DY304617
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY304617 vs. ExPASy Swiss-Prot
Match: ABCE1_MOUSE (ATP-binding cassette sub-family E member 1 OS=Mus musculus GN=Abce1 PE=2 SV=1) HSP 1 Score: 435.261 bits (1118), Expect = 2.578e-121 Identity = 207/274 (75.55%), Postives = 236/274 (86.13%), Query Frame = 3 Query: 96 DKLTRIAIVNADRCKPKRCRQECKKSCPVVRMGKLCIEVTPNDKIATISEELCIGCGICVKKCPFDAITIINIPSNLEKHTTHRYSKNSFKLHRLPIPRPGEVLGLVGQNGIGKSTALKILAGKQKPNLGRYSDPPDWQEILSHFRGSELQNYFTKILEDDLKALIKPQYVDKIPKAVKGTVAQLLDNKDEMKNQTQICKMLDLSHIRDREIAALSGGELQRFAIAMVCIQNAELFMFEEPSF*LDVKHRLNPPRTKRSLNSPEKFFIVSEAQL 917 DKLTRIAIVN D+CKPK+CRQECKKSCPVVRMGKLCIEVTP KIA ISE LCIGCGIC+KKCPF A++I+N+PSNLEK TTHRY N+FKLHRLPIPRPGEVLGLVG NGIGKSTALKILAGKQKPNLG+Y DPPDWQEIL++FRGSELQNYFTKILEDDLKA+IKPQYVD+IPKA KGTV +LD KDE K Q +C+ LDL+H+++R + LSGGELQRFA A+VCIQ A++FMF+EPS LDVK RL T RSL +P+++ IV E L Sbjct: 3 DKLTRIAIVNHDKCKPKKCRQECKKSCPVVRMGKLCIEVTPQSKIAWISETLCIGCGICIKKCPFGALSIVNLPSNLEKETTHRYCANAFKLHRLPIPRPGEVLGLVGTNGIGKSTALKILAGKQKPNLGKYDDPPDWQEILTYFRGSELQNYFTKILEDDLKAIIKPQYVDQIPKAAKGTVGSILDRKDETKTQAIVCQQLDLTHLKERNVEDLSGGELQRFACAVVCIQKADIFMFDEPSSYLDVKQRLKAAITIRSLINPDRYIIVVEHDL 276
BLAST of DY304617 vs. ExPASy Swiss-Prot
Match: ABCE1_HUMAN (ATP-binding cassette sub-family E member 1 OS=Homo sapiens GN=ABCE1 PE=1 SV=1) HSP 1 Score: 435.261 bits (1118), Expect = 2.578e-121 Identity = 207/274 (75.55%), Postives = 236/274 (86.13%), Query Frame = 3 Query: 96 DKLTRIAIVNADRCKPKRCRQECKKSCPVVRMGKLCIEVTPNDKIATISEELCIGCGICVKKCPFDAITIINIPSNLEKHTTHRYSKNSFKLHRLPIPRPGEVLGLVGQNGIGKSTALKILAGKQKPNLGRYSDPPDWQEILSHFRGSELQNYFTKILEDDLKALIKPQYVDKIPKAVKGTVAQLLDNKDEMKNQTQICKMLDLSHIRDREIAALSGGELQRFAIAMVCIQNAELFMFEEPSF*LDVKHRLNPPRTKRSLNSPEKFFIVSEAQL 917 DKLTRIAIVN D+CKPK+CRQECKKSCPVVRMGKLCIEVTP KIA ISE LCIGCGIC+KKCPF A++I+N+PSNLEK TTHRY N+FKLHRLPIPRPGEVLGLVG NGIGKSTALKILAGKQKPNLG+Y DPPDWQEIL++FRGSELQNYFTKILEDDLKA+IKPQYVD+IPKA KGTV +LD KDE K Q +C+ LDL+H+++R + LSGGELQRFA A+VCIQ A++FMF+EPS LDVK RL T RSL +P+++ IV E L Sbjct: 3 DKLTRIAIVNHDKCKPKKCRQECKKSCPVVRMGKLCIEVTPQSKIAWISETLCIGCGICIKKCPFGALSIVNLPSNLEKETTHRYCANAFKLHRLPIPRPGEVLGLVGTNGIGKSTALKILAGKQKPNLGKYDDPPDWQEILTYFRGSELQNYFTKILEDDLKAIIKPQYVDQIPKAAKGTVGSILDRKDETKTQAIVCQQLDLTHLKERNVEDLSGGELQRFACAVVCIQKADIFMFDEPSSYLDVKQRLKAAITIRSLINPDRYIIVVEHDL 276
BLAST of DY304617 vs. ExPASy Swiss-Prot
Match: AB2E_ARATH (ABC transporter E family member 2 OS=Arabidopsis thaliana GN=ABCE2 PE=2 SV=1) HSP 1 Score: 407.912 bits (1047), Expect = 4.407e-113 Identity = 195/274 (71.17%), Postives = 230/274 (83.94%), Query Frame = 3 Query: 96 DKLTRIAIVNADRCKPKRCRQECKKSCPVVRMGKLCIEVTPNDKIATISEELCIGCGICVKKCPFDAITIINIPSNLEKHTTHRYSKNSFKLHRLPIPRPGEVLGLVGQNGIGKSTALKILAGKQKPNLGRYSDPPDWQEILSHFRGSELQNYFTKILEDDLKALIKPQYVDKIPKAVKGTVAQLLDNKDEMKNQTQICKMLDLSHIRDREIAALSGGELQRFAIAMVCIQNAELFMFEEPSF*LDVKHRLNPPRTKRSLNSPEKFFIVSEAQL 917 D+LTRIAIV++DRCKPK+CRQECKKSCPVV+ GKLCIEVT K+A ISEELCIGCGICVKKCPF+AI IIN+P +LEK TTHRY N+FKLHRLP+PRPG+VLGLVG NGIGKSTALKILAGK KPNLGR++ PPDWQEIL+HFRGSELQNYFT+ILED+LKA+IKPQYVD IP+AVKG V ++LD KDE + ++C L+L+ + DR++ LSGGELQRFAIA+V IQNAE++MF+EPS LDVK RL + RSL P + IV E L Sbjct: 3 DRLTRIAIVSSDRCKPKKCRQECKKSCPVVKTGKLCIEVTVGSKLAFISEELCIGCGICVKKCPFEAIQIINLPRDLEKDTTHRYGANTFKLHRLPVPRPGQVLGLVGTNGIGKSTALKILAGKLKPNLGRFTSPPDWQEILTHFRGSELQNYFTRILEDNLKAIIKPQYVDHIPRAVKGNVGEVLDQKDERDKKAELCADLELNQVIDRDVENLSGGELQRFAIAVVAIQNAEIYMFDEPSSYLDVKQRLKAAQVVRSLLRPNSYVIVVEHDL 276
BLAST of DY304617 vs. ExPASy Swiss-Prot
Match: RLI1_YEAST (Translation initiation factor RLI1 OS=Saccharomyces cerevisiae GN=RLI1 PE=1 SV=1) HSP 1 Score: 387.497 bits (994), Expect = 6.164e-107 Identity = 189/280 (67.50%), Postives = 226/280 (80.71%), Query Frame = 3 Query: 93 TDKLTRIAIVNADRCKPKRCRQECKKSCPVVRMGKLCIEVTPNDKIATISEELCIGCGICVKKCPFDAITIINIPSNLEKHTTHRYSKNSFKLHRLPIPRPGEVLGLVGQNGIGKSTALKILAGKQKPNLGRYSDPPDWQEILSHFRGSELQNYFTKILEDDLKALIKPQYVDKIPKAVKGTVAQL-----LDNKDEMKNQTQICKMLDLSHIRDREIAALSGGELQRFAIAMVCIQNAELFMFEEPSF*LDVKHRLNPPRTKRSLNSPEKFFIVSEAQL 917 +DK +RIAIV+AD+CKPK+CRQECK+SCPVV+ GKLCIEVTP KIA ISE LCIGCGICVKKCPFDAI IIN+P+NLE H THRYS NSFKLHRLP PRPG+VLGLVG NGIGKSTALKILAGKQKPNLGR+ DPP+WQEI+ +FRGSELQNYFTK+LEDD+KA+IKPQYVD IP+A+KG V ++ L + ++ + K+L L ++ R+I LSGGELQRFAI M C+Q A+++MF+EPS LDVK RLN + RSL +P K+ I E L Sbjct: 2 SDKNSRIAIVSADKCKPKKCRQECKRSCPVVKTGKLCIEVTPTSKIAFISEILCIGCGICVKKCPFDAIQIINLPTNLEAHVTHRYSANSFKLHRLPTPRPGQVLGLVGTNGIGKSTALKILAGKQKPNLGRFDDPPEWQEIIKYFRGSELQNYFTKMLEDDIKAIIKPQYVDNIPRAIKGPVQKVGELLKLRMEKSPEDVKRYIKILQLENVLKRDIEKLSGGELQRFAIGMSCVQEADVYMFDEPSSYLDVKQRLNAAQIIRSLLAPTKYVICVEHDL 281
BLAST of DY304617 vs. ExPASy Swiss-Prot
Match: YOX6_SCHPO (Uncharacterized ABC transporter ATP-binding protein C14F5.06 OS=Schizosaccharomyces pombe GN=SPBC14F5.06 PE=2 SV=1) HSP 1 Score: 365.54 bits (937), Expect = 2.508e-100 Identity = 177/278 (63.67%), Postives = 217/278 (78.06%), Query Frame = 3 Query: 93 TDKLTRIAIVNADRCKPKRCRQECKKSCPVVRMGKLCIEVTPNDKIATISEELCIGCGICVKKCPFDAITIINIPSNLEKHTTHRYSKNSFKLHRLPIPRPGEVLGLVGQNGIGKSTALKILAGKQKPNLGRYSDPPDWQEILSHFRGSELQNYFTKILEDDLKALIKPQYVDKIPKAVK---GTVAQLLDNKDEMKNQTQICKMLDLSHIRDREIAALSGGELQRFAIAMVCIQNAELFMFEEPSF*LDVKHRLNPPRTKRSLNSPEKFFIVSEAQL 917 ++ LTRIAIV+ D+C+PK+CRQEC++SCPVVR GKLCIEV P D+IA ISE LCIGCGICVKKCPF AI IIN+P+NLE THRYS NSFKLHRLP PRPG+VLGLVG NGIGKSTALKIL+GK KPNLGRY +PPDW E++ +FRGSELQN+FTK++ED++KALIKPQYVD IP+A+K TV+ L+ + N ++ DL ++ +RE+ LSGGELQRFAIA V Q A+++MF+EPS LD+K RL R RSL + + IV E L Sbjct: 2 SESLTRIAIVSEDKCRPKKCRQECRRSCPVVRTGKLCIEVNPTDRIAFISETLCIGCGICVKKCPFGAINIINLPTNLESEVTHRYSANSFKLHRLPTPRPGQVLGLVGTNGIGKSTALKILSGKMKPNLGRYDNPPDWAEVVKYFRGSELQNFFTKVVEDNIKALIKPQYVDHIPRAIKTGDKTVSGLIKARANNNNFEEVMDHTDLQNLLNREVGHLSGGELQRFAIAAVATQKADVYMFDEPSSYLDIKQRLKAGRVIRSLLATTNYVIVVEHDL 279
BLAST of DY304617 vs. ExPASy Swiss-Prot
Match: AB1E_ARATH (ABC transporter E family member 1 OS=Arabidopsis thaliana GN=ABCE1 PE=2 SV=1) HSP 1 Score: 360.533 bits (924), Expect = 8.069e-99 Identity = 173/275 (62.91%), Postives = 216/275 (78.55%), Query Frame = 3 Query: 93 TDKLTRIAIVNADRCKPKRCRQECKKSCPVVRMGKLCIEVTPNDKIATISEELCIGCGICVKKCPFDAITIINIPSNLEKHTTHRYSKNSFKLHRLPIPRPGEVLGLVGQNGIGKSTALKILAGKQKPNLGRYSDPPDWQEILSHFRGSELQNYFTKILEDDLKALIKPQYVDKIPKAVKGTVAQLLDNKDEMKNQTQICKMLDLSHIRDREIAALSGGELQRFAIAMVCIQNAELFMFEEPSF*LDVKHRLNPPRTKRSLNSPEKFFIVSEAQL 917 +D+LTRIAIV+ DRCKPK+CRQECKKSCPVV+ GKLCIEV K A ISEELCIGCGICVKKCPF+AI IIN+P +L K TTHRY N FKLHRLPIPRPG+VLGLVG NGIGKSTALKILAGK KPNLGR++ PPDW+EIL+HFRGSELQ+YF +++E++LK IKPQ+VD I + V+G + ++L+ DE +IC ++L+ + +RE +SGGELQRFAIA V ++ A+++MF+EPS LDV+ RL + RSL + + IV E L Sbjct: 2 SDRLTRIAIVSEDRCKPKKCRQECKKSCPVVKTGKLCIEVGSTSKSAFISEELCIGCGICVKKCPFEAIQIINLPKDLAKDTTHRYGANGFKLHRLPIPRPGQVLGLVGTNGIGKSTALKILAGKLKPNLGRFNTPPDWEEILTHFRGSELQSYFIRVVEENLKTAIKPQHVDYIKEVVRGNLGKMLEKLDERGLMEEICADMELNQVLEREARQVSGGELQRFAIAAVFVKKADIYMFDEPSSYLDVRQRLKAAQVIRSLLRHDSYVIVVEHDL 276
BLAST of DY304617 vs. ExPASy Swiss-Prot
Match: Y719_METJA (Uncharacterized ABC transporter ATP-binding protein MJ0719 OS=Methanocaldococcus jannaschii GN=MJ0719 PE=3 SV=1) HSP 1 Score: 265.774 bits (678), Expect = 2.705e-70 Identity = 138/282 (48.94%), Postives = 185/282 (65.60%), Query Frame = 3 Query: 108 RIAIVNADRCKPKRCRQECKKSCPVVRMGKLCIEVTPNDKIATISEELCIGCGICVKKCPFDAITIINIPSNL-EKHTTHRYSKNSFKLHRLPIPRPGEVLGLVGQNGIGKSTALKILAGKQKPNLGRYSDPPDWQEILSHFRGSELQNYFTKILEDDLKALIKPQYVDKIPKAVKGTVAQLLDNKDEMKNQTQICKMLDLSHIRDREIAALSGGELQRFAIAMVCIQNAELFMFEEPSF*LDVKHRLNPPRTKRSLNSPEKFFIVSEAQLVLPGLPLRIHL 950 R+AI++ DRC+PK+C EC K CP VRMG+ IE+ N ISE LC GCGICVK+CPF AI+II +P L E H Y +N FKL L IPR G V+G++GQNGIGKST L+ILAG+ PNLG++ P++ +++ +FRG+ELQ YF K+ +KA+ K QYVD +PK VKG V LL DE ++ + L+L +I DRE++ LSGGELQR AIA ++N +++ F+EPS LD++ R N R R LN K +V +VL L IH+ Sbjct: 14 RLAIIDYDRCQPKKCSMECMKYCPGVRMGEKTIEIDENTGKPVISEVLCSGCGICVKRCPFKAISIIGLPEELSEDKIVHSYGQNRFKLFGLVIPRDG-VVGIIGQNGIGKSTVLRILAGELIPNLGKHDKEPNYDDVIKYFRGTELQEYFEKLKNKGVKAIHKVQYVDILPKVVKGKVGDLLKKVDEKGKFDEVVEKLELKNILDRELSQLSGGELQRVAIAAAYLRNGDIYFFDEPSSWLDIRQRFNAARLIRELN---KVVVVEHDLIVLDYLSDYIHI 291 HSP 2 Score: 87.4261 bits (215), Expect = 1.318e-16 Identity = 59/163 (36.20%), Postives = 84/163 (51.53%), Query Frame = 3 Query: 396 GEVLGLVGQNGIGKSTALKILAGKQKPNLGRYSDPPDWQEILSHFRGSELQNYFTKILEDDLKALIKPQYVDKIPKAVKGTVAQLLDNKDEMKN---QTQICKMLDLSHIRDREIAALSGGELQRFAIAMVCIQNAELFMFEEPSF*LDVKHRLNPPRTKRSL 875 GEV+G++G NGIGK+T +K+LAG KP+ G I E D+K KPQY I GTV LL + + +++I L L + DRE+ LSGGELQR AIA ++A++++ +EPS LDV+ RL + R + Sbjct: 373 GEVIGILGPNGIGKTTFVKLLAGVIKPDEGEV------------------------IKEGDIKVSYKPQY---ITPDYDGTVEDLLSSITNIHTSYYKSEIINPLQLEKLLDREVRELSGGELQRVAIAACLSRDADIYLLDEPSAFLDVEQRLRVSKVIRRI 508
BLAST of DY304617 vs. ExPASy Swiss-Prot
Match: Y4021_METAC (Putative ABC transporter ATP-binding protein MA_4021 OS=Methanosarcina acetivorans GN=MA_4021 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.732e-12 Identity = 52/184 (28.26%), Postives = 93/184 (50.54%), Query Frame = 3 Query: 393 PGEVLGLVGQNGIGKSTALKILAGKQKPNLGRYS--DPPDWQEILSHFRGSELQNYF-TKI---LEDDLKALIKPQYVDKIPKAVKGTVAQLLDNKDEMKNQT-QICKMLDLSHIRDREIAALSGGELQRFAIAMVCIQNAELFMFEEPSF*LDVKHRLNPPRTKRSLNSPEKFFIVSEAQLVL 923 PGE + ++G NG GKST L +L G P +G + D +E+ + +E ++YF TK+ ++ L P +++ QL +E+K + ++ +M++L+ ++DR LSGGE ++ IA V N ++ + +EP+ LD + +L + L S K I++ L L Sbjct: 30 PGEQISIIGSNGSGKSTLLSLLDGLIYPTVGEFYAFDNKIVEEVFDTIKDNEFRSYFRTKVGFLFQNSDVQLFSPTVFEEVAFGP----LQLNITPEEVKTRVLEVLEMMELTKLKDRSPHTLSGGEKKKLCIATVLATNPDVLLLDEPTAGLDPRTQLWLTELLQELGSMGKTIIIATHDLEL 209
BLAST of DY304617 vs. ExPASy Swiss-Prot
Match: Y753_CLOTE (Putative ABC transporter ATP-binding protein CTC_00753 OS=Clostridium tetani GN=CTC_00753 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.178e-11 Identity = 61/206 (29.61%), Postives = 100/206 (48.54%), Query Frame = 3 Query: 321 NLEKHTTHRYSKN-SFKLHRLPIPRPGEVLGLVGQNGIGKSTALKILAGKQKPNLGRYSDPPDWQEILSHFRGSEL---QNYFTKILEDDLKALIKPQYVDKIP------KAVKGTVAQLLDNKDEMKNQT--QICKMLDLSHIRDREIAALSGGELQRFAIAMVCIQNAELFMFEEPSF*LDVKHRLNPPRTKRSLNSPEKFFIV 902 N E ++ K+ SFKLHR GE++ ++G+NG GKST KI+AG ++ ++G L +N + L++ +K K Y+ + P K V V L N E K + Q+ K+L++S++ D+ LSGGE QR AIA I + E+ + +EP+ +D + + N ++L K +V Sbjct: 192 NFEYERGYKILKDLSFKLHR------GEIMTVMGENGAGKSTLFKIIAG-----------------MIDKYKGKVLIDNKNIKSLKLKERIK---KIGYLSQNPNDYFGRKTVFEEVGYTLKNIGEYKEEKVEQVMKLLNISYLEDKNPRDLSGGEKQRVAIACTIITDPEILILDEPTRGMDAEAKENLGEIIKTLAEVGKSIVV 371 The following BLAST results are available for this feature:
BLAST of DY304617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY304617 ID=DY304617; Name=DY304617; organism=Citrus clementina; type=EST; length=965bpback to top |