DY304605
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY304605 vs. ExPASy Swiss-Prot
Match: FCL1_ORYSJ (Probable GDP-L-fucose synthase 1 OS=Oryza sativa subsp. japonica GN=Os06g0652400 PE=2 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 8.445e-100 Identity = 94/116 (81.03%), Postives = 106/116 (91.38%), Query Frame = 3 Query: 450 YPKFAPQPIPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGRPLREFLPLEDLAEAVVFQRD 797 YPKFAPQPIPEN+LL+GPLEPTNEWYA+AKIAGIKMCQAY+IQ+ F+AIS MPTNLYGP DNFHPENSHVLPAL+RRFHEAK + A EVVVWGTG PLREFL ++DLA+AV+F D Sbjct: 127 YPKFAPQPIPENSLLSGPLEPTNEWYAVAKIAGIKMCQAYRIQHGFDAISAMPTNLYGPQDNFHPENSHVLPALIRRFHEAKASNAAEVVVWGTGSPLREFLHVDDLADAVIFLMD 242 HSP 2 Score: 180.644 bits (457), Expect = 8.445e-100 Identity = 89/117 (76.07%), Postives = 107/117 (91.45%), Query Frame = 1 Query: 109 SFLSEKSAKIFVAGHRGLVGSAIVRKLLSLGFTNLLLRTHAELDLTRQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYG-VKKLLFLGSSCITP 456 SFL++K K+FVAGHRGLVGSAI+R L+SLGFTN+++RTHAELDLTRQSDVE+FFAAE P YV++AAAKVGGIHAN+T+PA+FIA NLQIQTNV+D+A + G V+KLLFLGSSCI P Sbjct: 12 SFLADKGGKVFVAGHRGLVGSAILRHLVSLGFTNVVVRTHAELDLTRQSDVEAFFAAELPRYVVLAAAKVGGIHANSTFPADFIAANLQIQTNVVDAALKCGSVRKLLFLGSSCIYP 128
BLAST of DY304605 vs. ExPASy Swiss-Prot
Match: Y4AF_RHISN (Uncharacterized protein y4aF OS=Rhizobium sp. (strain NGR234) GN=NGR_a00420 PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.223e-66 Identity = 73/113 (64.60%), Postives = 88/113 (77.88%), Query Frame = 3 Query: 450 YPKFAPQPIPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGRPLREFLPLEDLAEAVVF 788 YPK+A QPI E ALLTGPLEPTNEWYAIAKIAGIK+CQAY+ QY N IS MPTNLYGP D F +SHV+PAL+R+ HEAK+ + +WG+G P R+FL ED ++A+VF Sbjct: 115 YPKYAAQPIREEALLTGPLEPTNEWYAIAKIAGIKLCQAYRKQYGANFISAMPTNLYGPRDKFDLNSSHVVPALIRKAHEAKIKDLGCLSIWGSGTPTRDFLYSEDCSDALVF 227 HSP 2 Score: 119.013 bits (297), Expect = 3.223e-66 Identity = 63/108 (58.33%), Postives = 81/108 (75.00%), Query Frame = 1 Query: 133 KIFVAGHRGLVGSAIVRKLLSLGFTNLLLRTHAELDLTRQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGSSCITP 456 +I+VAGH+G+VGSAI+R L S +++ +LDLTRQ +VE F EKP VI+AAAKVGGI AN+T PA+FI NL ++ NVI+ +FR GV+KLLFLGSSCI P Sbjct: 10 RIWVAGHKGMVGSAIIRSLASED-CEVIVADRQKLDLTRQEEVEKFLLKEKPHAVIMAAAKVGGILANDTMPADFIYQNLIMEANVIEGSFRSGVEKLLFLGSSCIYP 116
BLAST of DY304605 vs. ExPASy Swiss-Prot
Match: FCL_ECOLI (GDP-L-fucose synthetase OS=Escherichia coli (strain K12) GN=fcl PE=1 SV=2) HSP 1 Score: 154.066 bits (388), Expect = 2.066e-65 Identity = 72/112 (64.29%), Postives = 88/112 (78.57%), Query Frame = 3 Query: 450 YPKFAPQPIPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGRPLREFLPLEDLAEAVV 785 YPK A QP+ E+ LL G LEPTNE YAIAKIAGIK+C++Y QY + S MPTNLYGP+DNFHP NSHV+PAL+RRFHEA A +VVVWG+G P+REFL ++D+A A + Sbjct: 111 YPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQNAPDVVVWGSGTPMREFLHVDDMAAASI 222 HSP 2 Score: 117.472 bits (293), Expect = 2.066e-65 Identity = 61/108 (56.48%), Postives = 78/108 (72.22%), Query Frame = 1 Query: 133 KIFVAGHRGLVGSAIVRKLLSLGFTNLLLRTHAELDLTRQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGSSCITP 456 ++F+AGHRG+VGSAI R+L G L+LRT EL+L V FFA+E+ V +AAAKVGGI ANNTYPA+FI N+ I++N+I +A + V KLLFLGSSCI P Sbjct: 5 RVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYP 112
BLAST of DY304605 vs. ExPASy Swiss-Prot
Match: FCL1_ARATH (GDP-L-fucose synthase 1 OS=Arabidopsis thaliana GN=GER1 PE=1 SV=2) HSP 1 Score: 207.994 bits (528), Expect = 6.030e-53 Identity = 98/116 (84.48%), Postives = 107/116 (92.24%), Query Frame = 3 Query: 450 YPKFAPQPIPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGRPLREFLPLEDLAEAVVFQRD 797 YPKFAPQPIPE+ALLT LEPTNEWYAIAKIAGIK CQAY+IQ+ ++AISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGA+EVVVWGTG PLREFL ++DLA+A VF D Sbjct: 113 YPKFAPQPIPESALLTASLEPTNEWYAIAKIAGIKTCQAYRIQHGWDAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAEEVVVWGTGSPLREFLHVDDLADACVFLLD 228 HSP 2 Score: 190.274 bits (482), Expect = 1.308e-47 Identity = 95/124 (76.61%), Postives = 108/124 (87.10%), Query Frame = 1 Query: 115 LSEKSAKIFVAGHRGLVGSAIVRKLLSLGFTNLLLRTHAELDLTRQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGSSCITPNSPRSQSPKT 486 +S+KSAKIFVAGHRGLVGSAIVRKL GFTNL+L+THAELDLTRQ+DVESFF+ EKP YVI+AAAKVGGIHANNTYPA+FI +NLQIQTNVI SA+ +GVKKLLFLGSSCI P P++ Sbjct: 1 MSDKSAKIFVAGHRGLVGSAIVRKLQEQGFTNLVLKTHAELDLTRQADVESFFSQEKPVYVILAAAKVGGIHANNTYPADFIGVNLQIQTNVIHSAYEHGVKKLLFLGSSCIYPKFAPQPIPES 124
BLAST of DY304605 vs. ExPASy Swiss-Prot
Match: FCL2_ARATH (Putative GDP-L-fucose synthase 2 OS=Arabidopsis thaliana GN=GER2 PE=2 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 1.028e-52 Identity = 96/116 (82.76%), Postives = 107/116 (92.24%), Query Frame = 3 Query: 450 YPKFAPQPIPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGRPLREFLPLEDLAEAVVFQRD 797 YPKFAPQPIPE+ALLTGPLEPTNEWYAIAKIAGIKMCQAY++Q++++AISGMPTNLYG NDNFHPENSHVLPALMRRFHEAK N A EVVVWG+G PLREFL ++DLA+A VF D Sbjct: 127 YPKFAPQPIPESALLTGPLEPTNEWYAIAKIAGIKMCQAYRLQHQWDAISGMPTNLYGQNDNFHPENSHVLPALMRRFHEAKANNADEVVVWGSGSPLREFLHVDDLADACVFLMD 242 HSP 2 Score: 194.126 bits (492), Expect = 9.059e-49 Identity = 100/132 (75.76%), Postives = 110/132 (83.33%), Query Frame = 1 Query: 91 SNKDSCSFLSEKSAKIFVAGHRGLVGSAIVRKLLSLGFTNLLLRTHAELDLTRQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGSSCITPNSPRSQSPKT 486 S S SF+ EKSAKIFVAGHRGLVGSAIVRKL GFTNL+LRTH+ELDLT QSDVESFFA EKP YVI+AAAKVGGIHANNTYPA+FI +NLQIQTNVI SA+ +GVKKLLFLGSSCI P P++ Sbjct: 7 SEMKSGSFMLEKSAKIFVAGHRGLVGSAIVRKLQDQGFTNLVLRTHSELDLTSQSDVESFFATEKPVYVILAAAKVGGIHANNTYPADFIGVNLQIQTNVIHSAYTHGVKKLLFLGSSCIYPKFAPQPIPES 138
BLAST of DY304605 vs. ExPASy Swiss-Prot
Match: FCL2_ORYSJ (Putative GDP-L-fucose synthase 2 OS=Oryza sativa subsp. japonica GN=Os06g0652300 PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.772e-36 Identity = 88/191 (46.07%), Postives = 121/191 (63.35%), Query Frame = 1 Query: 85 GDSNKDSCSFLSEKSAKIFVAGHRGLVGSAIVRKLLSLGFTNLLLRTHAELDLTRQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYG-VKKLLFLGSSCITPNSPRSQSPKTPC*RAPWSRRMNGTL*PK*LGLRCARLIRFSINSMQFLGCPRIYMAPMIISTPKTP 654 GD + + SFL +KSAK+F+AGHRG+VGSA+ RKL +LGFTN+++RT AELDL Q+ VE+FFAAE P YVI+AAAKVGG+HA++ PAE++ NL+I NV+D+A R G V+KLL L SS I P +P++ P + PK G++ + +R G I AP + P+ P Sbjct: 20 GDGDAAAVSFLGDKSAKVFIAGHRGMVGSAVHRKLDALGFTNVVVRTRAELDLACQAAVEAFFAAELPRYVILAAAKVGGVHASSAAPAEYLTENLRITVNVVDAARRCGSVRKLLVLASSTIYPADAPQPTPESALLTGPPAEGSEWYAIPKIAGIKMCQAVRAE------YGLDAIAAAPNNLYGPRHP 204 HSP 2 Score: 148.288 bits (373), Expect = 5.670e-35 Identity = 71/112 (63.39%), Postives = 84/112 (75.00%), Query Frame = 3 Query: 450 YPKFAPQPIPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGRPLREFLPLEDLAEAVV 785 YP APQP PE+ALLTGP +EWYAI KIAGIKMCQA + +Y +AI+ P NLYGP F PE+SHV+PAL+RRFH AK+ GA EV VWG+G REF ++DLAEAVV Sbjct: 143 YPADAPQPTPESALLTGPPAEGSEWYAIPKIAGIKMCQAVRAEYGLDAIAAAPNNLYGPRHPFPPEHSHVIPALIRRFHRAKLEGAGEVAVWGSGAAAREFTHVDDLAEAVV 254
BLAST of DY304605 vs. ExPASy Swiss-Prot
Match: FCL_DICDI (GDP-L-fucose synthetase OS=Dictyostelium discoideum GN=ger PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 5.276e-27 Identity = 43/113 (38.05%), Postives = 67/113 (59.29%), Query Frame = 3 Query: 450 YPKFAPQPIPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGRPLREFLPLEDLAEAVVF 788 +P PI E + GP P+NE YA AK + +AY +Y S +PTN+YGP+DN+H + HV+P L+ + + A N +++ + GTG+PLR+F+ DLA+ V+ Sbjct: 117 FPDKTTYPIDETMIHNGPPHPSNEGYAYAKRMIDVLNRAYNEEYGCKFTSVIPTNIYGPHDNYHLTDGHVIPGLIHKTYLAMKNN-QDLTIMGTGKPLRQFIYSYDLAKYFVW 228 HSP 2 Score: 59.6918 bits (143), Expect = 5.276e-27 Identity = 38/120 (31.67%), Postives = 64/120 (53.33%), Query Frame = 1 Query: 115 LSEKSAK--IFVAGHRGLVGSAIVRKLLSLGFTN---LLLRTHAELDLTRQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGSSCITPN 459 ++E ++K + V G GLVG I + + +N + +R+ ++ DL + S+F KP++VI AA+VGG+ +N Y EF N+ I NV+ + V K + S+CI P+ Sbjct: 1 MTETTSKRTVLVTGGSGLVGKGIEKYVKETDKSNDVWVFMRS-SDCDLKSRESTRSYFEKIKPTHVIHLAARVGGLFSNMKYKVEFFRENIDINDNVLACCKEFNVVKCVSCLSTCIFPD 119
BLAST of DY304605 vs. ExPASy Swiss-Prot
Match: FCL_CRIGR (GDP-L-fucose synthetase OS=Cricetulus griseus GN=TSTA3 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 8.939e-27 Identity = 43/113 (38.05%), Postives = 65/113 (57.52%), Query Frame = 3 Query: 450 YPKFAPQPIPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGRPLREFLPLEDLAEAVVF 788 +P PI E + GP +N Y+ AK +AY Q+ + +PTN++GP+DNF+ E+ HVLP L+ + H AK NG+ + VWGTG+P R+F+ DLA ++ Sbjct: 118 FPDKTTYPIDETMIHNGPPHSSNFGYSYAKRMIDVQNRAYFQQHGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSNGS-ALTVWGTGKPRRQFIYSLDLARLFIW 229 HSP 2 Score: 62.3882 bits (150), Expect = 8.939e-27 Identity = 39/114 (34.21%), Postives = 60/114 (52.63%), Query Frame = 1 Query: 127 SAKIFVAGHRGLVGSAIVRKLLS---LGFTNLLLRTHAELDLTRQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGSSCITPN 459 S +I V G GLVG AI + + L + + + DLT + ++ F +P++VI AA VGG+ N Y +F N+ I NV+ SAF G +K++ S+CI P+ Sbjct: 7 SRRILVTGGSGLVGRAIQKVVADGAGLPGEEWVFVSSKDADLTDAAQTQALFQKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHINDNVLHSAFEVGTRKVVSCLSTCIFPD 120
BLAST of DY304605 vs. ExPASy Swiss-Prot
Match: FCL_HUMAN (GDP-L-fucose synthetase OS=Homo sapiens GN=TSTA3 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.566e-26 Identity = 43/113 (38.05%), Postives = 65/113 (57.52%), Query Frame = 3 Query: 450 YPKFAPQPIPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGRPLREFLPLEDLAEAVVF 788 +P PI E + GP +N Y+ AK +AY QY + +PTN++GP+DNF+ E+ HVLP L+ + H AK +G+ + VWGTG P R+F+ DLA+ ++ Sbjct: 118 FPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGS-ALTVWGTGNPRRQFIYSLDLAQLFIW 229 HSP 2 Score: 61.2326 bits (147), Expect = 2.566e-26 Identity = 38/114 (33.33%), Postives = 60/114 (52.63%), Query Frame = 1 Query: 127 SAKIFVAGHRGLVGSAIVRKLLS---LGFTNLLLRTHAELDLTRQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGSSCITPN 459 S +I V G GLVG AI + + L + + + + DLT + + F +P++VI AA VGG+ N Y +F N+ + NV+ SAF G +K++ S+CI P+ Sbjct: 7 SMRILVTGGSGLVGKAIQKVVADGAGLPGEDWVFVSSKDADLTDTAQTRALFEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPD 120
BLAST of DY304605 vs. ExPASy Swiss-Prot
Match: FCL_PONAB (GDP-L-fucose synthetase OS=Pongo abelii GN=TSTA3 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 5.659e-26 Identity = 42/113 (37.17%), Postives = 65/113 (57.52%), Query Frame = 3 Query: 450 YPKFAPQPIPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGRPLREFLPLEDLAEAVVF 788 +P PI E + GP +N Y+ K +AY QY + +PTN++GP+DNF+ E+ HVLP L+ + H AK +G+ + VWGTG+P R+F+ DLA+ ++ Sbjct: 118 FPDKTTYPIDETMIHNGPPHSSNFGYSYVKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGS-ALTVWGTGKPRRQFIYSLDLAQLFIW 229 HSP 2 Score: 60.4622 bits (145), Expect = 5.659e-26 Identity = 38/114 (33.33%), Postives = 59/114 (51.75%), Query Frame = 1 Query: 127 SAKIFVAGHRGLVGSAIVRKLLS---LGFTNLLLRTHAELDLTRQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGSSCITPN 459 S +I V G GLVG AI + + L + + + + DLT + + +P++VI AA VGG+ N Y +F N+ I NV+ SAF G +K++ S+CI P+ Sbjct: 7 SMRILVTGGSGLVGKAIQKVVADGAGLPGEDWVFVSSKDADLTDAAQTRALLEKVRPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHINDNVLHSAFEVGARKVVSCLSTCIFPD 120 The following BLAST results are available for this feature:
BLAST of DY304605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >DY304605 ID=DY304605; Name=DY304605; organism=Citrus clementina; type=EST; length=901bpback to top |