame = 2 Query: 740 GPGRPHHHFNGKKQLKEFIQTLLTYRGYNKWA 835 GPG H HFNG Q+K+FI TLL Y GYN+ A Sbjct: 257 GPGGAHKHFNGDAQVKDFIHTLLHYGGYNEMA 288
BLAST of DY304593 vs. ExPASy Swiss-Prot
Match: FLA16_ARATH (Fasciclin-like arabinogalactan protein 16 OS=Arabidopsis thaliana GN=FLA16 PE=2 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 5.037e-70 Identity = 133/205 (64.88%), Postives = 158/205 (77.07%), Query Frame = 3 Query: 24 FLLLMFIFPLQLTASMQLQGNNATHSGQINSNSVLVALLDSHYTELSELVEKALLLQPLEDAVGKHSITIFAPKNEALERDLDPEFKRFLLEPGNLKSLQTLLLHHIVSTRIELNRTATESTQHHTLSSDSVELTSHDSGDKFISQSKVIHPNAVDRPDGVIHGIERLLIPRSVQQDFNNRRNLRSISAVRPEGAPEVDPRTNRL 638 FLLL+F+ TA +N GQINSNSVLVALLDSHYTEL+ELVEKALLLQ LE+AVGKH+ITIFAP+N+ALER+LDP FK FLLEP NLKSLQ+LL+ HI+ RI + + S H TLS+D + LT D + +++I P+ V RPDG+IHGIERLLIPRSVQ+DFN RR+LRSISAV PEGAPEVDPRT+RL Sbjct: 10 FLLLLFLTTSIATALP----DNKPVPGQINSNSVLVALLDSHYTELAELVEKALLLQTLEEAVGKHNITIFAPRNDALERNLDPLFKSFLLEPRNLKSLQSLLMFHILPKRITSPQWPSLSHHHRTLSNDHLHLTV-DVNTLKVDSAEIIRPDDVIRPDGIIHGIERLLIPRSVQEDFNRRRSLRSISAVIPEGAPEVDPRTHRL 209 HSP 2 Score: 46.2098 bits (108), Expect = 5.037e-70 Identity = 20/32 (62.50%), Postives = 23/32 (71.88%), Query Frame = 2 Query: 740 GPGRPHHHFNGKKQLKEFIQTLLTYRGYNKWA 835 GPG P HFNG Q+K+FI TLL Y GYN+ A Sbjct: 243 GPGGPRGHFNGDAQVKDFIHTLLHYGGYNEMA 274
BLAST of DY304593 vs. ExPASy Swiss-Prot
Match: FLA15_ARATH (Fasciclin-like arabinogalactan protein 15 OS=Arabidopsis thaliana GN=FLA15 PE=2 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 8.567e-70 Identity = 124/203 (61.08%), Postives = 157/203 (77.34%), Query Frame = 3 Query: 30 LLMFIFPLQLTASMQLQGNNATHSGQINSNSVLVALLDSHYTELSELVEKALLLQPLEDAVGKHSITIFAPKNEALERDLDPEFKRFLLEPGNLKSLQTLLLHHIVSTRIELNRTATESTQHHTLSSDSVELTSHDSGDKFISQSKVIHPNAVDRPDGVIHGIERLLIPRSVQQDFNNRRNLRSISAVRPEGAPEVDPRTNRL 638 L +F L LT S+ + SGQINSNSVLVALLDSHYTEL+ELVEKALLLQ LE+AVG+H+ITIFAP+N+ALE++LDPEFK FLL+P NLKSLQ+LL+ HI+ RI + ++ H TLS+D + T+ ++ +++ P+ + RPDG+IHGIERLLIPRSVQ+DFN RR+LRSI+AV PEGAPEVDPRT+RL Sbjct: 4 LSKLLFFLLLTISITTALPDKPGSGQINSNSVLVALLDSHYTELAELVEKALLLQTLEEAVGQHNITIFAPRNDALEKNLDPEFKSFLLQPKNLKSLQSLLMFHILPKRITSPQFSSAVVSHRTLSNDHLHFTNGK-----VNSAEITKPDDLTRPDGIIHGIERLLIPRSVQEDFNRRRSLRSIAAVLPEGAPEVDPRTHRL 201 HSP 2 Score: 50.8322 bits (120), Expect = 8.567e-70 Identity = 21/32 (65.62%), Postives = 25/32 (78.12%), Query Frame = 2 Query: 740 GPGRPHHHFNGKKQLKEFIQTLLTYRGYNKWA 835 GPG P HHFNG+ Q+K+FI TLL Y GYN+ A Sbjct: 235 GPGGPRHHFNGEAQVKDFIHTLLHYGGYNEMA 266 The following BLAST results are available for this feature:
BLAST of DY304593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY304593 ID=DY304593; Name=DY304593; organism=Citrus clementina; type=EST; length=919bpback to top |