DY304627

Overview
NameDY304627
Unique NameDY304627
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length912
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY304627 vs. ExPASy Swiss-Prot
Match: DRPE_CRAPL (Desiccation-related protein PCC13-62 OS=Craterostigma plantagineum PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 5.968e-48
Identity = 98/189 (51.85%), Postives = 121/189 (64.02%), Query Frame = 3 
Query:  177 AAAPASRGPIEANDKDLIQVALNXXXXXXXXXXNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLRAIVTTVGGFARPQIDLSRQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIPNLVNCTSRNLVAGLLGVESGQDAVIRTLLYKRADQIVVPY 743
            AA    +  I  +D  L++  LN            A G+G+D +EPE+A GGP P G  KANL      II +F YQE GH+RAI ++V GF RP +DLS ++FA + D A G  L PPFDPY+N +NYLLA YV+PYVGL GYVG  P L +  SR LVAGLL VE+GQDA+IR LLY+RA   V PY
Sbjct:   26 AAWHHEKDDIPKSDVSLLEFPLNLELLEAEFFAWAAFGKGIDELEPELAKGGPSPIGVQKANLSPFIRDIIAQFAYQEFGHVRAIQSSVEGFPRPLLDLSAKSFATVMDSAFGKTLKPPFDPYANDINYLLACYVVPYVGLTGYVGANPKLESPVSRKLVAGLLAVEAGQDAIIRALLYERATDKVEPY 214
The following BLAST results are available for this feature:
BLAST of DY304627 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
DRPE_CRAPL5.968e-4851.85Desiccation-related protein PCC13-62 OS=Craterosti... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAQ9YD19RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304627 ID=DY304627; Name=DY304627; organism=Citrus clementina; type=EST; length=912bp
ATATATATGCGGCTCCGTCATGCACGCAGCCAGCTATTGTATCTGATGAA
TAAGTTTATTAGCTGGTTTTGTTTATGAATTGCCCATAAAAAAAAAAAAT
GGCAACTCGATACTATTCTTTCGTTGTAGCTTTGCATCTTACATTAATGA
ATATTCTTTTTGGCATGGTCGTCGGTGCTGCAGCTCCAGCTTCCCGCGGA
CCAATCGAAGCCAACGATAAGGATCTTATTCAAGTAGCTCTGAATTTGGA
GTTCTTAGAAACTGAATTCTTCTTAAATGGTGCACTCGGCAGAGGACTTG
ACAGTATAGAGCCAGAGATGGCAGCGGGTGGTCCTCCTCCGACTGGCGCC
AGCAAGGCCAACCTTGACCATACTACATATCGGATCATTGAGGAATTCGG
TTATCAGGAGATTGGTCATCTCAGGGCTATCGTAACAACAGTTGGTGGAT
TTGCAAGGCCTCAGATAGATCTCAGCCGTCAAAATTTCGCCAATATATTT
GACCAAGCAGTTGGTTACAAACTCACTCCTCCATTCGACCCTTATTCCAA
CACTGTCAATTATCTCTTAGCAAGCTATGTCATCCCTTATGTGGGACTCG
TCGGTTATGTTGGCACCATTCCCAACCTTGTCAACTGCACTTCTCGTAAT
TTAGTTGCAGGGCTCTTAGGAGTGGAGTCTGGACAAGATGCAGTAATACG
GACGTTACTATACAAGAGGGCTGACCAGATTGTGGTTCCTTATAAAAATG
ACGTTACCTGAAATCATTGACCGTTTCCTCCCCCTTTAGAACCGGCTTGG
GCAGCCCGGAAACAAAAATAAGGGCCTAGGGGTGCCCCCGGAAACTTGGC
CCTGAAAACAGGAACAAAAATTAACATTCTTATCACCCAAGCCAAATTCC
CCAACCCAACTC
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