DY304625

Overview
NameDY304625
Unique NameDY304625
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length949
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY304625 vs. ExPASy Swiss-Prot
Match: DRP1B_ARATH (Dynamin-related protein 1B OS=Arabidopsis thaliana GN=DRP1B PE=2 SV=1)

HSP 1 Score: 389.423 bits (999), Expect = 1.582e-107
Identity = 199/236 (84.32%), Postives = 214/236 (90.68%), Query Frame = 2
Query:  146 MDNLITLVNKIQRACTALGDHGEESALPTLWDSLPSIAXXXXXXXXXXXXLESVVGKDFLPRGSGIVTRRPLVLQLHKIQEGKEYAEFMHLPRKRFNDFAAVRKEISDETDRETGRS-KAISTVPIHLSIFSPNVVNLTLIDLPGLTKVAVDGQPESIVQDIENMVRSYIEKPNCIILAISPANQDLATSDAIKISREVDPRGDRTFGVLTKIDLMGQGTDAVEILEGKSNKLRDP 850
            M++LI LVNKIQRACTALGDHGE S+LPTLWDSLP+IA            LESVVGKDFLPRG+GIVTRRPLVLQLH+I EGKEYAEFMHLP+K+F DFAAVR+EISDETDRETGRS K ISTVPIHLSIFSPNVVNLTL+DLPGLTKVAVDGQPESIVQDIENMVRS+IEKPNCIILAISPANQDLATSDAIKISREVDP+GDRTFGVLTKIDLM QGT+AV+ILEG+  KLR P
Sbjct:    1 MESLIALVNKIQRACTALGDHGEGSSLPTLWDSLPAIAVVGGQSSGKSSVLESVVGKDFLPRGAGIVTRRPLVLQLHRIDEGKEYAEFMHLPKKKFTDFAAVRQEISDETDRETGRSSKVISTVPIHLSIFSPNVVNLTLVDLPGLTKVAVDGQPESIVQDIENMVRSFIEKPNCIILAISPANQDLATSDAIKISREVDPKGDRTFGVLTKIDLMDQGTNAVDILEGRGYKLRYP 236          
BLAST of DY304625 vs. ExPASy Swiss-Prot
Match: DRP1A_ARATH (Dynamin-related protein 1A OS=Arabidopsis thaliana GN=DRP1A PE=1 SV=3)

HSP 1 Score: 384.415 bits (986), Expect = 5.090e-106
Identity = 197/236 (83.47%), Postives = 213/236 (90.25%), Query Frame = 2
Query:  146 MDNLITLVNKIQRACTALGDHGEESALPTLWDSLPSIAXXXXXXXXXXXXLESVVGKDFLPRGSGIVTRRPLVLQLHKIQEG-KEYAEFMHLPRKRFNDFAAVRKEISDETDRETGRSKAISTVPIHLSIFSPNVVNLTLIDLPGLTKVAVDGQPESIVQDIENMVRSYIEKPNCIILAISPANQDLATSDAIKISREVDPRGDRTFGVLTKIDLMGQGTDAVEILEGKSNKLRDP 850
            M+NLI+LVNKIQRACTALGDHG+ SALPTLWDSLP+IA            LES+VGKDFLPRGSGIVTRRPLVLQL KI +G +EYAEF+HLPRK+F DFAAVRKEI DETDRETGRSKAIS+VPIHLSI+SPNVVNLTLIDLPGLTKVAVDGQ +SIV+DIENMVRSYIEKPNCIILAISPANQDLATSDAIKISREVDP GDRTFGVLTKIDLM +GTDAVEILEG+S KL+ P
Sbjct:    1 MENLISLVNKIQRACTALGDHGDSSALPTLWDSLPAIAVVGGQSSGKSSVLESIVGKDFLPRGSGIVTRRPLVLQLQKIDDGTREYAEFLHLPRKKFTDFAAVRKEIQDETDRETGRSKAISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVDGQSDSIVKDIENMVRSYIEKPNCIILAISPANQDLATSDAIKISREVDPSGDRTFGVLTKIDLMDKGTDAVEILEGRSFKLKYP 236          
BLAST of DY304625 vs. ExPASy Swiss-Prot
Match: SDL5A_SOYBN (Dynamin-related protein 5A OS=Glycine max PE=2 SV=1)

HSP 1 Score: 382.874 bits (982), Expect = 1.481e-105
Identity = 194/236 (82.20%), Postives = 213/236 (90.25%), Query Frame = 2
Query:  146 MDNLITLVNKIQRACTALGDHGEESALPTLWDSLPSIAXXXXXXXXXXXXLESVVGKDFLPRGSGIVTRRPLVLQLHKIQEG-KEYAEFMHLPRKRFNDFAAVRKEISDETDRETGRSKAISTVPIHLSIFSPNVVNLTLIDLPGLTKVAVDGQPESIVQDIENMVRSYIEKPNCIILAISPANQDLATSDAIKISREVDPRGDRTFGVLTKIDLMGQGTDAVEILEGKSNKLRDP 850
            M+NLI+LVNKIQRACTALGDHGE SALPTLWDSLP+IA            LESVVGKDFLPRGSGIVTRRPLVLQLHKI+EG +EYAEF+HLPRKRF DF AVRKEI DETDRETGR+K ISTVPIHLSI+SPNVVNLTL+DLPGLTKVAV+GQP+SIV+DIE+MVRSYIEKPNCIILAISPANQDLATSDAIKISREVDP GDRT GVLTKIDLM +GTDAV+ILEG++ +L+ P
Sbjct:    1 MENLISLVNKIQRACTALGDHGENSALPTLWDSLPAIAVVGGQSSGKSSVLESVVGKDFLPRGSGIVTRRPLVLQLHKIEEGSREYAEFLHLPRKRFTDFVAVRKEIQDETDRETGRTKQISTVPIHLSIYSPNVVNLTLVDLPGLTKVAVEGQPDSIVKDIEDMVRSYIEKPNCIILAISPANQDLATSDAIKISREVDPTGDRTIGVLTKIDLMDKGTDAVDILEGRAYRLKFP 236          
BLAST of DY304625 vs. ExPASy Swiss-Prot
Match: SDLCA_SOYBN (Dynamin-related protein 12A OS=Glycine max PE=1 SV=1)

HSP 1 Score: 380.948 bits (977), Expect = 5.628e-105
Identity = 194/236 (82.20%), Postives = 212/236 (89.83%), Query Frame = 2
Query:  146 MDNLITLVNKIQRACTALGDHGEESALPTLWDSLPSIAXXXXXXXXXXXXLESVVGKDFLPRGSGIVTRRPLVLQLHKIQEG-KEYAEFMHLPRKRFNDFAAVRKEISDETDRETGRSKAISTVPIHLSIFSPNVVNLTLIDLPGLTKVAVDGQPESIVQDIENMVRSYIEKPNCIILAISPANQDLATSDAIKISREVDPRGDRTFGVLTKIDLMGQGTDAVEILEGKSNKLRDP 850
            M+NLI+LVNKIQRACTALGDHGE SALPTLWDSLP+IA            LESVVGKDFLPRGSGIVTRRPLVLQLHKI EG +EYAEF+HLPRKRF DF AVRKEI DETDRETGR+K IS+VPIHLSI+SPNVVNLTLIDLPGLTKVAV+GQP+SIV+DIE+MVRSYIEKPNCIILAISPANQDLATSDAIKISREVDP GDRT GVLTKIDLM +GTDAV+ILEG++ +L+ P
Sbjct:    1 MENLISLVNKIQRACTALGDHGENSALPTLWDSLPAIAVVGGQSSGKSSVLESVVGKDFLPRGSGIVTRRPLVLQLHKIDEGSREYAEFLHLPRKRFTDFVAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVKDIEDMVRSYIEKPNCIILAISPANQDLATSDAIKISREVDPTGDRTIGVLTKIDLMDKGTDAVDILEGRAYRLKFP 236          
BLAST of DY304625 vs. ExPASy Swiss-Prot
Match: DRP1C_ARATH (Dynamin-related protein 1C OS=Arabidopsis thaliana GN=DRP1C PE=1 SV=2)

HSP 1 Score: 341.658 bits (875), Expect = 3.783e-93
Identity = 171/236 (72.46%), Postives = 200/236 (84.75%), Query Frame = 2
Query:  146 MDNLITLVNKIQRACTALGDHGEESALPTLWDSLPSIAXXXXXXXXXXXXLESVVGKDFLPRGSGIVTRRPLVLQLHKIQEGK-EYAEFMHLPRKRFNDFAAVRKEISDETDRETGRSKAISTVPIHLSIFSPNVVNLTLIDLPGLTKVAVDGQPESIVQDIENMVRSYIEKPNCIILAISPANQDLATSDAIKISREVDPRGDRTFGVLTKIDLMGQGTDAVEILEGKSNKLRDP 850
            M +LI L+NKIQRACT LGDHG E    +LW++LP++A            LESVVG+DFLPRGSGIVTRRPLVLQLHK ++G  EYAEF+H P+KRF DFAAVRKEI DETDR TG+SK IS +PI LSI+SPNVVNLTLIDLPGLTKVAVDGQPESIVQDIENMVRSY+EKPNCIILAISPANQD+ATSDAIK++REVDP G+RTFGV TK+D+M +GTD +++LEG+S +L+ P
Sbjct:    4 MKSLIGLINKIQRACTVLGDHGGEGM--SLWEALPTVAVVGGQSSGKSSVLESVVGRDFLPRGSGIVTRRPLVLQLHKTEDGTTEYAEFLHAPKKRFADFAAVRKEIEDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVDGQPESIVQDIENMVRSYVEKPNCIILAISPANQDIATSDAIKLAREVDPTGERTFGVATKLDIMDKGTDCLDVLEGRSYRLQHP 237          
BLAST of DY304625 vs. ExPASy Swiss-Prot
Match: DRP1E_ARATH (Dynamin-related protein 1E OS=Arabidopsis thaliana GN=DRP1E PE=1 SV=1)

HSP 1 Score: 331.643 bits (849), Expect = 3.915e-90
Identity = 163/241 (67.63%), Postives = 205/241 (85.06%), Query Frame = 2
Query:  140 TLMDNLITLVNKIQRACTALGDHGE---ESALPTLWDSLPSIAXXXXXXXXXXXXLESVVGKDFLPRGSGIVTRRPLVLQLHKIQEG-KEYAEFMHLPRKRFNDFAAVRKEISDETDRETGRSKAISTVPIHLSIFSPNVVNLTLIDLPGLTKVAVDGQPESIVQDIENMVRSYIEKPNCIILAISPANQDLATSDAIKISREVDPRGDRTFGVLTKIDLMGQGTDAVEILEGKSNKLRDP 850
            T M++LI LVN+IQRACT LGD+G     +A  +LW++LP++A            LES+VG+DFLPRGSGIVTRRPLVLQLHK  +G +EYAEF+HLP+K+F DFA VR+EI DETDR TG++K IS VPIHLSI+SPNVVNLTLIDLPGLTKVAV+GQPE+I +DIE+MVR+Y++KPNCIILAISPANQD+ATSDAIK++++VDP G+RTFGVLTK+DLM +GT+A+E+LEG+S +L+ P
Sbjct:    2 TTMESLIGLVNRIQRACTVLGDYGGGTGSNAFNSLWEALPTVAVVGGQSSGKSSVLESIVGRDFLPRGSGIVTRRPLVLQLHKTDDGTEEYAEFLHLPKKQFTDFALVRREIQDETDRITGKNKQISPVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPETIAEDIESMVRTYVDKPNCIILAISPANQDIATSDAIKLAKDVDPTGERTFGVLTKLDLMDKGTNALEVLEGRSYRLQHP 242          
BLAST of DY304625 vs. ExPASy Swiss-Prot
Match: DRP1D_ARATH (Dynamin-related protein 1D OS=Arabidopsis thaliana GN=DRP1D PE=2 SV=2)

HSP 1 Score: 328.946 bits (842), Expect = 2.538e-89
Identity = 162/237 (68.35%), Postives = 202/237 (85.23%), Query Frame = 2
Query:  146 MDNLITLVNKIQRACTALGDHGEES-ALPTLWDSLPSIAXXXXXXXXXXXXLESVVGKDFLPRGSGIVTRRPLVLQLHKIQEGKE-YAEFMHLPRKRFNDFAAVRKEISDETDRETGRSKAISTVPIHLSIFSPNVVNLTLIDLPGLTKVAVDGQPESIVQDIENMVRSYIEKPNCIILAISPANQDLATSDAIKISREVDPRGDRTFGVLTKIDLMGQGTDAVEILEGKSNKLRDP 850
            M++LI L+N IQRACT +GDHG +S AL +LW++LPS+A            LES+VG+DFLPRGSGIVTRRPLVLQLHK + G E  AEF+HL  K+F +F+ VRKEI DETDR TG++K IS++PIHLSIFSPNVVNLTLIDLPGLTKVAV+GQPE+IV+DIE+MVRSY+EKPNC+ILAISPANQD+ATSDA+K+++EVDP GDRTFGVLTK+DLM +GT+A++++ G+S KL+ P
Sbjct:    1 MESLIVLINTIQRACTVVGDHGGDSNALSSLWEALPSVAVVGGQSSGKSSVLESIVGRDFLPRGSGIVTRRPLVLQLHKTENGTEDNAEFLHLTNKKFTNFSLVRKEIEDETDRITGKNKQISSIPIHLSIFSPNVVNLTLIDLPGLTKVAVEGQPETIVEDIESMVRSYVEKPNCLILAISPANQDIATSDAMKLAKEVDPIGDRTFGVLTKLDLMDKGTNALDVINGRSYKLKYP 237          
BLAST of DY304625 vs. ExPASy Swiss-Prot
Match: DYN_DROME (Dynamin OS=Drosophila melanogaster GN=shi PE=1 SV=2)

HSP 1 Score: 245.358 bits (625), Expect = 3.690e-64
Identity = 130/233 (55.79%), Postives = 165/233 (70.82%), Query Frame = 2
Query:  146 MDNLITLVNKIQRACTALGDHGEESALPTLWDSLPSIAXXXXXXXXXXXXLESVVGKDFLPRGSGIVTRRPLVLQLHKIQEGKEYAEFMHLPRKRFNDFAAVRKEISDETDRETGRSKAISTVPIHLSIFSPNVVNLTLIDLPGLTKVAVDGQPESIVQDIENMVRSYIEKPNCIILAISPANQDLATSDAIKISREVDPRGDRTFGVLTKIDLMGQGTDAVEILEGKSNKLR 844
            MD+LIT+VNK+Q A T+LG H +          LP IA            LE+ VGKDFLPRGSGIVTRRPL+LQL  I    EY EF+H+  K+F+ F  +RKEI DETDR TG +K IS +PI+L ++SP+V+NLTLIDLPGLTKVA+  QP  I Q I+ M+  +I K  C+ILA++PAN DLA SDA+K+++EVDP+G RT GV+TK+DLM +GTDA +ILE K   LR
Sbjct:    1 MDSLITIVNKLQDAFTSLGVHMQLD--------LPQIAVVGGQSAGKSSVLENFVGKDFLPRGSGIVTRRPLILQL--INGVTEYGEFLHIKGKKFSSFDEIRKEIEDETDRVTGSNKGISNIPINLRVYSPHVLNLTLIDLPGLTKVAIGDQPVDIEQQIKQMIFQFIRKETCLILAVTPANTDLANSDALKLAKEVDPQGVRTIGVITKLDLMDEGTDARDILENKLLPLR 223          
BLAST of DY304625 vs. ExPASy Swiss-Prot
Match: DYN1_CAEEL (Dynamin OS=Caenorhabditis elegans GN=dyn-1 PE=1 SV=3)

HSP 1 Score: 244.973 bits (624), Expect = 4.820e-64
Identity = 137/242 (56.61%), Postives = 169/242 (69.83%), Query Frame = 2
Query:  119 LSDQNQSTLMDNLITLVNKIQRACTALGDHGEESALPTLWDSLPSIAXXXXXXXXXXXXLESVVGKDFLPRGSGIVTRRPLVLQLHKIQEGKEYAEFMHLPRKRFNDFAAVRKEISDETDRETGRSKAISTVPIHLSIFSPNVVNLTLIDLPGLTKVAVDGQPESIVQDIENMVRSYIEKPNCIILAISPANQDLATSDAIKISREVDPRGDRTFGVLTKIDLMGQGTDAVEILEGKSNKLR 844
            +S QNQ   M  LI ++N++Q A + LG         ++   LP IA            LE+ VGKDFLPRGSGIVTRRPL+LQL  IQ+  EYAEF+H    RF DF AVRKEI DETDR TG++K IS  PI+L +FSPNV+NLTLIDLPGLTKV V  QP  I Q I +M+ ++I +  C+ILA++PAN DLATSDA+K+++EVDP+G RT GVLTK+DLM +GTDA EILE K   LR
Sbjct:    1 MSWQNQG--MQALIPVINRVQDAFSQLGT--------SVSFELPQIAVVGGQSAGKSSVLENFVGKDFLPRGSGIVTRRPLILQL--IQDRNEYAEFLHKKGHRFVDFDAVRKEIEDETDRVTGQNKGISPHPINLRVFSPNVLNLTLIDLPGLTKVPVGDQPADIEQQIRDMILTFINRETCLILAVTPANSDLATSDALKLAKEVDPQGLRTIGVLTKLDLMDEGTDAREILENKLFTLR 230          
BLAST of DY304625 vs. ExPASy Swiss-Prot
Match: DYN1_RAT (Dynamin-1 OS=Rattus norvegicus GN=Dnm1 PE=1 SV=2)

HSP 1 Score: 236.113 bits (601), Expect = 2.239e-61
Identity = 125/233 (53.65%), Postives = 161/233 (69.10%), Query Frame = 2
Query:  146 MDNLITLVNKIQRACTALGDHGEESALPTLWDSLPSIAXXXXXXXXXXXXLESVVGKDFLPRGSGIVTRRPLVLQLHKIQEGKEYAEFMHLPRKRFNDFAAVRKEISDETDRETGRSKAISTVPIHLSIFSPNVVNLTLIDLPGLTKVAVDGQPESIVQDIENMVRSYIEKPNCIILAISPANQDLATSDAIKISREVDPRGDRTFGVLTKIDLMGQGTDAVEILEGKSNKLR 844
            M++LI LVN++Q A +A+G + +          LP IA            LE+ VG+DFLPRGSGIVTRRPLVLQL  +    EYAEF+H   K+F DF  VR EI  ETDR TG +K IS VPI+L ++SP+V+NLTL+DLPG+TKV V  QP  I   I +M+  ++ K NC+ILA+SPAN DLA SDA+KI++EVDP+G RT GV+TK+DLM +GTDA ++LE K   LR
Sbjct:    6 MEDLIPLVNRLQDAFSAIGQNADLD--------LPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQL--VNSTTEYAEFLHCKGKKFTDFEEVRLEIEAETDRVTGTNKGISPVPINLRVYSPHVLNLTLVDLPGMTKVPVGDQPPDIEFQIRDMLMQFVTKENCLILAVSPANSDLANSDALKIAKEVDPQGQRTIGVITKLDLMDEGTDARDVLENKLLPLR 228          
The following BLAST results are available for this feature:
BLAST of DY304625 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
DRP1B_ARATH1.582e-10784.32Dynamin-related protein 1B OS=Arabidopsis thaliana... [more]
DRP1A_ARATH5.090e-10683.47Dynamin-related protein 1A OS=Arabidopsis thaliana... [more]
SDL5A_SOYBN1.481e-10582.20Dynamin-related protein 5A OS=Glycine max PE=2 SV=... [more]
SDLCA_SOYBN5.628e-10582.20Dynamin-related protein 12A OS=Glycine max PE=1 SV... [more]
DRP1C_ARATH3.783e-9372.46Dynamin-related protein 1C OS=Arabidopsis thaliana... [more]
DRP1E_ARATH3.915e-9067.63Dynamin-related protein 1E OS=Arabidopsis thaliana... [more]
DRP1D_ARATH2.538e-8968.35Dynamin-related protein 1D OS=Arabidopsis thaliana... [more]
DYN_DROME3.690e-6455.79Dynamin OS=Drosophila melanogaster GN=shi PE=1 SV=... [more]
DYN1_CAEEL4.820e-6456.61Dynamin OS=Caenorhabditis elegans GN=dyn-1 PE=1 SV... [more]
DYN1_RAT2.239e-6153.65Dynamin-1 OS=Rattus norvegicus GN=Dnm1 PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionKN0AAQ9YD17RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304625 ID=DY304625; Name=DY304625; organism=Citrus clementina; type=EST; length=949bp
ATCCCTCCTCCCTCCCTTTCTTTCTCTTTCCAAAGCCAAAATTTCAAATC
AATACATCCGATAAACAACCCCCCGAGTCGACTCACTATCCGAGTCACAC
ACCACCACCACCAATCAACTCAGCGATCAGAATCAGTCCACACTCATGGA
TAATTTGATCACATTAGTGAATAAGATTCAAAGAGCGTGTACGGCCCTAG
GCGATCACGGCGAAGAAAGCGCGTTGCCCACTCTCTGGGACTCCTTACCT
TCCATCGCCGTTGTCGGTGGCCAGAGCTCTGGAAAGTCTTCAGTGTTGGA
AAGTGTTGTTGGAAAAGACTTTTTGCCTCGTGGATCAGGGATTGTTACTC
GGAGACCTCTAGTCTTGCAGCTTCATAAGATTCAAGAAGGAAAAGAATAT
GCAGAGTTTATGCATCTTCCAAGAAAGAGGTTCAATGACTTCGCTGCTGT
GAGGAAAGAGATTTCTGATGAGACTGATCGAGAGACTGGTCGTTCGAAAG
CAATCTCTACTGTTCCTATCCATTTAAGTATATTTTCTCCTAATGTTGTG
AACTTGACCCTGATTGATCTTCCTGGACTTACAAAAGTTGCTGTTGACGG
TCAACCTGAGAGCATCGTGCAAGACATCGAAAATATGGTTAGGTCCTATA
TTGAAAAGCCCAATTGTATTATTCTGGCAATTTCTCCTGCCAATCAGGAC
CTTGCAACATCAGATGCAATTAAGATCTCTCGTGAAGTTGATCCTAGAGG
GGACAGGACATTTGGTGTTCTAACAAAGATTGATCTTATGGGACAAGGTA
CCGATGCAGTTGAAATCCTTGAAGGAAAATCAAATAAGCTACGGGATCCT
TTGGATTGGTGTTGGTAATCGCCTCCCAAGCTGAAAATAACAAAAAGTGG
TGGAATGAATCGCTGCCCCGGCGGTAAAAGCATGGAATACTTTAAAAAA
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