DY304642
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY304642 vs. ExPASy Swiss-Prot
Match: KDTA_ECOLI (3-deoxy-D-manno-octulosonic-acid transferase OS=Escherichia coli (strain K12) GN=waaA PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 2.315e-32 Identity = 98/285 (34.39%), Postives = 144/285 (50.53%), Query Frame = 3 Query: 33 LYRALTYGVSPLVYLHLRWRKIRGREHPL---RWPERLGRPSVSRPPGPLIWFHAVSLGEGMAAIPVIKHCRRLRPDLHILMTTTTYSAFEVIKNRLPSGVIYQFCPLDIPVAVDAFLGYWKPSAIVIIEGELWPNLIMGASKHGIALGLLNARVSTKSFKQWS--GPLFRPXXXXXXXXXXXXAPLSTLQAIRFQLLEASPFTINFSGDLKYVHEYDESEGDIGSIEDLKASLA--------HQQVWMASSIHRGEEKVM*TVHKVLMQKNPNLVTIIVPRLPQ 848 LY AL Y + PL+++ L W +RGR+ P RW ER G PG ++ H+VS+GE +AAIP+++ R PDL I +TT T + E +++ V + + P D+P A++ FL P ++I+E ELWPNLI K I L + NAR+S +S ++ G R A + RF L A + +G LK+ DI L A H+ VW+A+S H GEE V+ H+ L+Q+ PNL+ I+VPR P+ Sbjct: 5 LYTALLYLIQPLIWIRL-W--VRGRKAPAYRKRWGERYGFYRHPLKPGGIM-LHSVSVGETLAAIPLVRALRHRYPDLPITVTTMTPTGSERVQSAFGKDVQHVYLPYDLPDALNRFLNKVDPKLVLIMETELWPNLIAALHKRKIPLVIANARLSARSAAGYAKLGKFVR----RLLRRITLIAAQNEEDGARFVALGAKNNQVTVTGSLKF---------DISVTPQLAAKAVTLRRQWAPHRPVWIATSTHEGEESVVIAAHQALLQQFPNLLLILVPRHPE 272
BLAST of DY304642 vs. ExPASy Swiss-Prot
Match: KDTA_ECOL6 (3-deoxy-D-manno-octulosonic-acid transferase OS=Escherichia coli O6 GN=waaA PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 2.315e-32 Identity = 98/285 (34.39%), Postives = 144/285 (50.53%), Query Frame = 3 Query: 33 LYRALTYGVSPLVYLHLRWRKIRGREHPL---RWPERLGRPSVSRPPGPLIWFHAVSLGEGMAAIPVIKHCRRLRPDLHILMTTTTYSAFEVIKNRLPSGVIYQFCPLDIPVAVDAFLGYWKPSAIVIIEGELWPNLIMGASKHGIALGLLNARVSTKSFKQWS--GPLFRPXXXXXXXXXXXXAPLSTLQAIRFQLLEASPFTINFSGDLKYVHEYDESEGDIGSIEDLKASLA--------HQQVWMASSIHRGEEKVM*TVHKVLMQKNPNLVTIIVPRLPQ 848 LY AL Y + PL+++ L W +RGR+ P RW ER G PG ++ H+VS+GE +AAIP+++ R PDL I +TT T + E +++ V + + P D+P A++ FL P ++I+E ELWPNLI K I L + NAR+S +S ++ G R A + RF L A + +G LK+ DI L A H+ VW+A+S H GEE V+ H+ L+Q+ PNL+ I+VPR P+ Sbjct: 5 LYTALLYLIQPLIWIRL-W--VRGRKAPAYRKRWGERYGFYRHPLKPGGIM-LHSVSVGETLAAIPLVRALRHRYPDLPITVTTMTPTGSERVQSAFGKDVQHVYLPYDLPDALNRFLNKVDPKLVLIMETELWPNLIAALHKRKIPLVIANARLSARSAAGYAKLGKFVR----RLLRRITLIAAQNEEDGARFVALGAKNNQVTVTGSLKF---------DISVTPQLAAKAVTLRRQWAPHRPVWIATSTHEGEESVVIAAHQALLQQFPNLLLILVPRHPE 272
BLAST of DY304642 vs. ExPASy Swiss-Prot
Match: KDTA_ECO57 (3-deoxy-D-manno-octulosonic-acid transferase OS=Escherichia coli O157:H7 GN=waaA PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 2.315e-32 Identity = 98/285 (34.39%), Postives = 144/285 (50.53%), Query Frame = 3 Query: 33 LYRALTYGVSPLVYLHLRWRKIRGREHPL---RWPERLGRPSVSRPPGPLIWFHAVSLGEGMAAIPVIKHCRRLRPDLHILMTTTTYSAFEVIKNRLPSGVIYQFCPLDIPVAVDAFLGYWKPSAIVIIEGELWPNLIMGASKHGIALGLLNARVSTKSFKQWS--GPLFRPXXXXXXXXXXXXAPLSTLQAIRFQLLEASPFTINFSGDLKYVHEYDESEGDIGSIEDLKASLA--------HQQVWMASSIHRGEEKVM*TVHKVLMQKNPNLVTIIVPRLPQ 848 LY AL Y + PL+++ L W +RGR+ P RW ER G PG ++ H+VS+GE +AAIP+++ R PDL I +TT T + E +++ V + + P D+P A++ FL P ++I+E ELWPNLI K I L + NAR+S +S ++ G R A + RF L A + +G LK+ DI L A H+ VW+A+S H GEE V+ H+ L+Q+ PNL+ I+VPR P+ Sbjct: 5 LYTALLYLIQPLIWIRL-W--VRGRKAPAYRKRWGERYGFYRHPLKPGGIM-LHSVSVGETLAAIPLVRALRHRYPDLPITVTTMTPTGSERVQSAFGKDVQHVYLPYDLPDALNRFLNKVDPKLVLIMETELWPNLIAALHKRKIPLVIANARLSARSAAGYAKLGKFVR----RLLRRITLIAAQNEEDGARFVALGAKNNQVTVTGSLKF---------DISVTPQLAAKAVTLRRQWAPHRPVWIATSTHEGEESVVIAAHQALLQQFPNLLLILVPRHPE 272
BLAST of DY304642 vs. ExPASy Swiss-Prot
Match: KDTA_HAEIN (3-deoxy-D-manno-octulosonic-acid transferase OS=Haemophilus influenzae GN=waaA PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 6.525e-27 Identity = 79/286 (27.62%), Postives = 138/286 (48.25%), Query Frame = 3 Query: 36 YRALTYGVSPLVYLHLRWRKIRGREHPLRWPERLG-RPSVSRPPGPLIWFHAVSLGEGMAAIPVIKHCRRLRPDLHILMTTTTYSAFEVIKNRLPSGVIYQFCPLDIPVAVDAFLGYWKPSAIVIIEGELWPNLIMGASKHGIALGLLNARVSTKSFKQWSGPLFRPXXXXXXXXXXXXAPLSTLQAIRFQLLEASPFTINFSGDLKY-VHEYDESEGDIGSIEDLKASLAHQQVWMASSIHRGEEKVM*TVHKVLMQKNPNLVTIIVPRLPQHGKGNCSMAKLQK 887 Y +L PL+ + ++ + R ER G + S PP I+ HA S+GE +AA P+++ ++ P L I TT T + E +K V + + PLD+P ++ F+ + +P +++E ELWPNLI I + NAR+S +S ++ + A + R+ L +N +G++KY ++ DE I S+ L + +W+A+S H GE++++ H+ L+ K PNL+ ++VPR P+ + K +K Sbjct: 6 YTSLLLICQPLILCFIGLLSVKSPRYRQRLAERYGFYGNASCPPPQGIFIHAASVGEVIAATPLVRQLQQDYPHLSITFTTFTPTGSERVKATFGDSVFHYYLPLDLPFSIHRFINFVQPKLCIVMETELWPNLIHQLFLRNIPFVIANARLSARSAHRYG--KIKAHLQTMWSQISLIAAQDNISGKRYATLGYPKEKLNITGNIKYDLNTNDELLRKIDSLRTLWKQ--DRPIWIAASTHNGEDEIILKSHRALLAKYPNLLLLLVPRHPERFNVVADLLKKEK 287
BLAST of DY304642 vs. ExPASy Swiss-Prot
Match: KDTA_RICBR (3-deoxy-D-manno-octulosonic-acid transferase OS=Rickettsia bellii (strain RML369-C) GN=waaA PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.192e-20 Identity = 81/284 (28.52%), Postives = 139/284 (48.94%), Query Frame = 3 Query: 30 KLYRALTYGVSPLVYLHLRWRKIRGREHPLRWPERLGRPSVSRPPGPLIWFHAVSLGEGMAAIPVIKHCRRLRPDLHILMTTTTYSAFEVIKNRLPSGVIYQFCPLDIPVAVDAFLGYWKPSAIVIIEGELWPNLIMGASKHGIALGLLNARVSTKSFKQWSGPLFRPXXXXXXXXXXXXAPLSTLQAIRFQLLEASPFTINFSGDLKYVHEYDESEGDIGSIEDLKAS--LAHQQVWMASSIHRGEEKVM*TVHKVLMQKNPNLVTIIVPRLPQHGKG---NC 866 +LY L++ + P+ ++ + R + G+E R ER + LIW HA S+GE M A+ ++ + + P++ L+T+ T S+ +++ +LP +Q P+D + FL WKP + IE ELWP I A+K L L+NAR+S KSF+ W + S +F L S T N G++K+ +E + + E +K S L ++QV + +S H +E+++ + K L ++ + I++PR P+ K NC Sbjct: 3 RLYYFLSFLLLPIYFVIIFIRLLIGKEDIRRVKERFAIGKHRQDNRFLIWIHAASVGESMIALNLVDNISKHFPEVRFLVTSWTQSSAKILSTKLPKIATHQLLPIDNIIFTKIFLNNWKPDLGIFIESELWPGTINEAAKQ-CNLLLVNARMSDKSFESWKKR--KGFFQLIVKNFSEVIVQSERDLQKFNELGISN-TTNL-GNIKFANE----KLPVNQEELIKLSEHLKNKQVILFASTHPEDEEIILPIIKNLKKQVIDCYIILIPRHPERIKSILDNC 277
BLAST of DY304642 vs. ExPASy Swiss-Prot
Match: KDTA_RICFE (3-deoxy-D-manno-octulosonic-acid transferase OS=Rickettsia felis GN=waaA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 2.033e-20 Identity = 74/241 (30.71%), Postives = 125/241 (51.87%), Query Frame = 3 Query: 171 LIWFHAVSLGEGMAAIPVIKHCRRLRPDLHILMTTTTYSAFEVIKNRLPSGVIYQFCPLDIPVAVDAFLGYWKPSAIVIIEGELWPNLIMGASKHGIALGLLNARVSTKSFKQWSGPLFRPXXXXXXXXXXXXAPLSTLQAI-RFQLLEASPFTINFSGDLKYVHEYDESEGDIGSIEDLKASLAHQQVWMASSIHRGEEKVM*TVHKVLMQKNPNLVTIIVPRLPQHGKG---NCSMAKL 881 LIW HA S+GE MAA+ +I + + PD+ L+T+ T S+ +++ +LP ++QF P+D + FL W+P+ + IE ELWP I ++ L L+NAR+S KSFK W L R + + + + +F L S IN G++K+ +E + + + L + L ++QV + +S H +E+V+ + K L ++ + I++PR P+ K NC L Sbjct: 97 LIWIHAASVGESMAALTLISNISKRYPDIRFLVTSWTNSSAKILTAKLPKIAVHQFLPIDNIIFTRKFLKNWQPNLGIFIESELWPCTINEGARQ-CKLLLVNARISDKSFKAW---LKRKSFFQLILKNFSKIIVQSERDLQKFNELGISD-AINL-GNIKFANE--KLPVNQEELSKLSSHLDNRQVVVFASTHPEDEEVILPIIKNLKEQFLDCYIILIPRHPERVKSIIDNCKSHNL 329
BLAST of DY304642 vs. ExPASy Swiss-Prot
Match: KDTA_RICTY (3-deoxy-D-manno-octulosonic-acid transferase OS=Rickettsia typhi GN=waaA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 2.248e-19 Identity = 69/240 (28.75%), Postives = 119/240 (49.58%), Query Frame = 3 Query: 171 LIWFHAVSLGEGMAAIPVIKHCRRLRPDLHILMTTTTYSAFEVIKNRLPSGVIYQFCPLDIPVAVDAFLGYWKPSAIVIIEGELWPNLIMGASKHGIALGLLNARVSTKSFKQWSGPLFRPXXXXXXXXXXXXAPLSTLQAIRFQLLEASPFTINFSGDLKYVHEYDESEGDIGSIEDLKASLAHQQVWMASSIHRGEEKVM*TVHKVLMQKNPNLVTIIVPRLPQHGK---GNCSMAKL 881 L+W HA S+GE M ++ +I + +L P++ L+T+ T ++ +++ +LP +QF P+D + FL WKP + IE ELWP +I +KH L L+NAR+S KSFK W + S +F L S +N G++K+ +E + + + L L +++V + +S H +E+V+ + L ++ + I++PR P+ K NC L Sbjct: 94 LVWIHAASVGEVMTSLTLIHNICKLAPNVRFLITSWTNTSAKILSTKLPKIATHQFLPIDNVIFTRKFLSNWKPDLGIFIESELWPCIINEGAKH-CKLLLVNARISNKSFKTWLKR--KKFFQLIIKNFSKIIVQSECDLQKFNALGISD-AMNL-GNIKFANE--KLLVNQEKLSKLSLHLDNRRVVVFASTHPEDEEVILPIINNLKEQFVDCYIILIPRHPERVKSILNNCKCHNL 326
BLAST of DY304642 vs. ExPASy Swiss-Prot
Match: KDTA_RICCN (3-deoxy-D-manno-octulosonic-acid transferase OS=Rickettsia conorii GN=waaA PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 8.541e-19 Identity = 71/255 (27.84%), Postives = 118/255 (46.27%), Query Frame = 3 Query: 171 LIWFHAVSLGEGMAAIPVIKHCRRLRPDLHILMTTTTYSAFEVIKNRLPSGVIYQFCPLDIPVAVDAFLGYWKPSAIVIIEGELWPNLIMGASKHGIALGLLNARVSTKSFKQWSGPLFRPXXXXXXXXXXXXAPLSTLQAIRFQLLEASPFTINFSGDLKYVHEYDESEG-DIGSIE--------------DLKASLAHQQVWMASSIHRGEEKVM*TVHKVLMQKNPNLVTIIVPRLPQHGKG---NCSMAKL 881 LIW +A S+GE M A+ +I + + PD+ L+T+ T S+ +++ +LP ++QF P+D + FL W+P + IE ELWP I +K L L+NAR+S KSFK W L + L S + DL+ +E S+ ++G+I+ L L +++V + +S H +E+V+ + K L ++ + I++PR P+ K NC L Sbjct: 97 LIWINAASIGESMVALTLIHNISKRYPDVRFLVTSWTNSSAKILTAKLPKIAVHQFLPIDNIIFTRKFLRNWQPDLGIFIESELWPCTINEGAKQ-CKLLLVNARISDKSFKAW---------------------LQRKSFFQLILKNCSKIIVQSERDLQKFNELGVSDAVNLGNIKFANEKLPVNQEELSKLSLHLDNKRVVLFASTHPEDEEVILPIIKNLKEQFLDCYIILIPRHPERVKSIIDNCKSHNL 329
BLAST of DY304642 vs. ExPASy Swiss-Prot
Match: KDTA_RICPR (3-deoxy-D-manno-octulosonic-acid transferase OS=Rickettsia prowazekii GN=waaA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 4.239e-18 Identity = 68/238 (28.57%), Postives = 122/238 (51.26%), Query Frame = 3 Query: 171 LIWFHAVSLGEGMAAIPVIKHCRRLRPDLHILMTTTTYSAFEVIKNRLPSGVIYQFCPLDIPVAVDAFLGYWKPSAIVIIEGELWPNLIMGASKHGIALGLLNARVSTKSFKQWSGPLFRPXXXXXXXXXXXXAPLSTLQAI-RFQLLEASPFTINFSGDLKYVHEYDESEGDIGSIEDLKASLAHQQVWMASSIHRGEEKVM*TVHKVLMQKNPNLVTIIVPRLPQHGKGNCSMAKL 881 L+W HA S+GE M A+ +I + +L P++ L+T+ T ++ +++ +LP +QF P+D + FL W+P + IE ELWP I +K+ L L+NAR+S KSFK W L R + + + + +F L S +N G++K+ +E + + + L L +++V + +S H +E+V+ + L ++ + I++PR P+ K + KL Sbjct: 92 LVWIHAASVGEVMTALTLIHNISKLAPNVRFLITSWTNASAKILSTKLPKIATHQFLPIDNVIFTRKFLRNWQPDLGIFIESELWPCTINEGAKY-CKLLLINARISNKSFKAW---LKRKRFFQLIIKNFSKIIVQSERDLQKFNALGISD-AMNL-GNIKFANE--KLLVNQEKLSKLILHLDNRRVLVFASTHPEDEEVILPIINNLKEQFIDCYIILIPRHPERIKSIINNCKL 321
BLAST of DY304642 vs. ExPASy Swiss-Prot
Match: KDTA_CHLPN (3-deoxy-D-manno-octulosonic-acid transferase OS=Chlamydia pneumoniae GN=waaA PE=3 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 6.555e-11 Identity = 45/161 (27.95%), Postives = 72/161 (44.72%), Query Frame = 3 Query: 33 LYRALTYGVSPLVYLHLRWRKIRGREHPLRWPERLGRPSVSRPPGPLIWFHAVSLGEGMAAIPVIKHCRRLRPDLHILMTTTTYSAFEVIKNR-LPSGVIYQFCPLDIPVAVDAFLGYWKPSAIVIIEGELWPNLIMGASKHGIALGLLNARVSTKSFKQW 512 LY+ L YG +++K L+ P G GPL+WFH S+GE +PV++ P L+T+ T +V +P G PLD + + + + +PS +V EG+ W N I A + G ++N R+S S K++ Sbjct: 30 LYKMLVYG---------KYKKSLAVRFGLKKPHVPGE-------GPLVWFHGASVGEVRLLLPVLEKFCEEFPGWRCLVTSCTELGVQVASQVFIPMGATVSILPLDFSIIIKSVVAKLRPSLVVFSEGDCWLNFIEEAKRIGATTLVINGRISIDSSKRF 174 The following BLAST results are available for this feature:
BLAST of DY304642 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY304642 ID=DY304642; Name=DY304642; organism=Citrus clementina; type=EST; length=987bpback to top |