DY304630

Overview
NameDY304630
Unique NameDY304630
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length876
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY304630 vs. ExPASy Swiss-Prot
Match: THIC2_ARATH (Probable acetyl-CoA acetyltransferase, cytosolic 2 OS=Arabidopsis thaliana GN=At5g47720 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.462e-20
Identity = 37/51 (72.55%), Postives = 44/51 (86.27%), Query Frame = 3
Query:  477 VSDGAAALVLVNGVKALELGLQVIPNIKGFADAAKAPYWFTTAPSLAIPKS 629
            +SDGAAALVLV+G KALELGL VI  I+G+ADAA+AP  FTT P+LAIPK+
Sbjct:  262 ISDGAAALVLVSGEKALELGLHVIAKIRGYADAAQAPELFTTTPALAIPKA 312          

HSP 2 Score: 41.5874 bits (96), Expect = 1.462e-20
Identity = 18/27 (66.67%), Postives = 22/27 (81.48%), Query Frame = 1
Query:  613 LQYPKAMSNAGLEASQIDYYEIHETFS 693
            L  PKA+  AGL+ASQ+DYYEI+E FS
Sbjct:  307 LAIPKAIKRAGLDASQVDYYEINEAFS 333          

HSP 3 Score: 25.0238 bits (53), Expect = 1.462e-20
Identity = 13/34 (38.24%), Postives = 19/34 (55.88%), Query Frame = 2
Query:  773 SLQVLTITHQKLPGS*PEQVMPMVEPYSLGHP*G 874
            +  V+ + +QKL G  PE++       SLGHP G
Sbjct:  331 AFSVVALANQKLLGLDPERLNAHGGAVSLGHPLG 364          
BLAST of DY304630 vs. ExPASy Swiss-Prot
Match: THIC1_ARATH (Acetyl-CoA acetyltransferase, cytosolic 1 OS=Arabidopsis thaliana GN=AAT1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.138e-18
Identity = 35/51 (68.63%), Postives = 44/51 (86.27%), Query Frame = 3
Query:  477 VSDGAAALVLVNGVKALELGLQVIPNIKGFADAAKAPYWFTTAPSLAIPKS 629
            +SDGAAALVLV+G KAL+LGL V+  IKG+ DAA+ P +FTTAP+LAIPK+
Sbjct:  260 ISDGAAALVLVSGEKALQLGLLVLAKIKGYGDAAQEPEFFTTAPALAIPKA 310          

HSP 2 Score: 41.2022 bits (95), Expect = 3.138e-18
Identity = 17/27 (62.96%), Postives = 24/27 (88.89%), Query Frame = 1
Query:  613 LQYPKAMSNAGLEASQIDYYEIHETFS 693
            L  PKA+++AGLE+SQ+DYYEI+E F+
Sbjct:  305 LAIPKAIAHAGLESSQVDYYEINEAFA 331          
BLAST of DY304630 vs. ExPASy Swiss-Prot
Match: THIL_SCHPO (Acetyl-CoA acetyltransferase OS=Schizosaccharomyces pombe GN=erg10 PE=2 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 6.130e-14
Identity = 27/51 (52.94%), Postives = 39/51 (76.47%), Query Frame = 3
Query:  477 VSDGAAALVLVNGVKALELGLQVIPNIKGFADAAKAPYWFTTAPSLAIPKS 629
            ++DGA+ALVL++  K  ELGL+ +  I G+ +AA+ P  FTT+PSLAIPK+
Sbjct:  252 LNDGASALVLMSAAKVKELGLKPLAKIIGWGEAAQDPERFTTSPSLAIPKA 302          

HSP 2 Score: 42.743 bits (99), Expect = 6.130e-14
Identity = 18/27 (66.67%), Postives = 23/27 (85.19%), Query Frame = 1
Query:  613 LQYPKAMSNAGLEASQIDYYEIHETFS 693
            L  PKA+ +AG+EASQ+DYYEI+E FS
Sbjct:  297 LAIPKALKHAGIEASQVDYYEINEAFS 323          

HSP 3 Score: 20.4014 bits (41), Expect = 6.130e-14
Identity = 10/34 (29.41%), Postives = 18/34 (52.94%), Query Frame = 2
Query:  773 SLQVLTITHQKLPGS*PEQVMPMVEPYSLGHP*G 874
            +  V+ + + K+ G  PE+V       ++GHP G
Sbjct:  321 AFSVVAVANTKILGLDPERVNINGGGVAMGHPLG 354          
The following BLAST results are available for this feature:
BLAST of DY304630 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
THIC2_ARATH1.462e-2072.55Probable acetyl-CoA acetyltransferase, cytosolic 2... [more]
THIC1_ARATH3.138e-1868.63Acetyl-CoA acetyltransferase, cytosolic 1 OS=Arabi... [more]
THIL_SCHPO6.130e-1452.94Acetyl-CoA acetyltransferase OS=Schizosaccharomyce... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAQ9YD22RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304630 ID=DY304630; Name=DY304630; organism=Citrus clementina; type=EST; length=876bp
CCAGTTTTATGCTGCAAAGCTAATGAAGCTCAGACCCAGTTTTAAGGAAT
GGGGTTCTGTTACTGCTGGCAATGCTTCTATTATAAGGTCCTCTCTCTCT
CTCTCTCGTTTTTATGGAGGCAATATATAGGTTTGCTGCTGGGTGAAATC
CAGTGTATAGCCGCTTAGTGCTGTTGGTGAAATGATCAAGTTCGTGTATC
AATCACGTGACTTGAAATTGTATTCTAGTCGTGAGTTTTTGTTATTAAGA
AATTCTTGGAACAAGATCTTCAGGAATATGTTAATTTTTGCTATCTATGG
CTGCTTTTTGAATTGAACCAATTAAATTATGACAAATCTTTTCTAAGTTC
ATTATATCTATATCTGAGTCAAATATGGCAATCCCATCATAGAATCTACA
TTACATAAAAAATAGTTATTCTGTAGTTGCCAAGGGGAATTTCTTATCAG
TTTTGGGTTGTTGGTCTACTGTTGTGGTCAGTGATGGTGCAGCGGCACTT
GTACTGGTGAATGGAGTGAAGGCACTTGAGCTTGGTTTGCAAGTAATACC
TAATATTAAGGGATTTGCTGACGCCGCTAAAGCTCCATATTGGTTTACTA
CTGCACCATCCCTTGCAATACCCAAAAGCCATGAGTAATGCTGGCTTGGA
AGCTTCTCAGATTGATTACTATGAAATACACGAAACTTTTTCTGAAAAAA
TCATGTTCCAACCTACTGATGCCTCTAGAATCCAAAGGTTAAGTTTATTA
CCGTTTCATGTTTTAAACCTCTAGTTTGCAGGTTTTAACAATTACCCATC
AAAAATTGCCTGGATCTTAACCAGAACAGGTAATGCCTATGGTAGAACCG
TATTCCCTGGGTCACCCTTAAGGGTG
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