DY304646
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY304646 vs. ExPASy Swiss-Prot
Match: PTN20_MOUSE (Tyrosine-protein phosphatase non-receptor type 20 OS=Mus musculus GN=Ptpn20 PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 3.200e-18 Identity = 70/206 (33.98%), Postives = 106/206 (51.46%), Query Frame = 1 Query: 271 LQNKSR-EISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAE-DGPREFGNICIVTKWIKTTE--TALVMRNLEVNYKKSEEPPMVCFAHSVP*RA*PWSSPGHSWLFVKFVK 876 LQ K +I +EF L+ + P + G T+ N KNRY DILP+D RV L + KDY INAS I + E+ +IATQGPLP T EDFW+MV++ +C VI M+TR ++ ++KC Y+ P EF + + + T+ T V + ++ + KS+ C H + +P + F+K+V+ Sbjct: 157 LQKKEELDIIREFLELEQMTL-PDDFNSGNTLQ----NRDKNRYRDILPYDSTRVPLGKNKDY-------INASYIRIVNHEEEYFYIATQGPLPETIEDFWQMVLENNCNVIAMITREIE-CGVIKCYSYWPISLKEPLEFEHFSVFLETFHVTQYFTVRVFQIVKKSTGKSQ-----CVKHLQFTKWPDHGTPASADFFIKYVR 344
BLAST of DY304646 vs. ExPASy Swiss-Prot
Match: PTN20_RAT (Tyrosine-protein phosphatase non-receptor type 20 OS=Rattus norvegicus GN=Ptpn20 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 4.179e-18 Identity = 76/228 (33.33%), Postives = 111/228 (48.68%), Query Frame = 1 Query: 271 LQNKSR-EISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAE-DGPREFGNICIVTKWIKTTETALVMRNLEVNYKKSEEPPMVCFAHSVP*RA*PWSSPGHSWLFVKFVKEF*ILPPQFWPNSGGIAMAGFWEK 948 LQ K +I +EF L+ I P + G + N KNRY DILP+D RV L + KDY INAS I + E+ +IATQGPLP T EDFW+MV++ +C VI M+TR ++ ++KC Y+ P EF + ++ + + T+ V+R ++ KKS + HS ++F+K WP+ G A A F+ K Sbjct: 152 LQKKEELDIIREFLELE-EMIPPDDFKSGYELQ----NRDKNRYRDILPYDSTRVPLGKNKDY-------INASYIRIVNHEEEYFYIATQGPLPDTIEDFWQMVLENNCNVIAMITREIEG-GVIKCCSYWPVSLKEPLEFKHFHVLLENFQITQ-YFVIRIFQI-VKKS-------------------TGKSHSVKHLQFIK---------WPDHGTPASADFFIK 336
BLAST of DY304646 vs. ExPASy Swiss-Prot
Match: PTN4_HUMAN (Tyrosine-protein phosphatase non-receptor type 4 OS=Homo sapiens GN=PTPN4 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.432e-18 Identity = 57/140 (40.71%), Postives = 81/140 (57.86%), Query Frame = 1 Query: 379 NLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNICI-VTKWIKTTETALVMRNLEV-NYKKSEEPPM 792 N+SKNRY DI P+D RV+LK +DY A YIN + S+S ++Q+IA QGPLPHT DFW+M + ++VMLT V+ + VKC Y+ G +G C VT + TA + R + + N +K+E P+ Sbjct: 679 NISKNRYRDISPYDATRVILKGNEDYINA--NYINMEIPSSSI---INQYIACQGPLPHTCTDFWQMTWEQGSSMVVMLTTQVERGR-VKCHQYWPEPTGSSSYG--CYQVTCHSEEGNTAYIFRKMTLFNQEKNESRPL 810 HSP 2 Score: 23.0978 bits (48), Expect = 4.432e-18 Identity = 11/24 (45.83%), Postives = 13/24 (54.17%), Query Frame = 2 Query: 779 KNHLWSVLHIQYPEGPDPGVPRDT 850 KN + IQY PD GVP D+ Sbjct: 804 KNESRPLTQIQYIAWPDHGVPDDS 827
BLAST of DY304646 vs. ExPASy Swiss-Prot
Match: PTPRN_MOUSE (Receptor-type tyrosine-protein phosphatase-like N OS=Mus musculus GN=Ptprn PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 4.620e-17 Identity = 55/141 (39.01%), Postives = 84/141 (59.57%), Query Frame = 1 Query: 250 LSFFKEKLQNKSREISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAE 672 L++ ++ L+N+ R +++E+ L A + +P+ C A D N+ KNR+ D LP+D R+ LK + P+ YINAS I ++ +IATQGPL HT DFW+MV + C VIVMLT LV++ + +C Y+ E Sbjct: 696 LAYMEDHLRNRDR-LAKEWQALCAYQAEPNT----CAAAQDESNIKKNRHPDFLPYDHARIKLKV--ESSPSRSDYINASPI-IEHDPRMPAYIATQGPLSHTIADFWQMVWESGCTVIVMLTPLVED-GVKQCDRYWPDE 827
BLAST of DY304646 vs. ExPASy Swiss-Prot
Match: PTP1_DICDI (Tyrosine-protein phosphatase 1 OS=Dictyostelium discoideum GN=ptpA1-1 PE=2 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 4.620e-17 Identity = 77/245 (31.43%), Postives = 120/245 (48.98%), Query Frame = 1 Query: 97 RPRCRRKSAMAASSAGNHSTPHNTKPFEFSAVDFPPRISLTADQYNHCS------EALSFFKEKLQNKSR---EISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREF-----GNICIVT------KWIKTTETALVMRNLEVNYK 771 RP R ++ + S+ +HS+ S P ++ YN+ S E + L+N + +I +EF L+ S + PSE + G N SKNRYT+ILP + RV LK+ +D + YINA+ I + + QFI TQGPLP+T DFW MV + C +IVML+R +N + +KC Y+ + G +F GN T + I+ E ++ RN+ + ++ Sbjct: 27 RPLPTRSNSSISLSSSSHSSFSRMG----SLGSLPTNSGSSSPYYNNSSFDLVDEERIKSSIYNLKNHIKCIHKIKEEFRLLEES-VGPSETSEGDKKH----NTSKNRYTNILPVNHTRVQLKKIQDKEGS--DYINANYIDGAYPK---QFICTQGPLPNTIADFWRMVWENRCRIIVMLSRESENCR-IKCDRYWPEQIGGEQFSIYGNGNEVFGTYSVELVEVIQDPEREIITRNIRLTFE 256
BLAST of DY304646 vs. ExPASy Swiss-Prot
Match: PTP1_CAEEL (Tyrosine-protein phosphatase 1 OS=Caenorhabditis elegans GN=ptp-1 PE=2 SV=3) HSP 1 Score: 88.1965 bits (217), Expect = 7.881e-17 Identity = 75/237 (31.65%), Postives = 109/237 (45.99%), Query Frame = 1 Query: 199 PPRISLTADQYNHCSEALSFFKEKLQNKSREISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTS--SSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNICIVTKWIKTTETA-LVMRNLEVNYKKSEEPPMVCFA-------HSVP*RA*PWSSPGHSWLFVKFVKE 879 P R++ + + S++L + L S ++ F L R KP C + NL+KNRY D+ P+D RV L+ + YINA+ ++ SS V+++IA QGPL HT DFW MV + HC IVMLT + + + VKC Y+ +E+G + I K IK +T R + + S E V H VP P H F++FV E Sbjct: 724 PARVADSVPNSDKLSKSLQLLADSLN--SGKVVDHFEMLY--RKKPGMSMNICRLT---ANLAKNRYRDVCPYDDTRVTLQASP-----SGDYINANYVNMEIPSSGIVNRYIACQGPLAHTSSDFWVMVWEQHCTTIVMLTTITERGR-VKCHQYWPRVFETQEYGRLMI--KCIKDKQTTNCCYREFSIRDRNSSEERRVTQMQYIAWPDHGVP------DDPKH---FIQFVDE 936
BLAST of DY304646 vs. ExPASy Swiss-Prot
Match: CD45_HUMAN (Leukocyte common antigen OS=Homo sapiens GN=PTPRC PE=1 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 7.887e-17 Identity = 60/182 (32.97%), Postives = 89/182 (48.90%), Query Frame = 1 Query: 235 HCSEALSFFKEKLQNKSREISQEFARLQASRIK-PSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQA-EDGPREFGNICIVTKWIKTTETALVMRNLEVNYKK 774 H L +K K+ ++ R EF + K P + AR N +KNRY DILP+D NRV L + A YINAS I + ++IA QGP T +DFW M+ + VIVM+TR + + KC +Y+ + E+G R FG++ + K ++ + VN K+ Sbjct: 632 HADILLETYKRKIADEGRLFLAEFQSIPRVFSKFPIKEAR------KPFNQNKNRYVDILPYDYNRVELSEING--DAGSNYINASYIDGFKEPR--KYIAAQGPRDETVDDFWRMIWEQKATVIVMVTRCEEGNRN-KCAEYWPSMEEGTRAFGDVVVKINQHKRCPDYIIQKLNIVNKKE 802 HSP 2 Score: 25.409 bits (54), Expect = 7.887e-17 Identity = 10/17 (58.82%), Postives = 11/17 (64.71%), Query Frame = 2 Query: 797 VLHIQYPEGPDPGVPRD 847 V HIQ+ PD GVP D Sbjct: 809 VTHIQFTSWPDHGVPED 825
BLAST of DY304646 vs. ExPASy Swiss-Prot
Match: PTN4_MOUSE (Tyrosine-protein phosphatase non-receptor type 4 OS=Mus musculus GN=Ptpn4 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.744e-16 Identity = 46/105 (43.81%), Postives = 65/105 (61.90%), Query Frame = 1 Query: 379 NLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFG 693 N+SKNRY DI P+D RV+LK +DY A YIN + S+S ++Q+IA QGPLPHT +DFW+M+ + ++VMLT V+ + VKC Y+ +G Sbjct: 679 NISKNRYRDISPYDATRVLLKGNEDYINA--NYINMEIPSSSI---INQYIACQGPLPHTCKDFWQMIWEQGSSMVVMLTTQVERGR-VKCHQYWPEPSESSSYG 777 HSP 2 Score: 24.2534 bits (51), Expect = 1.744e-16 Identity = 11/24 (45.83%), Postives = 13/24 (54.17%), Query Frame = 2 Query: 779 KNHLWSVLHIQYPEGPDPGVPRDT 850 KN + IQY PD GVP D+ Sbjct: 804 KNESRQLTQIQYTAWPDHGVPDDS 827
BLAST of DY304646 vs. ExPASy Swiss-Prot
Match: PTN18_HUMAN (Tyrosine-protein phosphatase non-receptor type 18 OS=Homo sapiens GN=PTPN18 PE=1 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 2.293e-16 Identity = 56/163 (34.36%), Postives = 82/163 (50.31%), Query Frame = 1 Query: 379 NLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNICIVTKWIKTTETALVMRNLEVNYKKSEEPPMVCFAHSVP*RA*PWSSPGHSWLFVK 867 N+ KNRY D+LP+D+ RV+L ++ YIN + I +IATQGPLPHT DFW +V ++ VI+M R ++N + +C Y+ E P + G CI K +++R L+V ++K S P R P SSP H V+ Sbjct: 56 NVRKNRYKDVLPYDQTRVILSLLQE--EGHSDYINGNFIRGVDGSLA--YIATQGPLPHTLLDFWRLVWEFGVKVILMACREIENGRK-RCERYWAQEQEPLQTGLFCITLIKEKWLNEDIMLRTLKVTFQKESRSVYQLQYMSWPDRGVP-SSPDHMLAMVE 212
BLAST of DY304646 vs. ExPASy Swiss-Prot
Match: PTPRN_RAT (Receptor-type tyrosine-protein phosphatase-like N OS=Rattus norvegicus GN=Ptprn PE=1 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 3.911e-16 Identity = 54/141 (38.30%), Postives = 83/141 (58.87%), Query Frame = 1 Query: 250 LSFFKEKLQNKSREISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAE 672 L++ ++ L+N+ R +++E+ L A + +P+ C A N+ KNR+ D LP+D R+ LK + P+ YINAS I ++ +IATQGPL HT DFW+MV + C VIVMLT LV++ + +C Y+ E Sbjct: 700 LAYMEDHLRNRDR-LAKEWQALCAYQAEPNT----CATAQGEGNIKKNRHPDFLPYDHARIKLKV--ESSPSRSDYINASPI-IEHDPRMPAYIATQGPLSHTIADFWQMVWESGCTVIVMLTPLVED-GVKQCDRYWPDE 831 The following BLAST results are available for this feature:
BLAST of DY304646 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 94
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Sequences
The
following sequences are available for this feature:
EST sequence >DY304646 ID=DY304646; Name=DY304646; organism=Citrus clementina; type=EST; length=977bpback to top |