DY304608

Overview
NameDY304608
Unique NameDY304608
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length915
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY304608 vs. ExPASy Swiss-Prot
Match: CDC2_CHERU (Cell division control protein 2 homolog OS=Chenopodium rubrum GN=CDC2 PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.255e-53
Identity = 109/132 (82.58%), Postives = 116/132 (87.88%), Query Frame = 1
Query:  253 MDHYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVLHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPPLIKTFLYQILRW--HCLLPFLHRVHRREFE 642
            MD YEKVEKIGEGTYGVVYKAR+ VTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDV+HSEK+LYLVFEYLDLDLKKHMDSCPDFA DP +IK FLYQILR   +C     HRV  R+ +
Sbjct:    1 MDQYEKVEKIGEGTYGVVYKARDKVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSCPDFAKDPRMIKRFLYQILRGIAYC---HSHRVLHRDLK 129          
BLAST of DY304608 vs. ExPASy Swiss-Prot
Match: CDC2A_ANTMA (Cell division control protein 2 homolog A OS=Antirrhinum majus GN=CDC2A PE=2 SV=2)

HSP 1 Score: 206.453 bits (524), Expect = 1.812e-52
Identity = 106/132 (80.30%), Postives = 116/132 (87.88%), Query Frame = 1
Query:  253 MDHYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVLHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPPLIKTFLYQILRW--HCLLPFLHRVHRREFE 642
            M+ YEKVEKIGEGTYGVVYKAR+ VTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDV+HSEK+LYLVFEYLDLDLKKHMDSCP+F+ DP L+K FLYQILR   +C     HRV  R+ +
Sbjct:    1 MEQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSCPEFSQDPRLVKMFLYQILRGIAYC---HSHRVLHRDLK 129          
BLAST of DY304608 vs. ExPASy Swiss-Prot
Match: CDKA1_ARATH (Cyclin-dependent kinase A-1 OS=Arabidopsis thaliana GN=CDKA-1 PE=1 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.893e-50
Identity = 104/132 (78.79%), Postives = 114/132 (86.36%), Query Frame = 1
Query:  253 MDHYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVLHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPPLIKTFLYQILRW--HCLLPFLHRVHRREFE 642
            MD YEKVEKIGEGTYGVVYKAR+ VTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH NIV+LQDV+HSEK+LYLVFEYLDLDLKKHMDS PDF+ D  +IKT+LYQILR   +C     HRV  R+ +
Sbjct:    1 MDQYEKVEKIGEGTYGVVYKARDKVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHSNIVKLQDVVHSEKRLYLVFEYLDLDLKKHMDSTPDFSKDLHMIKTYLYQILRGIAYC---HSHRVLHRDLK 129          
BLAST of DY304608 vs. ExPASy Swiss-Prot
Match: CDC2_VIGAC (Cell division control protein 2 homolog OS=Vigna aconitifolia GN=CDC2 PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 3.198e-49
Identity = 102/132 (77.27%), Postives = 112/132 (84.85%), Query Frame = 1
Query:  253 MDHYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVLHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPPLIKTFLYQILRWHCLLPFL--HRVHRREFE 642
            M+ YEKVEKIGEGTYGVVYKAR+ VTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH NIVRLQDV+HSEK+LYLVFEYLDLDLKKHMDS P+F  DP  +K FLYQIL   C + +   HRV  R+ +
Sbjct:    1 MEQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHRNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPEFVKDPRQVKMFLYQIL---CGIAYCHSHRVLHRDLK 129          
BLAST of DY304608 vs. ExPASy Swiss-Prot
Match: CDKA1_ORYSJ (Cyclin-dependent kinase A-1 OS=Oryza sativa subsp. japonica GN=CDKA-1 PE=1 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 5.455e-49
Identity = 100/132 (75.76%), Postives = 113/132 (85.61%), Query Frame = 1
Query:  253 MDHYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVLHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPPLIKTFLYQILRW--HCLLPFLHRVHRREFE 642
            M+ YEK EKIGEGTYGVVY+AR+ VTNETIALKKIRLEQEDEGVPSTAIREISLLKEM HGNIVRL DV+HSEK++YLVFEYLDLDLKK MDSCP+FA +P LIK++LYQILR   +C     HRV  R+ +
Sbjct:    1 MEQYEKEEKIGEGTYGVVYRARDKVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMHHGNIVRLHDVIHSEKRIYLVFEYLDLDLKKFMDSCPEFAKNPTLIKSYLYQILRGVAYC---HSHRVLHRDLK 129          
BLAST of DY304608 vs. ExPASy Swiss-Prot
Match: CDC2_VIGUN (Cell division control protein 2 homolog OS=Vigna unguiculata GN=CDC2 PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 1.215e-48
Identity = 101/132 (76.52%), Postives = 112/132 (84.85%), Query Frame = 1
Query:  253 MDHYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVLHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPPLIKTFLYQILRWHCLLPFL--HRVHRREFE 642
            M+ YEKVEKIGEGTYGVVYKAR+ VT+ETIALKKIRLEQEDEGVPSTAIREISLLKEMQH NIVRLQDV+HSEK+LYLVFEYLDLDLKKHMDS P+F  DP  +K FLYQIL   C + +   HRV  R+ +
Sbjct:    1 MEQYEKVEKIGEGTYGVVYKARDRVTDETIALKKIRLEQEDEGVPSTAIREISLLKEMQHRNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPEFVKDPRQVKMFLYQIL---CGIAYCHSHRVLHRDLK 129          
BLAST of DY304608 vs. ExPASy Swiss-Prot
Match: CDC2_MAIZE (Cell division control protein 2 homolog OS=Zea mays GN=CDC2 PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 4.618e-48
Identity = 99/132 (75.00%), Postives = 111/132 (84.09%), Query Frame = 1
Query:  253 MDHYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVLHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPPLIKTFLYQILRW--HCLLPFLHRVHRREFE 642
            M+ YEKVEKIGEGTYGVVYKA +  TNETIALKKIRLEQEDEGVPSTAIREISLLKEM HGNIVRL DV+HSEK++YLVFEYLDLDLKK MDSCP+FA +P LIK++LYQIL    +C     HRV  R+ +
Sbjct:    1 MEQYEKVEKIGEGTYGVVYKALDKATNETIALKKIRLEQEDEGVPSTAIREISLLKEMNHGNIVRLHDVVHSEKRIYLVFEYLDLDLKKFMDSCPEFAKNPTLIKSYLYQILHGVAYC---HSHRVLHRDLK 129          
BLAST of DY304608 vs. ExPASy Swiss-Prot
Match: CDC22_MEDSA (Cell division control protein 2 homolog 2 OS=Medicago sativa GN=CDC2B PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 2.292e-47
Identity = 101/132 (76.52%), Postives = 110/132 (83.33%), Query Frame = 1
Query:  253 MDHYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVLHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPPLIKTFLYQILRWHCLLPFL--HRVHRREFE 642
            M+ YEKVEKIGEGTYGVVYKAR+  TNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH NIVRLQDV+HSEK+LYLVFEYLDLDLKK MDS P+FA D   IK FLYQIL   C + +   HRV  R+ +
Sbjct:    1 MEQYEKVEKIGEGTYGVVYKARDRATNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHRNIVRLQDVVHSEKRLYLVFEYLDLDLKKFMDSSPEFAKDQRQIKMFLYQIL---CGIAYCHSHRVLHRDLK 129          
BLAST of DY304608 vs. ExPASy Swiss-Prot
Match: CDC21_MEDSA (Cell division control protein 2 homolog 1 (Fragment) OS=Medicago sativa GN=CDC2A PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 3.310e-46
Identity = 97/128 (75.78%), Postives = 108/128 (84.38%), Query Frame = 1
Query:  265 EKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVLHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPPLIKTFLYQILRWHCLLPFL--HRVHRREFE 642
            E VEKIGEGTYGVVYKAR+ VTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH NIVRLQDV+HS+K+LYLVFEYLDLDLKKHMDS P+F  DP  +K FLYQ+L   C + +   HRV  R+ +
Sbjct:    2 ENVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHRNIVRLQDVVHSDKRLYLVFEYLDLDLKKHMDSSPEFIKDPRQVKMFLYQML---CGIAYCHSHRVLHRDLK 126          
BLAST of DY304608 vs. ExPASy Swiss-Prot
Match: CDKA2_ORYSJ (Cyclin-dependent kinase A-2 OS=Oryza sativa subsp. japonica GN=CDKA-2 PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 2.145e-45
Identity = 98/132 (74.24%), Postives = 109/132 (82.58%), Query Frame = 1
Query:  253 MDHYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVLHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPPLIKTFLYQILRW--HCLLPFLHRVHRREFE 642
            M+ YEKVEKIGEGTYGVVYK ++  TNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH NIVRLQDV+H EK +YLVFEYLDLDLKKHMDS PDF N   ++K+FLYQILR   +C     HRV  R+ +
Sbjct:    1 MEQYEKVEKIGEGTYGVVYKGKHRHTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHRNIVRLQDVVHKEKCIYLVFEYLDLDLKKHMDSSPDFKNH-RIVKSFLYQILRGIAYC---HSHRVLHRDLK 128          
The following BLAST results are available for this feature:
BLAST of DY304608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 222
Match NameE-valueIdentityDescription
CDC2_CHERU1.255e-5382.58Cell division control protein 2 homolog OS=Chenopo... [more]
CDC2A_ANTMA1.812e-5280.30Cell division control protein 2 homolog A OS=Antir... [more]
CDKA1_ARATH2.893e-5078.79Cyclin-dependent kinase A-1 OS=Arabidopsis thalian... [more]
CDC2_VIGAC3.198e-4977.27Cell division control protein 2 homolog OS=Vigna a... [more]
CDKA1_ORYSJ5.455e-4975.76Cyclin-dependent kinase A-1 OS=Oryza sativa subsp.... [more]
CDC2_VIGUN1.215e-4876.52Cell division control protein 2 homolog OS=Vigna u... [more]
CDC2_MAIZE4.618e-4875.00Cell division control protein 2 homolog OS=Zea may... [more]
CDC22_MEDSA2.292e-4776.52Cell division control protein 2 homolog 2 OS=Medic... [more]
CDC21_MEDSA3.310e-4675.78Cell division control protein 2 homolog 1 (Fragmen... [more]
CDKA2_ORYSJ2.145e-4574.24Cyclin-dependent kinase A-2 OS=Oryza sativa subsp.... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAQ9YC24RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304608 ID=DY304608; Name=DY304608; organism=Citrus clementina; type=EST; length=915bp
ATAAACCTTACTTCTTCCACCGCCGCCGCTGACTCCAATCACCTCACTTT
TACTCCGGCGATCTCCCCCGTCGGCTTGGATCGTCCTCGCGTCTGTTACT
GTATTATGCCTTTGTATTTTTCTCTTTCGTAAGCGGTTAATTTTCTCTTC
ATAACACACTGCCGCCACCTACGCCGTCGATTCGTGCCGTTCTTGTCGCC
GTCCGTCGGTAGCAAGGACGCCTCGTTCGTGTAGCTGTTACATTAAGACT
GAATGGACCACTATGAAAAGGTTGAGAAGATTGGTGAAGGAACCTATGGA
GTAGTTTACAAGGCCCGTAATTGTGTCACGAATGAGACAATAGCATTGAA
GAAGATCCGCCTTGAGCAGGAAGATGAAGGTGTGCCTAGCACCGCAATTA
GAGAAATTTCCCTCTTGAAAGAAATGCAGCATGGGAACATTGTTAGGTTG
CAAGATGTACTGCATAGCGAGAAGAAACTTTATCTGGTTTTCGAGTATTT
GGACTTGGATTTGAAGAAGCACATGGATTCTTGCCCAGATTTTGCTAATG
ATCCTCCTCTGATAAAAACATTCCTTTATCAAATTCTACGTTGGCATTGC
CTACTGCCATTTCTCCACCGGGTTCATCGTCGAGAATTTGAAACCCCCAA
AATTTGCTAAATAAATTCGTCACTACGACATGCCCTAATGTCTAGTAGAT
TTTTGGATTGGGACAGGGGTTTTTGAGGAATTCCTGGTACGGAAATTTAA
CAACTTGAAGGCTGGTTTATTTTGTGGGCAAGAAAGCCGACTGAAACAAA
TTACCCAGGTACATTCCGTACATTAATTTACATCTTCAGCTGCAGTGTTT
GAGCCCAGGAGGGCAACGTTCCTCTGGCCCGAAATGCGGCGACTCTCCGG
CCGTGCTTGCTGTTC
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