DY304602
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY304602 vs. ExPASy Swiss-Prot
Match: ATPG3_IPOBA (ATP synthase subunit gamma, mitochondrial OS=Ipomoea batatas GN=ATPC PE=1 SV=2) HSP 1 Score: 421.394 bits (1082), Expect = 3.720e-117 Identity = 219/274 (79.93%), Postives = 244/274 (89.05%), Query Frame = 2 Query: 113 MAMAALRREGRRFAT-PLISPCPIAAIRSPFLS--EEDAPLGVRSISTQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLVELDSYEIEGGETKGEIL*NLADFQFPCVMFNGVLEKGC 925 MAMAALRREGRR A P SP P+ A+RS +S EE GVRSISTQ+VRNRMKSVKNIQKITKAMKMVAASKLRAIQ +AENSRGLWQPFTALLGDTP+VD KKNVI+TISSDKGLCGGINST+VK S+++HKLNSGP+KENKYVILGEKAKA LVRDSKKDIELIITELQKNPLNYTQVSV+ADDILKNVEFDALRI+++KF SVVSF+PTM+TVLSPE+VERE+ESGGKL +LDSYEIEG E+K E+L NL +FQF V+FN VLE C Sbjct: 1 MAMAALRREGRRLAAAPFTSPTPLNALRSSLVSPSEEIGLSGVRSISTQVVRNRMKSVKNIQKITKAMKMVAASKLRAIQTRAENSRGLWQPFTALLGDTPSVDVKKNVIITISSDKGLCGGINSTSVKTSRNIHKLNSGPEKENKYVILGEKAKAQLVRDSKKDIELIITELQKNPLNYTQVSVVADDILKNVEFDALRIVFNKFQSVVSFVPTMSTVLSPEVVERESESGGKLGDLDSYEIEGAESKSEVLQNLTEFQFSSVLFNAVLENAC 274
BLAST of DY304602 vs. ExPASy Swiss-Prot
Match: ATPG3_ARATH (ATP synthase subunit gamma, mitochondrial OS=Arabidopsis thaliana GN=ATPC PE=1 SV=1) HSP 1 Score: 409.838 bits (1052), Expect = 1.120e-113 Identity = 209/272 (76.84%), Postives = 241/272 (88.60%), Query Frame = 2 Query: 113 MAMAALRREGRRFATPLISPCPIAAIRSPFLSE-EDAPLGVRSISTQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLVELDSYEIEGGETKGEIL*NLADFQFPCVMFNGVLEKGC 925 MAMA RREGRR P I+ PIAAIRSP S+ E+ LGVRSISTQ+VRNRMKSVKNIQKITKAMKMVAASKLRA+Q +AENSRGLWQPFTALLGD P++D KK+V+VT+SSDKGLCGGINST VK+S++L+KLN+GP+KE ++VI+GEKAKAI+ RDSK DI L +TEL KNPLNY QVSVLADDILKNVEFDALRI+Y+KFHSVV+FLPT++TVLSPE++E+E+E GGKL ELDSYEIEGGETKGEIL NLA+FQF CVMFN VLE C Sbjct: 1 MAMAVFRREGRRLL-PSIAARPIAAIRSPLSSDQEEGLLGVRSISTQVVRNRMKSVKNIQKITKAMKMVAASKLRAVQGRAENSRGLWQPFTALLGDNPSIDVKKSVVVTLSSDKGLCGGINSTVVKVSRALYKLNAGPEKEVQFVIVGEKAKAIMFRDSKNDIVLSVTELNKNPLNYAQVSVLADDILKNVEFDALRIVYNKFHSVVAFLPTVSTVLSPEIIEKESEIGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENAC 271
BLAST of DY304602 vs. ExPASy Swiss-Prot
Match: ATPG_ROSDO (ATP synthase gamma chain OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=atpG PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.006e-21 Identity = 76/250 (30.40%), Postives = 132/250 (52.80%), Query Frame = 2 Query: 242 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD---------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRD--SKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLVELDSYEIEGGETKGEIL-*NLADFQFPCVMFNGVLEKGCR 928 S + ++NR++SVK+ +KITKAM+MVAA+KLR Q AE SR + F A++ + T K +++ ++S++GLCGG N+ K++++ + G K+ K + +G+K + L RD S + +TE+++ ++Y +A D+L EFD I Y+KF +VVS +PT ++ + ++E E L + YE + ++L +A F ++ NG E+G R Sbjct: 3 SLKDLKNRIESVKSTRKITKAMQMVAAAKLRRAQEAAEQSRPYTERFNAVMAGLAASVGGSDSAPKLLSGTGSDKVQLLIVMTSERGLCGGFNTNIAKLARAHAQKLQGEGKDVKILTVGKKGRDQLKRDLGSLFIGHVDLTEIKR--VSYVDAQGIAKDVLNRFDVGEFDVATIFYAKFVNVVSQIPTAQQIIPAKFEQQEGEEASTLFD---YEPDEEAILADLLPRGVATQIFSALLENGASEQGAR 247
BLAST of DY304602 vs. ExPASy Swiss-Prot
Match: ATPG_BOVIN (ATP synthase subunit gamma, mitochondrial OS=Bos taurus GN=ATP5C1 PE=1 SV=3) HSP 1 Score: 98.2117 bits (243), Expect = 7.213e-20 Identity = 70/203 (34.48%), Postives = 115/203 (56.65%), Query Frame = 2 Query: 230 VRSIST-QIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALL--GDTPTV-DAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKN-VEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLVELDS 823 VR+++T + + R+KS+KNIQKITK+MKMVAA+K + + + +R AL D T D KK++I+ +SSD+GLCG I+S+ K KS + KE K + +G+K ++IL R + E+ + P + SV+A ++L + EFD II+++F SV+S+ + S + + AES ++D+ Sbjct: 22 VRNMATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVYGVGSLALYEKADIKTPEDKKKHLIIGVSSDRGLCGAIHSSVAKQMKSEAANLAAAGKEVKIIGVGDKIRSILHRTHSDQFLVTFKEVGRRPPTFGDASVIALELLNSGYEFDEGSIIFNRFRSVISYKTEEKPIFSLDTIS-SAESMSIYDDIDA 223
BLAST of DY304602 vs. ExPASy Swiss-Prot
Match: ATPG_DINSH (ATP synthase gamma chain OS=Dinoroseobacter shibae (strain DFL 12) GN=atpG PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.230e-19 Identity = 74/244 (30.33%), Postives = 128/244 (52.46%), Query Frame = 2 Query: 254 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALL-------GDTP--------TVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLVELDSYEIEGGETKGEIL-*NLADFQFPCVMFNGVLEKGCR 928 ++NR++SVK+ +KITKAM+MVAA+KLR Q AE SR + F A+L GD+ T + +++V +++++GLCGG NS+ K++++ + K K + +G+K + L RD K + + ++Y + +A D+L EFD I +++F SV+S +PT ++ P E +A++ L + YE ++L +A F ++ NG E+G R Sbjct: 7 LKNRIESVKSTRKITKAMQMVAAAKLRRAQDAAEASRPYTERFNAVLAGLAASVGDSDSGPRLLVGTGSDQTHLLVVMTAERGLCGGFNSSIAKLARAHAEKLVAQGKTVKILTVGKKGREQLKRDLSKHFIGHVDLSEVKRVSYDNAADIAADVLGRFDAGEFDVATIFFNRFQSVISQIPTAQQII-PASFEGDADADATLYD---YEPSEEAILADLLPRGVATQIFAALLENGASEQGAR 246
BLAST of DY304602 vs. ExPASy Swiss-Prot
Match: ATPG_METNO (ATP synthase gamma chain OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=atpG PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 2.099e-19 Identity = 74/248 (29.84%), Postives = 122/248 (49.19%), Query Frame = 2 Query: 242 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLG----------DTPTVDA-----KKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLVELDSYEIEGGETKGEIL-*NLADFQFPCVMFNGVLEKGCR 928 S + +RNR+ SVK QKITKAM+MVAA+KLR Q AEN+R + A+LG +TP + A + +++V ++++GLCG NS+ ++++ + K K + +G+K IL R+ + I +I L + + +++L EFD + YS+F SV++ +PT ++ E+ A + YE E GE +L NL ++ N E+G R Sbjct: 3 SLKDLRNRIASVKATQKITKAMQMVAAAKLRRAQNAAENARPYAERMAAVLGNLATNLTPGAETPRLLAGTGADRVHLLVVCTAERGLCGAFNSSIARLARDHARRLVAEGKTVKIICVGKKGYDILRREFRDQIVELIELRGVRQLGFENAEAVTENLLNRFEAGEFDIATLFYSRFRSVIAQVPTAQQIIPAEI--SPASESAQTDAAYEYEPEEGEILAALLPKNLTVQILRALLENAASEQGAR 248
BLAST of DY304602 vs. ExPASy Swiss-Prot
Match: ATPG_PELUB (ATP synthase gamma chain OS=Pelagibacter ubique GN=atpG PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.741e-19 Identity = 74/239 (30.96%), Postives = 114/239 (47.70%), Query Frame = 2 Query: 254 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD---------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLVELDSYEIEGGETKGEIL*NLADFQFPCVMFNGVLE 916 ++ R+ SVK+ QKITKAMKMVAA+KLR Q AE R + ++ + + T + K ++ + ++SD+GLCGG N+ +K +K+ + S K K + +G K L R K I I+ +NY + I++N EFD I Y+KF +V++ +P ++ + E E S D+YE E E EIL NL +F +LE Sbjct: 7 LKKRIASVKSTQKITKAMKMVAAAKLRRAQENAEKGRPYSEKMNNIILNLSSGISDKENAPKLLSGTGEDKVHLCIVLTSDRGLCGGFNTNIIKKAKTYFQKISDEGKTLKIITVGSKGYDQLKRVYKDAIVERISFKDSKTINYLDAEKVGKMIIENFEKEEFDVCTIFYNKFKNVITQIPQEQQIIPLKTSEAEENSSE-----DNYEFEPDE--DEILSNLLPKNISTQIFKAMLE 238
BLAST of DY304602 vs. ExPASy Swiss-Prot
Match: ATPG_METS4 (ATP synthase gamma chain OS=Methylobacterium sp. (strain 4-46) GN=atpG PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 6.106e-19 Identity = 69/226 (30.53%), Postives = 117/226 (51.77%), Query Frame = 2 Query: 242 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD-----TPTVDAKK----------NVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLVELD-SYEIEGGETKGEIL 862 S + +RNR+ SVK QKITKAM+MVAA+KLR Q AEN+R + A+LG+ TP + + ++++ ++++GLCG NS+ ++++ + + + K + +G+K IL R+ + I +I L + +A ++L EFD + YS+F SV+ +PT + +++ E G+ + D +YE E E GEIL Sbjct: 3 SLKDLRNRIASVKATQKITKAMQMVAAAKLRRAQNAAENARPYAERMAAVLGNLATNLTPGAETPRLLSGTGADRVHLLLVCTAERGLCGAFNSSIARLARDHARRLTAEGRTVKIICVGKKGYDILRREFRDQIVELIELRGVRQLGFDNAETIAQNLLGRFEAGEFDIATLFYSRFRSVIVQIPT-----AQQIIPAEIPPAGEAAQTDAAYEYEPDE--GEIL 221
BLAST of DY304602 vs. ExPASy Swiss-Prot
Match: ATPG_METEP (ATP synthase gamma chain OS=Methylobacterium extorquens (strain PA1) GN=atpG PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 6.106e-19 Identity = 78/250 (31.20%), Postives = 117/250 (46.80%), Query Frame = 2 Query: 242 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD---------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLVELDSYEIE-GGETKGEIL--*NLADFQFPCVMFNGVLEKGCR 928 S + +RNR+ SVK QKITKAM+MVAA+KLR Q AEN R + +LG+ T T + +++V + D+GL G NS+ ++++ K K + +G+K +L R + I P++Y + +ADDIL EFD + YS+F SV+S +PT ++ EL E + + E E ET E L NL F ++ N E+G R Sbjct: 3 SLKDLRNRITSVKATQKITKAMQMVAAAKLRRAQNAAENGRPYAERMAQVLGNLAGNLIGGVGAPRLLTGTGQDRVHLLVVCTGDRGLAGAFNSSIARLARDHANRLMADGKTVKIITIGKKGLDVLRRQFRDQIIASRDIRGNKPVDYPFAAEIADDILARFEAGEFDVATLFYSEFRSVISQIPTAQKLIPAELPTAEGAAATGAGSDAAMEFEPNEETILETLLPKNLTVQIFRALLENAASEQGAR 252
BLAST of DY304602 vs. ExPASy Swiss-Prot
Match: ATPG_HUMAN (ATP synthase subunit gamma, mitochondrial OS=Homo sapiens GN=ATP5C1 PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 6.106e-19 Identity = 63/175 (36.00%), Postives = 100/175 (57.14%), Query Frame = 2 Query: 230 VRSIST-QIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTV---DAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKN-VEFDALRIIYSKFHSVVSF 739 VR+++T + + R+KS+KNIQKITK+MKMVAA+K + + + +R AL D KK++++ +SSD+GLCG I+S+ K KS + KE V +G+K + IL R + E+ + P + SV+A ++L + EFD II++KF SV+S+ Sbjct: 22 VRNMATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARIYGLGSLALYEKADIKGPEDKKKHLLIGVSSDRGLCGAIHSSIAKQMKSEVATLTAAGKEVMLVGIGDKIRGILYRTHSDQFLVAFKEVGRKPPTFGDASVIALELLNSGYEFDEGSIIFNKFRSVISY 196 The following BLAST results are available for this feature:
BLAST of DY304602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 190
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Sequences
The
following sequences are available for this feature:
EST sequence >DY304602 ID=DY304602; Name=DY304602; organism=Citrus clementina; type=EST; length=944bpback to top |