DY304635

Overview
NameDY304635
Unique NameDY304635
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length959
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY304635 vs. ExPASy Swiss-Prot
Match: PLDD1_ARATH (Phospholipase D delta OS=Arabidopsis thaliana GN=PLDDELTA PE=1 SV=2)

HSP 1 Score: 222.246 bits (565), Expect = 3.396e-57
Identity = 112/199 (56.28%), Postives = 135/199 (67.84%), Query Frame = 1
Query:  331 EKVIYLHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHXXXXXXXXXXXXXDPYVTVVVPQATVARTRVLKNSQEPVWNEHFNIPLAHPLSNLEIQVKDDDVFSAQIIGTAAIPAHTIATGELISRWYHIIAPSGSPPKPGATIQLEL*FTPCDKNPLNRPAICGDPEQKELRKGVFPL 927
            E V+ LHGDLDLKI++ARRLPNMDM SEHLRR FTAC+ C  P  T +    D G                DPYVTVVVPQAT+ARTRVLKNSQEP+W+E FNI +AHP + LE QVKDDDVF AQIIGTA IP   IA+GE IS W+ ++  SG PPK    I +++ FTP D+    R  I GDPE++ +R+  FP+
Sbjct:    7 EDVMLLHGDLDLKIVKARRLPNMDMFSEHLRRLFTACNACARPTDTDDVDPRDKGEFGDKNIRSHRKVITSDPYVTVVVPQATLARTRVLKNSQEPLWDEKFNISIAHPFAYLEFQVKDDDVFGAQIIGTAKIPVRDIASGERISGWFPVLGASGKPPKAETAIFIDMKFTPFDQIHSYRCGIAGDPERRGVRRTYFPV 205          
BLAST of DY304635 vs. ExPASy Swiss-Prot
Match: PLDB1_ARATH (Phospholipase D beta 1 OS=Arabidopsis thaliana GN=PLDBETA1 PE=2 SV=3)

HSP 1 Score: 118.242 bits (295), Expect = 6.906e-26
Identity = 68/198 (34.34%), Postives = 95/198 (47.98%), Query Frame = 1
Query:  334 KVIYLHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHXXXXXXXXXXXXXDPYVTVVVPQATVARTRVLKNSQEPVWNEHFNIPLAHPLSNLEIQVKDDDVFSAQIIGTAAIPAHTIATGELISRWYHIIAPSGSPPKPGATIQLEL*FTPCDKNPLNRPAICGDPEQKELRKGVFPL 927
            KV+  HG+LD+ I  A+ LPNMDM                     H+T  D  G                DPYV+V V  A + RT V+ NS+ PVW +HF +P+AH  + +   VKD DV  +Q+IG   IP   I +G  I   Y I+  +G P KPGA + L + +TP DK  +    +   P+ + +    FPL
Sbjct:  150 KVLLSHGNLDIWIYHAKNLPNMDMF--------------------HKTLGDMFGRLPGKIEGQLTSKITSDPYVSVSVAGAVIGRTYVMSNSENPVWMQHFYVPVAHHAAEVHFVVKDSDVVGSQLIGLVTIPVEQIYSGAKIEGTYPILTSNGKPCKPGANLSLSIQYTPMDKLSVYHHGVGAGPDYQGVPGTYFPL 327          
BLAST of DY304635 vs. ExPASy Swiss-Prot
Match: PLDB2_ARATH (Phospholipase D beta 2 OS=Arabidopsis thaliana GN=PLDBETA2 PE=2 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 2.716e-22
Identity = 63/200 (31.50%), Postives = 92/200 (46.00%), Query Frame = 1
Query:  334 KVIYLHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHXXXXXXXXXXXXXDPYVTVVVPQATVARTRVLKNSQEPVWNEHFNIPLAHPLSNLEIQVKDDDVFSAQIIGTAAIPAHTIATGELISRWYHIIAPSGSPPKPGATIQLEL*FTPCDKNPLNRPAICGDPEQKELRKGVFPLAE 933
            KV+ LHG+LD+ +  A  LPN+D+                     H+T     G                DPYV++ V  A + RT V+ NS+ PVW +HF +P+AH  + +   VKD D   +Q+IG   IP   I +G  I   Y I   +G P KPGAT+ L + +T  +K  +    +   P  + +    FPL E
Sbjct:  111 KVLLLHGNLDIWVSCANNLPNLDLF--------------------HKTLGVVFGGMTNMIEGQLSKKITSDPYVSISVAGAVIGRTYVISNSENPVWQQHFYVPVAHHAAEVHFVVKDSDAVGSQLIGIVTIPVEQIYSGARIEGTYSIRDSNGKPCKPGATLSLSIQYTSMNKLSVYHSGVGAGPYYQGVPGTYFPLRE 290          
BLAST of DY304635 vs. ExPASy Swiss-Prot
Match: PLDG1_ARATH (Phospholipase D gamma 1 OS=Arabidopsis thaliana GN=PLDGAMMA1 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 6.050e-22
Identity = 62/210 (29.52%), Postives = 96/210 (45.71%), Query Frame = 1
Query:  298 RYMAAGDDSDKEKVIYLHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHXXXXXXXXXXXXXDPYVTVVVPQATVARTRVLKNSQEPVWNEHFNIPLAHPLSNLEIQVKDDDVFSAQIIGTAAIPAHTIATGELISRWYHIIAPSGSPPKPGATIQLEL*FTPCDKNPLNRPAICGDPEQKELRKGVFPL 927
            +Y+     S   +V  LHG+LD+ +  A+ LPNMD     L    +                   G+               DPYVTV +  A + RT V+ NS+ PVW +HF++P+AH  + +   VKD D+  +QI+G   IP   + +G  I   + I+  SG P K GA + L + +TP ++  L +  +    E   +    FPL
Sbjct:   24 QYVPFATSSGSLRVELLHGNLDIWVKEAKHLPNMDGFHNRLGGMLS-------------------GLGRKKVEGEKSSKITSDPYVTVSISGAVIGRTFVISNSENPVWMQHFDVPVAHSAAEVHFVVKDSDIIGSQIMGAVGIPTEQLCSGNRIEGLFPILNSSGKPCKQGAVLGLSIQYTPMERMRLYQMGVGSGNECVGVPGTYFPL 214          
BLAST of DY304635 vs. ExPASy Swiss-Prot
Match: PLDG3_ARATH (Phospholipase D gamma 3 OS=Arabidopsis thaliana GN=PLDGAMMA3 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.659e-20
Identity = 57/186 (30.65%), Postives = 86/186 (46.24%), Query Frame = 1
Query:  334 KVIYLHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDD----GVRHXXXXXXXXXXXXXDPYVTVVVPQATVARTRVLKNSQEPVWNEHFNIPLAHPLSNLEIQVKDDDVFSAQIIGTAAIPAHTIATGELISRWYHIIAPSGSPPKPGATIQLEL*FTPCDKNPLNRPAI 879
            +V  LHG+LD+ +  A+ LPNMD                      H T         G R+             DPYVTV +  A + RT V+ NS+ PVW +HF++P+AH  + +   VKD D+  +QIIG   IP   + +G  I   + I+   G P K GA + L + + P ++  L +  +
Sbjct:   40 RVELLHGNLDIWVKEAKHLPNMDGF--------------------HNTLVGGMFFGLGRRNHKVDGENSSKITSDPYVTVSISGAVIGRTFVISNSENPVWMQHFDVPVAHSAAKVHFVVKDSDIIGSQIIGAVEIPTEQLCSGNRIEGLFPILNSRGKPCKQGAVLSLSIQYIPMERMRLYQKGV 205          
BLAST of DY304635 vs. ExPASy Swiss-Prot
Match: PLDG2_ARATH (Phospholipase D gamma 2 OS=Arabidopsis thaliana GN=PLDGAMMA2 PE=1 SV=3)

HSP 1 Score: 97.0561 bits (240), Expect = 1.648e-19
Identity = 58/194 (29.90%), Postives = 90/194 (46.39%), Query Frame = 1
Query:  346 LHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHXXXXXXXXXXXXXDPYVTVVVPQATVARTRVLKNSQEPVWNEHFNIPLAHPLSNLEIQVKDDDVFSAQIIGTAAIPAHTIATGELISRWYHIIAPSGSPPKPGATIQLEL*FTPCDKNPLNRPAICGDPEQKELRKGVFPL 927
            LHG+LD+ +  A+ LPNM               +C            + G R              DPYVTV +  A + RT V+ NS+ PVW +HF++P+AH  + +   VKD+D   ++IIG   IP   + +G  I   + I+  SG P + GA + L + +TP ++  L +  +    E   +    FPL
Sbjct:   34 LHGNLDIWVKEAKHLPNM---------------ICYRNKLVGGISFSELGRRIRKVDGEKSSKFTSDPYVTVSISGAVIGRTFVISNSENPVWMQHFDVPVAHSAAEVHFVVKDNDPIGSKIIGVVGIPTKQLCSGNRIEGLFPILNSSGKPCRKGAMLSLSIQYTPMERMRLYQKGVGSGVECVGVPGTYFPL 212          
BLAST of DY304635 vs. ExPASy Swiss-Prot
Match: PLDA1_RICCO (Phospholipase D alpha 1 OS=Ricinus communis GN=PLD1 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.676e-12
Identity = 37/96 (38.54%), Postives = 54/96 (56.25%), Query Frame = 1
Query:  550 YVTVVVPQATVARTRVLKNSQE-PVWNEHFNIPLAHPLSNLEIQVKDDDVFSAQIIGTAAIPAHTIATGELISRWYHIIAPSGSPPKPGATIQLEL 834
            Y T+ + +A V RTR+L+N Q  P W E F++  AH  SN+   VKDD+   A +IG A +P   +  GE I RW  I+    +P   G+ I ++L
Sbjct:   50 YATIDLEKARVGRTRILENEQSNPRWYESFHVYCAHQASNVIFTVKDDNPIGATLIGRAYVPVEELLDGEEIDRWVEILDEDKNPVHSGSKIHVKL 145          
BLAST of DY304635 vs. ExPASy Swiss-Prot
Match: PLDA1_PIMBR (Phospholipase D alpha 1 OS=Pimpinella brachycarpa GN=PLD1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.676e-12
Identity = 34/96 (35.42%), Postives = 55/96 (57.29%), Query Frame = 1
Query:  550 YVTVVVPQATVARTRVLKNS-QEPVWNEHFNIPLAHPLSNLEIQVKDDDVFSAQIIGTAAIPAHTIATGELISRWYHIIAPSGSPPKPGATIQLEL 834
            Y ++ + +A V RTR+++N    P WNE F+I   HP +N+   VKDD+   A +IG A +P H +  GE + +W  I+    +P   G+ I ++L
Sbjct:   50 YASIDLDKARVGRTRMIENEPNNPKWNESFHIYCGHPSTNVIFTVKDDNPIGATLIGRAYLPVHELLEGEEVDKWVEILDEDKNPISEGSKIHVKL 145          
BLAST of DY304635 vs. ExPASy Swiss-Prot
Match: PLDA1_TOBAC (Phospholipase D alpha 1 OS=Nicotiana tabacum GN=PLD1 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 2.157e-11
Identity = 39/105 (37.14%), Postives = 56/105 (53.33%), Query Frame = 1
Query:  550 YVTVVVPQATVARTRVLKNS-QEPVWNEHFNIPLAHPLSNLEIQVKDDDVFSAQIIGTAAIPAHTIATGELISRWYHIIAPSGSPPKPGATIQLEL*FTPCDKNP 861
            Y TV + +A V RTR +KN    P W E F+I  AH  SN+   VKDD+   A +IG A +P   +  GE I +W  I+    +P   G+ I ++L F    ++P
Sbjct:   50 YATVDLEKARVGRTRKIKNEPNNPRWYESFHIYCAHMASNVIFTVKDDNPIGATLIGRAYVPVEELLEGEEIDKWVEILDREMNPIAEGSKIHVKLQFFDVSRDP 154          
The following BLAST results are available for this feature:
BLAST of DY304635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
PLDD1_ARATH3.396e-5756.28Phospholipase D delta OS=Arabidopsis thaliana GN=P... [more]
PLDB1_ARATH6.906e-2634.34Phospholipase D beta 1 OS=Arabidopsis thaliana GN=... [more]
PLDB2_ARATH2.716e-2231.50Phospholipase D beta 2 OS=Arabidopsis thaliana GN=... [more]
PLDG1_ARATH6.050e-2229.52Phospholipase D gamma 1 OS=Arabidopsis thaliana GN... [more]
PLDG3_ARATH9.659e-2030.65Phospholipase D gamma 3 OS=Arabidopsis thaliana GN... [more]
PLDG2_ARATH1.648e-1929.90Phospholipase D gamma 2 OS=Arabidopsis thaliana GN... [more]
PLDA1_RICCO5.676e-1238.54Phospholipase D alpha 1 OS=Ricinus communis GN=PLD... [more]
PLDA1_PIMBR5.676e-1235.42Phospholipase D alpha 1 OS=Pimpinella brachycarpa ... [more]
PLDA1_TOBAC2.157e-1137.14Phospholipase D alpha 1 OS=Nicotiana tabacum GN=PL... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAQ9YE03RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304635 ID=DY304635; Name=DY304635; organism=Citrus clementina; type=EST; length=959bp
CGAGAACCTGGCATTTTTAAGTCAAAAATTTAATATACAAAAATTTTGAA
TAAAAAAAATTATTACTGTTACACCCTACGACAGTCAATAAGGCCCCCCG
TCTCGCGCCACGAGGCCTTAACTCTCAACTACAAGTAAAGCCACATCTTA
CCCAACACTCAACAGACTACAACGCCTCACTGCACGTCGTTTTCGTCTAT
CTTATCTGCTAATCGTTCCATTCTATTATTGATTTCTTTCTCCACTGTCA
TTATTATTTGCACATTTGAAGCTTCTAATCGATCCTTGATTCGCGTACGG
TACATGGCGGCCGGAGACGATTCCGATAAAGAAAAGGTCATCTACCTTCA
CGGTGACCTGGACTTGAAAATCATTCGAGCCCGGCGGTTACCTAACATGG
ACATGATGTCCGAACACCTCCGACGTTGTTTCACAGCCTGTGACGTTTGC
AAAACTCCCGCCCCGACGCACGAGACCTTTCAGGACGATGACGGAGTCCG
GCACACCACCAAAATCATCCGCAAGAGTAAGATCATCACCAGTGACCCTT
ACGTCACCGTCGTGGTCCCTCAAGCCACCGTCGCCCGTACACGTGTCCTT
AAAAATTCCCAAGAGCCTGTCTGGAACGAGCACTTCAACATTCCCTTAGC
GCATCCCCTTTCCAACCTCGAGATTCAGGTCAAAGATGACGACGTCTTCA
GCGCCCAAATCATCGGCACCGCCGCAATCCCTGCTCACACCATCGCGACC
GGCGAGCTCATCTCGAGATGGTACCACATCATTGCCCCTTCCGGTAGTCC
ACCTAAGCCTGGTGCAACTATACAACTCGAGCTTTAATTCACCCCCTGTG
ACAAAAATCCGCTGAATCGCCCGGCCATTTGCGGCGATCCTGAACAAAAG
GAATTGAGGAAAGGCGTATTTCCCCTTGCGGAAAAGGCTCCCCCGTGAAA
CTCTATCAA
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