DY304610

Overview
NameDY304610
Unique NameDY304610
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length892
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY304610 vs. ExPASy Swiss-Prot
Match: P2C57_ARATH (Protein phosphatase 2C 57 OS=Arabidopsis thaliana GN=PPH1 PE=2 SV=2)

HSP 1 Score: 330.872 bits (847), Expect = 1.573e-92
Identity = 163/241 (67.63%), Postives = 197/241 (81.74%), Query Frame = 3
Query:  117 CSAIAIDAPSSLSGVAGIRWGSVSLQGLREEMEDGAVIQSDGLDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKKALQEAFENVDMKLLNRLEMNA-EEDESGATATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLXEIRRIREAGGWISNGRICGDIAVSRAFGDIRFKTKKNEMLKKGVNERRWSEKFVSRVQLNRDLVNGSPKIFK 836
            CSAIAIDAPSSL+GV  IRWG  S+QG R+EMED  VI+SD +D FS+AAVFDGH G S+VKFLR+ELYKECV ALQ G LL+G DF AIK+AL +AFE+VD  LL  LE N  EEDESG+TATVM I  D+ FI+H+GD C VLSR+G+ + LT+ HRPYGS + ++ E++R++EAGGWI NGRICGDIAVSRAFGDIRFKTKKN+MLKKGV+E RWSEKFVSR++   D+V  +P IF+
Sbjct:   41 CSAIAIDAPSSLTGVTPIRWGYTSVQGFRDEMEDDIVIRSDAVDSFSYAAVFDGHAGSSSVKFLREELYKECVGALQAGSLLNGGDFAAIKEALIKAFESVDRNLLKWLEANGDEEDESGSTATVMIIRNDVSFIAHIGDSCAVLSRSGQIEELTDYHRPYGSSRAAIQEVKRVKEAGGWIVNGRICGDIAVSRAFGDIRFKTKKNDMLKKGVDEGRWSEKFVSRIEFKGDMVVATPDIFQ 281          

HSP 2 Score: 31.187 bits (69), Expect = 1.573e-92
Identity = 11/21 (52.38%), Postives = 18/21 (85.71%), Query Frame = 2
Query:  830 FQVSLGSNAKFVLVASDGIWE 892
            FQV L S+ +F+++ASDG+W+
Sbjct:  280 FQVPLTSDVEFIILASDGLWD 300          
BLAST of DY304610 vs. ExPASy Swiss-Prot
Match: P2C05_ORYSJ (Probable protein phosphatase 2C 5 OS=Oryza sativa subsp. japonica GN=Os01g0552300 PE=2 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 1.588e-77
Identity = 147/254 (57.87%), Postives = 181/254 (71.26%), Query Frame = 3
Query:   96 RAKSQCYCSAIAIDA-PSSLSGVAGIRWGSVSLQGLREEMEDGAVIQSDGL-DGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKKALQEAFENVDMKLLNRLEMNAEEDESGATATVMFIGRDILFISHVGDCCV-VLSRTGKADVLTNPHRPYGSGQVSLXEIRRIREAGGWISNGRICGDIAVSRAFGDIRFKTKKNEMLKKGVNERRWSEKFVSRVQLNRDLVNGSPKIFKYLLG 848
            RA S  +C A A  +  SS S +  IRWG+  LQG R+EMED  V++   L DGFSFAAVFDGH G S V+FLRDELYKEC AAL GG +LS K+ DAI  ++Q AF  VD  L   LE   +EDESGATAT MF+  D+L +SH+GD C+ V+SR G+   +TN HRPYG+ + SL E++RIR AGGWI +GRICG+I+VSRAFGDIRFKT+KNEML KGV E RW+EKF+SR+    DL+  SP +    LG
Sbjct:   31 RAGSAAWCHASAAGSVASSSSELEAIRWGTAKLQGARDEMEDEVVLRPGSLLDGFSFAAVFDGHAGFSAVEFLRDELYKECAAALDGGAVLSTKNLDAITDSIQRAFATVDANLSTWLEQMDKEDESGATATAMFLRNDVLVVSHIGDSCLQVVSRGGRPQAVTNFHRPYGNKKASLEEVKRIRAAGGWIVDGRICGEISVSRAFGDIRFKTRKNEMLVKGVKEGRWTEKFISRINFKGDLIVSSPDVSLVELG 284          

HSP 2 Score: 28.4906 bits (62), Expect = 1.588e-77
Identity = 10/19 (52.63%), Postives = 16/19 (84.21%), Query Frame = 2
Query:  836 VSLGSNAKFVLVASDGIWE 892
            V LG + +FVL+A+DG+W+
Sbjct:  281 VELGPDVEFVLLATDGLWD 299          
BLAST of DY304610 vs. ExPASy Swiss-Prot
Match: P2C11_ARATH (Probable protein phosphatase 2C 11 OS=Arabidopsis thaliana GN=At1g43900 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.986e-21
Identity = 75/208 (36.06%), Postives = 112/208 (53.85%), Query Frame = 3
Query:  129 AIDAPSSLSGVAGIR-----WGSVSLQGLREEMEDGAVIQSDGLDG--FSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDA-IKKALQEAFENVDMKLLNRLEMNAEEDESGATATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLXEIRRIREAGG---WISNGRICGDIAVSRAFGDIRFK 719
            A+ +   +S +AG+R     +G  SL+G R  MED    +   ++G   +F  VFDGHGG  T ++L++ L+K          L+S  DF +  KKA+ E F+  D + L  +E   +   +G+TA   F+  D L +++VGD  VV SR G A  L++ H+P  S      E +RI +AGG   W    R+ G +AVSRAFGD + K
Sbjct:  104 ALFSGGGISFLAGVRTVKFSYGYSSLKGKRATMEDYFETRISDVNGQMVAFFGVFDGHGGARTAEYLKNNLFKN---------LVSHDDFISDTKKAIVEVFKQTDEEYL--IEEAGQPKNAGSTAATAFLIGDKLIVANVGDSRVVASRNGSAVPLSDDHKPDRS-----DERQRIEDAGGFIIWAGTWRVGGILAVSRAFGDKQLK 295          
BLAST of DY304610 vs. ExPASy Swiss-Prot
Match: PPMBL_MOUSE (Probable protein phosphatase 1B-like OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.290e-19
Identity = 64/192 (33.33%), Postives = 99/192 (51.56%), Query Frame = 3
Query:  153 SGVAGIRWGSVSLQGLREEMEDG--AVIQSDGL-DGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKKALQEAFENVDMKLLNRLEMNAEEDESGATATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLXEIRRIREAGGWISNGRICGDIAVSRAFGDIRFK 719
            +  +G+R+G+ ++QG R  MED   A +   GL  G++F AV DGHGG    +F    L       + G L  + ++ D +++AL+ AF   D +L     +    D  G+TA  + +    L+++H GD   +LSR+G     T  HRP+        E  RI +AGG +   R+ G +AVSRA GD  +K
Sbjct:   53 AATSGLRFGASAVQGWRARMEDAHCARLALPGLPSGWAFFAVLDGHGGARAARFGARHL----PGYVLGELGPAPQEPDGVRQALRSAFLQADAQLS---ALWPRGDPGGSTAVALLVSPRFLYLAHCGDSRALLSRSGSVAFCTEDHRPHRP-----RERERIHDAGGTVRRRRVEGSLAVSRALGDFAYK 232          
BLAST of DY304610 vs. ExPASy Swiss-Prot
Match: P2C69_ARATH (Probable protein phosphatase 2C 69 OS=Arabidopsis thaliana GN=At5g10740 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.781e-18
Identity = 65/200 (32.50%), Postives = 100/200 (50.00%), Query Frame = 3
Query:  132 IDAPSSLSGVAG---IRWGSVSLQGLREEMEDGAVIQSDGLDG--FSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKKALQEAFENVDMKLLNRLEMNAEEDESGATATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLXEIRRIREAGG---WISNGRICGDIAVSRAFGD 707
            ++AP+S  G++      +G  S  G R  MED    + DG++G       VFDGHGG    ++++  L+          L+   K     K A+ +A+ + D +LL     N+   ++G+TA+   +  D L +++VGD   V+SR GKA  ++  H+P  S      E  RI  AGG   W    R+ G +AVSRAFGD
Sbjct:   17 VEAPASGGGLSQNGKFSYGYASSAGKRSSMEDFFETRIDGINGEIVGLFGVFDGHGGARAAEYVKRHLFSN--------LITHPKFISDTKSAITDAYNHTDSELLK--SENSHNRDAGSTASTAILVGDRLVVANVGDSRAVISRGGKAIAVSRDHKPDQS-----DERERIENAGGFVMWAGTWRVGGVLAVSRAFGD 201          
BLAST of DY304610 vs. ExPASy Swiss-Prot
Match: PP2C2_PARTE (Probable protein phosphatase 2C 2 OS=Paramecium tetraurelia GN=GSPATT00030171001 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.231e-17
Identity = 70/256 (27.34%), Postives = 115/256 (44.92%), Query Frame = 3
Query:  114 YCSAIAIDAPSSLSGVAGIRWGSVSLQGLREEMEDGAVIQSDGLDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIK--KALQEAFENVDMKLLN---RLEMN------AEEDESGATATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLXEIRRIREAGGWISNGRICGDIAVSRAFGDIRFKTKKNEMLKKGVNERRWSEKFVSRVQLNRDLVNGSPKIFKYLLG 848
            Y S    D  ++      + + +  +QG R  MED  + + D +   S   VFDGHGG    +F+      E         LL  K+F   K  +AL+E F  +D  L+    + E+N       +E  +G TA V  I ++ L++++ GD   VL R      ++  H+P    + S     RI  AGG++S+GR+ G++ +SRA GD+ +K                     S++++N  L+   P + K  LG
Sbjct:    4 YLSQPKKDKTTTTGQGKSVIFAASEMQGWRNTMEDAHIHKPDVIQDVSIFGVFDGHGGREVAQFVEKHFIDE---------LLKNKNFKEQKFEEALKETFLKMDELLVTPEGQKELNQYKATDTDESYAGCTANVALIYKNTLYVANAGDSRTVLCRNNANYDMSVDHKPDNPEEKS-----RIERAGGFVSDGRVNGNLNLSRALGDLEYKRD-------------------SKLRVNEQLIIAIPDVKKVELG 226          

HSP 2 Score: 23.483 bits (49), Expect = 1.231e-17
Identity = 9/20 (45.00%), Postives = 14/20 (70.00%), Query Frame = 2
Query:  833 QVSLGSNAKFVLVASDGIWE 892
            +V LG   KF+L+  DG++E
Sbjct:  222 KVELGPQDKFLLLGCDGVFE 241          
BLAST of DY304610 vs. ExPASy Swiss-Prot
Match: P2C71_ARATH (Probable protein phosphatase 2C 71 OS=Arabidopsis thaliana GN=At5g24940 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.354e-17
Identity = 64/200 (32.00%), Postives = 98/200 (49.00%), Query Frame = 3
Query:  132 IDAPSSLSGVAG---IRWGSVSLQGLREEMEDGAVIQSDGLDG--FSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKKALQEAFENVDMKLLNRLEMNAEEDESGATATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLXEIRRIREAGG---WISNGRICGDIAVSRAFGD 707
            ++AP+S  G++      +G  S  G R  MED    + DG+DG       VFDGHGG    ++++  L+          L+   K     K A+ +A+ + D +LL     N+   ++G+TA+   +  D L +++VGD   V+ R G A  ++  H+P  S      E  RI  AGG   W    R+ G +AVSRAFGD
Sbjct:   17 VEAPASGGGLSQNGKFSYGYASSAGKRSSMEDFFETRIDGIDGEIVGLFGVFDGHGGSRAAEYVKRHLFSN--------LITHPKFISDTKSAIADAYTHTDSELLK--SENSHTRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAFAVSRDHKPDQS-----DERERIENAGGFVMWAGTWRVGGVLAVSRAFGD 201          
BLAST of DY304610 vs. ExPASy Swiss-Prot
Match: PPM1B_MOUSE (Protein phosphatase 1B OS=Mus musculus GN=Ppm1b PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.015e-17
Identity = 63/194 (32.47%), Postives = 95/194 (48.97%), Query Frame = 3
Query:  165 GIRWGSVSLQGLREEMEDG--AVIQ-SDGLDGFSFAAVFDGHGGVSTVKFLRDELYKECV------AALQGGLLLSGKDFDAIKKALQEAFENVDMKLLNRLEMNAEEDESGATATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLXEIRRIREAGGWISNGRICGDIAVSRAFGDIRFK 719
            G+R+G  S+QG R EMED   AV+    GLD +SF AV+DGH G     +    L +         AA + G  L     +++K  ++  F  +D  + N  ++    D SG+TA  + +    ++  + GD   VL R G+    T  H+P      +  E  RI+ AGG +   R+ G +AVSRA GD  +K
Sbjct:   21 GLRYGLSSMQGWRVEMEDAHTAVVGIPHGLDNWSFFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAADKSGSALE-PSVESVKTGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGVMVSPTHMYFINCGDSRAVLCRNGQVCFSTQDHKP-----CNPVEKERIQNAGGSVMIQRVNGSLAVSRALGDYDYK 208          
BLAST of DY304610 vs. ExPASy Swiss-Prot
Match: P2C59_ORYSJ (Probable protein phosphatase 2C 59 OS=Oryza sativa subsp. japonica GN=Os06g0698300 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.015e-17
Identity = 66/201 (32.84%), Postives = 97/201 (48.26%), Query Frame = 3
Query:  129 AIDAPSSLSGVAG---IRWGSVSLQGLREEMEDGAVIQSDGLDGFSFA--AVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKKALQEAFENVDMKLLNRLEMNAEEDESGATATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLXEIRRIREAGG---WISNGRICGDIAVSRAFGD 707
            A  +P S  G +      +G  S  G R  MED    + DG+DG +     VFDGHGG    +F++  L+          L+   K F   K A+ E + + D +LL + E +   D     +T + +G D L +++VGD   V+ R G A  ++  H+P  S      E +RI +AGG   W    R+ G +AVSRAFGD
Sbjct:   47 AAGSPGSGGGFSANGKFSYGYASSPGKRSSMEDFYDTRIDGVDGETVGLFGVFDGHGGARAAEFVKQNLFTN--------LIKHPKLFSDTKSAIAETYTSTDSELL-KAETSHNRDAGSTASTAILVG-DRLLVANVGDSRAVICRGGDAIAVSRDHKPDQS-----DERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGD 232          
BLAST of DY304610 vs. ExPASy Swiss-Prot
Match: PP2C2_CAEEL (Probable protein phosphatase 2C T23F11.1 OS=Caenorhabditis elegans GN=T23F11.1 PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 6.849e-17
Identity = 61/185 (32.97%), Postives = 96/185 (51.89%), Query Frame = 3
Query:  177 GSVSLQGLREEMEDGA--VIQSDGLDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDA--IKKALQEAFENVDMKLLNRLEMNAEEDESGATATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLXEIRRIREAGGWISNGRICGDIAVSRAFGDIRFK 719
            GS  +QG R +MED    ++        +F AV+DGHGG    ++    L+K+ VA          K+F    +K+A+++ F  +D ++  R++   ++D SG TA V+ I    ++  + GD   V S  G+A  L+  H+P         E RRI  AGGW+   R+ G++A+SRA GD  FK
Sbjct:   25 GSSCMQGWRVDMEDAHTHLLSLPDDPKCAFFAVYDGHGGSKVSQYSGINLHKKVVAQ---------KEFSEGNMKEAIEKGFLELDQQM--RVDEETKDDVSGTTAVVVLIKEGDVYCGNAGDSRAVSSVVGEARPLSFDHKPSHE-----TEARRIIAAGGWVEFNRVNGNLALSRALGDFAFK 193          
The following BLAST results are available for this feature:
BLAST of DY304610 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
P2C57_ARATH1.573e-9267.63Protein phosphatase 2C 57 OS=Arabidopsis thaliana ... [more]
P2C05_ORYSJ1.588e-7757.87Probable protein phosphatase 2C 5 OS=Oryza sativa ... [more]
P2C11_ARATH5.986e-2136.06Probable protein phosphatase 2C 11 OS=Arabidopsis ... [more]
PPMBL_MOUSE4.290e-1933.33Probable protein phosphatase 1B-like OS=Mus muscul... [more]
P2C69_ARATH2.781e-1832.50Probable protein phosphatase 2C 69 OS=Arabidopsis ... [more]
PP2C2_PARTE1.231e-1727.34Probable protein phosphatase 2C 2 OS=Paramecium te... [more]
P2C71_ARATH2.354e-1732.00Probable protein phosphatase 2C 71 OS=Arabidopsis ... [more]
PPM1B_MOUSE4.015e-1732.47Protein phosphatase 1B OS=Mus musculus GN=Ppm1b PE... [more]
P2C59_ORYSJ4.015e-1732.84Probable protein phosphatase 2C 59 OS=Oryza sativa... [more]
PP2C2_CAEEL6.849e-1732.97Probable protein phosphatase 2C T23F11.1 OS=Caenor... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAQ9YD02RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304610 ID=DY304610; Name=DY304610; organism=Citrus clementina; type=EST; length=892bp
TGCTGAACCAACAGTTACAGAGGTGTCTCTTAACAAGGCTCAACTATAAC
TTCAAGCCCACCGTCAAAAACAACTTTGTCAATACAACAACAGCAAGAGC
TAAAAGCCAGTGCTACTGCTCGGCGATTGCAATAGACGCGCCGTCTTCGT
TGAGTGGTGTTGCCGGAATCCGATGGGGGTCTGTAAGTTTACAGGGCCTA
CGTGAGGAAATGGAGGATGGTGCTGTTATTCAATCGGATGGCCTTGATGG
GTTCTCTTTTGCAGCTGTTTTTGATGGCCATGGTGGAGTCTCCACTGTCA
AGTTTCTTAGGGATGAGCTATACAAAGAATGTGTTGCAGCTTTACAAGGA
GGATTGCTGTTGAGTGGAAAAGATTTTGATGCCATTAAGAAGGCATTACA
GGAGGCTTTTGAAAATGTTGATATGAAATTGTTGAATAGGCTTGAAATGA
ATGCGGAGGAGGACGAATCCGGTGCAACCGCTACTGTTATGTTCATTGGA
AGGGATATTTTGTTCATCTCACATGTTGGTGACTGTTGTGTGGTTCTATC
TCGTACTGGAAAAGCAGATGTATTGACTAATCCTCATCGGCCTTATGGAA
GCGGCCAGGTCTCACTTCANGAAATTAGAAGAATCAGAGAAGCAGGTGGA
TGGATTTCCAATGGTAGGATATGTGGTGACATTGCTGTATCTCGTGCTTT
TGGTGACATCCGGTTCAAGACAAAGAAAAATGAGATGCTGAAGAAGGGTG
TTAATGAAAGAAGATGGTCAGAAAAATTTGTTTCTAGAGTGCAACTTAAC
AGGGACCTGGTTAATGGCTCACCGAAAATTTTCAAGTATCTCTTGGGTCA
AATGCAAAATTTGTACTGGTAGCCTCTGATGGAATATGGGAA
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