DY304613

Overview
NameDY304613
Unique NameDY304613
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length958
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY304613 vs. ExPASy Swiss-Prot
Match: Y1960_ARATH (Uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic OS=Arabidopsis thaliana GN=At1g79600 PE=1 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 4.072e-53
Identity = 99/149 (66.44%), Postives = 117/149 (78.52%), Query Frame = 3
Query:  321 SSGSGSVQKVLVGDRADDLQXXXXXXXXXXXXSVYSPELLARNYGSRPVQLLRRTLQILVALGSFSLKLLIDQRNGVLDQNKRKRAAELRRIFTRLGPTFVKLGQGLSTRPDICPPEYLEELSELQDALPTFPDAEAFSCIERELGLTL 767
            SS   SV +    D ADDLQ            S+YSPEL+AR +GS+P + LRR+L+IL ALG F+LKL IDQ+ G L++N +KRA ELRRIFTRLGPTFVKLGQGLSTRPD+CPP+YLEEL+ELQDALPTFPDAEAF+CIEREL L+L
Sbjct:   62 SSRPASVVQYRRADLADDLQAEARALGRAIDASIYSPELIARKHGSQPFKALRRSLEILGALGGFALKLGIDQKQGNLEKNMKKRAIELRRIFTRLGPTFVKLGQGLSTRPDLCPPDYLEELAELQDALPTFPDAEAFACIERELDLSL 210          

HSP 2 Score: 36.965 bits (84), Expect = 4.072e-53
Identity = 18/36 (50.00%), Postives = 22/36 (61.11%), Query Frame = 1
Query:  769 TRYSLPFPRPQCRCQFKPVYKAELKYSGSIVAVKVQ 876
            T +S   P P        VYKA+L+YSG +VAVKVQ
Sbjct:  212 TIFSSVSPEPIAAASLGQVYKAQLRYSGQVVAVKVQ 247          
BLAST of DY304613 vs. ExPASy Swiss-Prot
Match: Y1919_SYNY3 (Uncharacterized protein slr1919 OS=Synechocystis sp. (strain PCC 6803) GN=slr1919 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.902e-21
Identity = 51/116 (43.97%), Postives = 78/116 (67.24%), Query Frame = 3
Query:  423 YSPELLARNYGSRPVQLLRRTLQILVALGSFSLKLLIDQRNGVLDQNKRKRAAELRRIFTRLGPTFVKLGQGLSTRPDICPPEYLEELSELQDALPTFPDAEAFSCIERELGLTLN 770
            Y+ + +A  Y  RP ++L R L+++ + G F   LL DQ  G ++  KR+RA +LR + T+LGPTF+K+GQ LSTRPD+   ++LEEL +LQD LP F +  AF  +E +LG+ ++
Sbjct:   19 YNAQAIANYYRRRPWKVLWRALEVVWSFGFFLTCLLWDQWTGQVEYYKRQRAEDLRELLTKLGPTFIKVGQALSTRPDLVRRDFLEELIKLQDQLPPFDNDLAFQLMEEQLGMKVD 134          
BLAST of DY304613 vs. ExPASy Swiss-Prot
Match: Y005_SYNY3 (Uncharacterized protein sll0005 OS=Synechocystis sp. (strain PCC 6803) GN=sll0005 PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 6.656e-21
Identity = 51/112 (45.54%), Postives = 72/112 (64.29%), Query Frame = 3
Query:  423 YSPELLARNYGSRPVQLLRRTLQILVALGSFSLKLLIDQRNGVLDQNKRKRAAELRRIFTRLGPTFVKLGQGLSTRPDICPPEYLEELSELQDALPTFPDAEAFSCIERELG 758
            Y P+L+   Y  RP+Q+L R + IL  L  F L +  ++  G      R +A +LR + T LGPT++K+GQ LSTRPD+ PP +L+EL+ LQD LP+FP+  A+  IE ELG
Sbjct:   53 YHPDLIMEFYRKRPLQVLGRLINILFPLLRFILGIWWEKLRGKDPTVSRAKAIQLRELLTNLGPTYIKVGQALSTRPDLVPPVFLDELTTLQDQLPSFPNEVAYRFIEEELG 164          
BLAST of DY304613 vs. ExPASy Swiss-Prot
Match: Y1181_ARATH (Uncharacterized aarF domain-containing protein kinase At1g71810, chloroplastic OS=Arabidopsis thaliana GN=At1g71810 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.074e-18
Identity = 47/107 (43.93%), Postives = 64/107 (59.81%), Query Frame = 3
Query:  450 YGSRPVQLLRRTLQILVALGSFSLKLLIDQRNGVLDQNKRKRAAELRRIFTRLGPTFVKLGQGLSTRPDICPPEYLEELSELQDALPTFPDAEAFSCIERELGLTLN 770
            Y  +P+ LLRR  QI      +    L D+     DQ  + RAAELR++   LGP +VK+ Q +S+RPD+ PP YL+ELS LQD +  F    AF+ IE ELGL ++
Sbjct:   78 YKKKPLILLRRLAQIGTTFSYWFGLRLADEALERSDQMFKVRAAELRKLLVELGPAYVKIAQAVSSRPDLIPPIYLDELSLLQDQITPFSTEVAFNMIEDELGLPID 184          

HSP 2 Score: 30.4166 bits (67), Expect = 1.074e-18
Identity = 14/29 (48.28%), Postives = 17/29 (58.62%), Query Frame = 1
Query:  790 PRPQCRCQFKPVYKAELKYSGSIVAVKVQ 876
            P P        VY+A L+ SG +VAVKVQ
Sbjct:  192 PEPVAAASLGQVYQARLRRSGKVVAVKVQ 220          
BLAST of DY304613 vs. ExPASy Swiss-Prot
Match: Y4139_ARATH (Uncharacterized aarF domain-containing protein kinase At4g31390, chloroplastic OS=Arabidopsis thaliana GN=At4g31390 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.846e-14
Identity = 54/149 (36.24%), Postives = 77/149 (51.68%), Query Frame = 3
Query:  330 SGSVQKVLVGDRADDLQXXXXXXXXXXXXSVYSPELL-ARNYGSRP--VQLLRRTLQILVALGSFSLKLLIDQRNGVLDQNKRKRAAELRRIFTRLGPTFVKLGQGLSTRPDICPPEYLEELSELQDALPTFPDAEAFSCIERELGLTL 767
            SG  + V VG  +  L+              YSPE + ++   SR   V L+ R ++I+  LG +   L  D   G  ++    RA +LR +   LGP+F+K GQ L+ RPDI   +Y+ EL  LQD +P FP+  AF+ IE ELG  L
Sbjct:   82 SGVERGVRVGKSSSALEQLDIERGVCVPFRKYSPETVRSKVLESRGAVVSLVSRGVEIVWTLGLYWSTLTYDFLVGRDEEVVPFRARQLRNLLCNLGPSFIKAGQVLANRPDIIREDYMNELCILQDDVPPFPNEVAFNIIEEELGQPL 230          

HSP 2 Score: 23.483 bits (49), Expect = 3.846e-14
Identity = 10/18 (55.56%), Postives = 14/18 (77.78%), Query Frame = 1
Query:  823 VYKAELKYSGSIVAVKVQ 876
            VY+A L+ +G  VA+KVQ
Sbjct:  250 VYRATLRATGEDVAIKVQ 267          
BLAST of DY304613 vs. ExPASy Swiss-Prot
Match: Y1770_SYNY3 (Uncharacterized protein sll1770 OS=Synechocystis sp. (strain PCC 6803) GN=sll1770 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.336e-12
Identity = 35/69 (50.72%), Postives = 46/69 (66.67%), Query Frame = 3
Query:  552 LDQNKRKRAAELRRIFTRLGPTFVKLGQGLSTRPDICPPEYLEELSELQDALPTFPDAEAFSCIERELG 758
            L Q +R++A  +R     LGPTF+K+GQ  STR D+ P EY+EELS+LQD +P F   +A   IE ELG
Sbjct:   77 LQQRRRRQAKWIRENLLSLGPTFIKVGQLFSTRSDLFPAEYVEELSKLQDEVPAFSYEQAAGIIEEELG 145          

HSP 2 Score: 20.4014 bits (41), Expect = 9.336e-12
Identity = 10/14 (71.43%), Postives = 10/14 (71.43%), Query Frame = 2
Query:  791 PVPNAAASLSQFIK 832
            PVP AAASL Q  K
Sbjct:  157 PVPLAAASLGQVHK 170          
The following BLAST results are available for this feature:
BLAST of DY304613 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
Y1960_ARATH4.072e-5366.44Uncharacterized aarF domain-containing protein kin... [more]
Y1919_SYNY33.902e-2143.97Uncharacterized protein slr1919 OS=Synechocystis s... [more]
Y005_SYNY36.656e-2145.54Uncharacterized protein sll0005 OS=Synechocystis s... [more]
Y1181_ARATH1.074e-1843.93Uncharacterized aarF domain-containing protein kin... [more]
Y4139_ARATH3.846e-1436.24Uncharacterized aarF domain-containing protein kin... [more]
Y1770_SYNY39.336e-1250.72Uncharacterized protein sll1770 OS=Synechocystis s... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAQ9YD05RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304613 ID=DY304613; Name=DY304613; organism=Citrus clementina; type=EST; length=958bp
TCACGCTCTTAGAATGTGGCTGGGAGCTAGAGCCCAGAGCCGAGCAATAT
TAATGAAAGAAAAGAAAATCACAAGGCTTAATTTGGGAGCCAGGGCCCAG
AGCCGAGCAGCAAAAAGAAAAGAAAAGAAAATCACGAGGCAACCGTCAGT
GACCGTCGGTTGTCTGGAGCATACAAAACCAAACCGTTGCCATGAGTCTT
GTTTCTGCCGGAGGTTACTCCTTCGGCTTATTGCCATGTAGGTCTAGAAG
AAGAGCTAAAGCAATTGCCAAAGCGGCTCTGGTGGAAGCGAGGCCAAGAG
CAGTACCAGCGCTAAGGAAAAGCTCCGGTTCCGGTTCCGTACAAAAAGTT
TTGGTTGGGGACAGAGCGGACGACCTTCAAGCGGAGGCAAGAGCCATGGC
ACGTGCTGCAAATGCCTCCGTATACAGCCCCGAGCTTCTTGCCCGCAATT
ACGGTTCACGGCCTGTTCAGTTGTTGCGTAGAACCCTACAAATATTGGTA
GCCTTGGGTTCATTTTCTCTAAAACTATTAATTGACCAACGAAATGGAGT
GCTCGATCAGAACAAGAGAAAGCGCGCTGCTGAGCTGAGGAGAATCTTTA
CACGATTGGGTCCTACTTTTGTGAAATTGGGTCAGGGCTTATCCACCAGA
CCGGACATCTGCCCTCCTGAGTATCTCGAGGAGCTCTCTGAACTTCAGGA
CGCTCTGCCCACATTCCCGGATGCAGAAGCCTTTTCTTGCATTGAGAGAG
AGTTGGGATTAACACTCAACTCGATATTCTCTTCCATTTCCCCGTCCCCA
ATGCCGCTGCCAGTTTAAGCCAGTTTATAAAGCTGAGCTTAAGTACTCTG
GGTCAATTGTTGCTGTAAAGGTTCAACCTTCCCTGTATTGGAAAAGCAAT
AGGACGGGACTTTTACCTTATAAAAAGTTGTAGGATTTCCCCATCAAAAA
AATGGTTG
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