DY304631

Overview
NameDY304631
Unique NameDY304631
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length873
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY304631 vs. ExPASy Swiss-Prot
Match: DR111_ARATH (DNA-damage-repair/toleration protein DRT111, chloroplastic OS=Arabidopsis thaliana GN=DRT111 PE=2 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 1.376e-46
Identity = 110/230 (47.83%), Postives = 131/230 (56.96%), Query Frame = 1 
Query:  169 MLGGLYGDLPPPSDEDKPTNTTTTVWSSSAKMAPPTLRKPSSIFAPPQTILKPQSKPK---TTQNSLPTRXXXXXXXXXXXXXXXXXXXXXLVGVTSTVIEEYDPARPNDYEDYRREKKKKAVDA------XXXXXXXXXXXXXXXXXXXXXXXXXNASASRLNMSGEEAWKRRAAMXXXXXXXXXXXXXXXXXXXXXXXXXFTIGKSETSGLGLGAGGPMTAGPKMMAK 831
            MLGGLYGDLPPP+D++KP+  +++VWSSS KMAPPTLRKP + FAPPQTIL+P +KPK   +     P                       LVGVTS+VIEEYDPARPNDYE+Y+REKK+KA +A                               N+  SRLN+SGEEAWKRRAAM                         F+IGKSETSGLG+GAGG MTA  +MMAK
Sbjct:    1 MLGGLYGDLPPPTDDEKPSGNSSSVWSSSTKMAPPTLRKPPA-FAPPQTILRPLNKPKPIVSAPYKPPPPSNSSQSVLIPANESAPSHQPALVGVTSSVIEEYDPARPNDYEEYKREKKRKATEAEMKREMDKRRQEDEERDKREREEREKERERDNSDPSRLNISGEEAWKRRAAM-----SGGGSGGKGRSSSPPGNVDGFSIGKSETSGLGVGAGGQMTAAQRMMAK 224
The following BLAST results are available for this feature:
BLAST of DY304631 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
DR111_ARATH1.376e-4647.83DNA-damage-repair/toleration protein DRT111, chlor... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAQ9YD23RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304631 ID=DY304631; Name=DY304631; organism=Citrus clementina; type=EST; length=873bp
TTCCTTTTTCGTCTCTTCTTATTCGTAGGTAGTAGTATCTTCTTCTACCT
CAGCTCGAATCTCATCCGACAACCCAAACAACAAAACAAAATCAGCCTTT
TAATTCTCCAAAATCTAATTTCGGAATTCAAATTCCCCGGGATTTTCCAT
CAAAAGCCACGTTGCGAAATGCTAGGCGGGCTGTACGGAGACCTACCTCC
ACCCTCCGATGAGGACAAACCCACCAACACGACCACCACCGTCTGGTCAA
GCAGTGCCAAGATGGCCCCGCCGACTCTCCGAAAACCCTCGTCAATTTTC
GCGCCACCACAAACCATTCTTAAGCCCCAATCCAAACCCAAAACCACCCA
AAATTCTCTCCCGACTAGACCCCATTCCTCACCGGCAATCGCACCTTCCC
CCGACGACGCGGCAGCGCTGCCGCAACCGGCATTGGTCGGCGTCACTTCG
ACCGTCATCGAGGAGTACGACCCCGCTAGACCGAACGATTACGAAGATTA
CAGGAGAGAGAAGAAGAAGAAAGCGGTGGATGCTGAAATTAGGAGAGAAC
TGGAGAGAAGAAGGCAAGAGGAAGAGGAAAGGGAGAGGAGAGAGAGAGAA
GAGAGAGAAAATGCTTCAGCTTCGAGGCTAAATATGTCTGGGGAGGAGGC
GTGGAAGAGACGCGCGGCGATGAGCAGTGGGGGAGTGCCACCGAGGTCGC
CATCTCCTCCTCCCGTAAATGTTGAATCAGGCGGAGGGGGAGGAGGGTTT
ACTATAGGGAAGTCCGAGACTAGTGGGCTGGGACTTGGTGCGGGTGGCCC
GATGACCGCCGGCCCAAAGATGATGGCAAAATGGGGCGGGAAGGAAGGGG
AAGGGCCTGGGAAACAGAACAGG
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