DY304632

Overview
NameDY304632
Unique NameDY304632
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length873
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY304632 vs. ExPASy Swiss-Prot
Match: NEP1_NEPGR (Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 9.270e-27
Identity = 64/148 (43.24%), Postives = 85/148 (57.43%), Query Frame = 1
Query:  370 GAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCVKYCYEQKEPKFDPTVXXXXXXXXXXXTICTSLQSATGNSPACASSTCLYGIQYGDSSFSIGFFGKETLTLTPXDVFPNFLFGCGQNNRGLFRG-AAGLMGPGRDPISLVSQ 810
            G G Y++ + IGTP +  S I DTGSDL WTQC+PC + C+ Q  P F+P              +C +L     +SP C+++ C Y   YGD S + G  G ETLT     + PN  FGCG+NN+G  +G  AGL+G GR P+SL SQ
Sbjct:   91 GDGEYLMNLSIGTPAQPFSAIMDTGSDLIWTQCQPCTQ-CFNQSTPIFNPQGSSSFSTLPCSSQLCQAL-----SSPTCSNNFCQYTYGYGDGSETQGSMGTETLTFGSVSI-PNITFGCGENNQGFGQGNGAGLVGMGRGPLSLPSQ 231          
BLAST of DY304632 vs. ExPASy Swiss-Prot
Match: NEP2_NEPGR (Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.895e-25
Identity = 69/189 (36.51%), Postives = 94/189 (49.74%), Query Frame = 1
Query:  247 LRQDQSRVKSIHSRLSKNSGSLDEIRQSDDATLPAKDGSVVGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCVKYCYEQKEPKFDPTVXXXXXXXXXXXTICTSLQSATGNSPACASSTCLYGIQYGDSSFSIGFFGKETLTLTPXDVFPNFLFGCGQNNRGLFRG-AAGLMGPGRDPISLVSQ 810
            +++ + R++SI++ L  +SG    +   D              G Y++ V IGTP    S I DTGSDL WTQCEPC + C+ Q  P F+P               C  L S T     C ++ C Y   YGD S + G+   ET T     V PN  FGCG++N+G  +G  AGL+G G  P+SL SQ
Sbjct:   65 IKRGERRMRSINAMLQSSSGIETPVYAGD--------------GEYLMNVAIGTPDSSFSAIMDTGSDLIWTQCEPCTQ-CFSQPTPIFNPQDSSSFSTLPCESQYCQDLPSET-----CNNNECQYTYGYGDGSTTQGYMATETFTFETSSV-PNIAFGCGEDNQGFGQGNGAGLIGMGWGPLSLPSQ 232          
The following BLAST results are available for this feature:
BLAST of DY304632 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
NEP1_NEPGR9.270e-2743.24Aspartic proteinase nepenthesin-1 OS=Nepenthes gra... [more]
NEP2_NEPGR3.895e-2536.51Aspartic proteinase nepenthesin-2 OS=Nepenthes gra... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAQ9YD24RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304632 ID=DY304632; Name=DY304632; organism=Citrus clementina; type=EST; length=873bp
CTCTCACTAAGCCTTTGCTATGCTTTCCAAGAAAGAGTCCCCGCAGAAAG
CCAACATGAGCTTCAACATATGCATACAATTCAACTCAGCTCTCTTCTTC
CATCATCTGTTTGCAATCCTTCCACAAAAGGCAATGCGAAGAAATCATCG
TTGAAAGTCGTGCACAAGCACGGTCCATGTTTCAAGCCTTATAGTAATGG
AGAAAAAGCAGCGTCTCCATCACCATCAGTATCACATGCAGAGATCCTTC
GGCAAGACCAGTCTAGAGTTAAATCAATCCACTCAAGACTCTCTAAGAAC
TCAGGCAGCCTTGATGAGATCAGGCAGTCGGACGACGCCACGCTCCCCGC
CAAGGACGGTAGCGTCGTGGGTGCCGGCAATTACATTGTCACGGTGGGTA
TTGGTACCCCCAAGAAAGATTTATCCCTCATTTTTGACACCGGAAGTGAC
CTCACATGGACTCAATGTGAGCCTTGCGTCAAATACTGCTATGAACAAAA
GGAGCCAAAATTTGACCCCACCGTGTCCCAATCATATAGCAACGTGTCTT
GCTCGTCGACAATCTGCACTTCGCTCCAATCAGCCACAGGTAACTCACCA
GCTTGTGCATCATCCACATGCCTCTATGGGATTCAATACGGAGACTCATC
ATTCTCCATTGGCTTCTTCGGGAAAGAAACCCTAACCCTGACACCCCNGG
ACGTTTTCCCTAACTTCCTCTTCGGCTGCGGCCAAAACAACCGCGGGCTC
TTCCGCGGCGCTGCCGGTTTAATGGGTCCCGGCCGTGACCCAATCTCACT
AGTTTCCCAAACAGCCCCAAATACAAGAAACTCCTCTCATATTGCCTCCC
TTCGTCCGCCAGCTCAACCGGTC
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