DY304661
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY304661 vs. ExPASy Swiss-Prot
Match: RPD3_YEAST (Histone deacetylase RPD3 OS=Saccharomyces cerevisiae GN=RPD3 PE=1 SV=1) HSP 1 Score: 292.738 bits (748), Expect = 9.134e-90 Identity = 133/183 (72.68%), Postives = 156/183 (85.25%), Query Frame = 2 Query: 131 APPMGSTALSNASPKKVAYFYDSDIGNYAYVTGHPMKPHRIRLAHSLIMQYNLYQKMEIYRAKPATRGEMTQFHTDDYIDFLQKVTPDNMDSYMREQGKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRQKCDIAINWAGGLHHAKKCEASGFCYVNDIVLGILELLRFMKRVLYIDIDV 679 A P + + ++VAYFYD+D+GNYAY GHPMKPHRIR+AHSLIM Y LY+KMEIYRAKPAT+ EM QFHTD+YIDFL +VTPDN++ + RE K+NVGDDCPVFDGL+E+C IS GGSMEGAARLNR KCD+A+N+AGGLHHAKK EASGFCY+NDIVLGI+ELLR+ RVLYIDIDV Sbjct: 5 ATPFDPITVKPSDKRRVAYFYDADVGNYAYGAGHPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEMCQFHTDEYIDFLSRVTPDNLEMFKRESVKFNVGDDCPVFDGLYEYCSISGGGSMEGAARLNRGKCDVAVNYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYIDIDV 187 HSP 2 Score: 55.4546 bits (132), Expect = 9.134e-90 Identity = 23/30 (76.67%), Postives = 25/30 (83.33%), Query Frame = 3 Query: 678 LHHGDGGEEAFYTTDLVMTVSFHSYGDIFP 767 +HHGDG EEAFYTTD VMT SFH YG+ FP Sbjct: 187 VHHGDGVEEAFYTTDRVMTCSFHKYGEFFP 216 HSP 3 Score: 26.1794 bits (56), Expect = 9.134e-90 Identity = 10/17 (58.82%), Postives = 14/17 (82.35%), Query Frame = 1 Query: 760 FSRSGEVRDIGIWSGKN 810 F +GE+RDIG+ +GKN Sbjct: 215 FPGTGELRDIGVGAGKN 231
BLAST of DY304661 vs. ExPASy Swiss-Prot
Match: HDAC1_STRPU (Histone deacetylase 1 OS=Strongylocentrotus purpuratus GN=HDAC1 PE=2 SV=1) HSP 1 Score: 256.529 bits (654), Expect = 8.696e-79 Identity = 112/174 (64.37%), Postives = 142/174 (81.61%), Query Frame = 2 Query: 158 SNASPKKVAYFYDSDIGNYAYVTGHPMKPHRIRLAHSLIMQYNLYQKMEIYRAKPATRGEMTQFHTDDYIDFLQKVTPDNMDSYMREQGKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRQKCDIAINWAGGLHHAKKCEASGFCYVNDIVLGILELLRFMKRVLYIDIDV 679 S + K+V Y+YD D+GNY Y GHPMKPHRIR+ H+LI+ Y LY+KMEIYR A EMT++H+DDY+ FL+ + PDNM Y ++ ++NVG+DCPVFDGL+EFC +S+GGS+ GA +LN+Q+ DIAINWAGGLHHAKK EASGFCYVNDIVL ILELL++ +RVLYIDID+ Sbjct: 3 STGTKKRVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLILNYGLYRKMEIYRPHKAVMEEMTKYHSDDYVKFLRTIRPDNMSEYTKQMQRFNVGEDCPVFDGLYEFCQLSSGGSVAGAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDI 176 HSP 2 Score: 59.6918 bits (143), Expect = 8.696e-79 Identity = 36/84 (42.86%), Postives = 46/84 (54.76%), Query Frame = 3 Query: 678 LHHGDGGEEAFYTTDLVMTVSFHSYGDIFPVR*SAGHRHLV----REEYCVHFPLLTGTRN-NLKKPFFNLSLKTLKFYPAQRI 914 +HHGDG EEAFYTTD VMTVSFH YG+ FP G + + Y V+FPL G + + K F + K ++ Y I Sbjct: 176 IHHGDGVEEAFYTTDRVMTVSFHKYGEYFP---GTGDLRDIGAGKGKYYAVNFPLRDGIDDESYDKIFKPIMCKVMEMYQPSAI 256
BLAST of DY304661 vs. ExPASy Swiss-Prot
Match: HDAC1_CHICK (Histone deacetylase 1 OS=Gallus gallus GN=HDAC1 PE=2 SV=1) HSP 1 Score: 258.07 bits (658), Expect = 1.481e-78 Identity = 113/176 (64.20%), Postives = 143/176 (81.25%), Query Frame = 2 Query: 152 ALSNASPKKVAYFYDSDIGNYAYVTGHPMKPHRIRLAHSLIMQYNLYQKMEIYRAKPATRGEMTQFHTDDYIDFLQKVTPDNMDSYMREQGKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRQKCDIAINWAGGLHHAKKCEASGFCYVNDIVLGILELLRFMKRVLYIDIDV 679 AL+ + +KV Y+YD D+GNY Y GHPMKPHRIR+ H+L++ Y LY+KMEIYR A EMT++H+DDYI FL+ + PDNM Y ++ ++NVG+DCPVFDGLFEFC +SAGGS+ A +LN+Q+ DIA+NWAGGLHHAKK EASGFCYVNDIVL ILELL++ +RVLYIDID+ Sbjct: 2 ALTQGTKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDI 177 HSP 2 Score: 57.3806 bits (137), Expect = 1.481e-78 Identity = 24/30 (80.00%), Postives = 26/30 (86.67%), Query Frame = 3 Query: 678 LHHGDGGEEAFYTTDLVMTVSFHSYGDIFP 767 +HHGDG EEAFYTTD VMTVSFH YG+ FP Sbjct: 177 IHHGDGVEEAFYTTDRVMTVSFHKYGEYFP 206
BLAST of DY304661 vs. ExPASy Swiss-Prot
Match: HDAC2_MOUSE (Histone deacetylase 2 OS=Mus musculus GN=Hdac2 PE=1 SV=1) HSP 1 Score: 257.299 bits (656), Expect = 2.520e-78 Identity = 113/169 (66.86%), Postives = 140/169 (82.84%), Query Frame = 2 Query: 173 KKVAYFYDSDIGNYAYVTGHPMKPHRIRLAHSLIMQYNLYQKMEIYRAKPATRGEMTQFHTDDYIDFLQKVTPDNMDSYMREQGKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRQKCDIAINWAGGLHHAKKCEASGFCYVNDIVLGILELLRFMKRVLYIDIDV 679 KKV Y+YD DIGNY Y GHPMKPHRIR+ H+L++ Y LY+KMEIYR AT EMT++H+D+YI FL+ + PDNM Y ++ ++NVG+DCPVFDGLFEFC +S GGS+ GA +LNRQ+ D+A+NWAGGLHHAKK EASGFCYVNDIVL ILELL++ +RVLYIDID+ Sbjct: 10 KKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDI 178 HSP 2 Score: 57.3806 bits (137), Expect = 2.520e-78 Identity = 24/30 (80.00%), Postives = 26/30 (86.67%), Query Frame = 3 Query: 678 LHHGDGGEEAFYTTDLVMTVSFHSYGDIFP 767 +HHGDG EEAFYTTD VMTVSFH YG+ FP Sbjct: 178 IHHGDGVEEAFYTTDRVMTVSFHKYGEYFP 207
BLAST of DY304661 vs. ExPASy Swiss-Prot
Match: HDAC2_HUMAN (Histone deacetylase 2 OS=Homo sapiens GN=HDAC2 PE=1 SV=2) HSP 1 Score: 257.299 bits (656), Expect = 2.520e-78 Identity = 113/169 (66.86%), Postives = 140/169 (82.84%), Query Frame = 2 Query: 173 KKVAYFYDSDIGNYAYVTGHPMKPHRIRLAHSLIMQYNLYQKMEIYRAKPATRGEMTQFHTDDYIDFLQKVTPDNMDSYMREQGKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRQKCDIAINWAGGLHHAKKCEASGFCYVNDIVLGILELLRFMKRVLYIDIDV 679 KKV Y+YD DIGNY Y GHPMKPHRIR+ H+L++ Y LY+KMEIYR AT EMT++H+D+YI FL+ + PDNM Y ++ ++NVG+DCPVFDGLFEFC +S GGS+ GA +LNRQ+ D+A+NWAGGLHHAKK EASGFCYVNDIVL ILELL++ +RVLYIDID+ Sbjct: 10 KKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDI 178 HSP 2 Score: 57.3806 bits (137), Expect = 2.520e-78 Identity = 24/30 (80.00%), Postives = 26/30 (86.67%), Query Frame = 3 Query: 678 LHHGDGGEEAFYTTDLVMTVSFHSYGDIFP 767 +HHGDG EEAFYTTD VMTVSFH YG+ FP Sbjct: 178 IHHGDGVEEAFYTTDRVMTVSFHKYGEYFP 207
BLAST of DY304661 vs. ExPASy Swiss-Prot
Match: HDAC1_DROME (Histone deacetylase Rpd3 OS=Drosophila melanogaster GN=Rpd3 PE=1 SV=2) HSP 1 Score: 255.373 bits (651), Expect = 1.240e-77 Identity = 113/175 (64.57%), Postives = 142/175 (81.14%), Query Frame = 2 Query: 155 LSNASPKKVAYFYDSDIGNYAYVTGHPMKPHRIRLAHSLIMQYNLYQKMEIYRAKPATRGEMTQFHTDDYIDFLQKVTPDNMDSYMREQGKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRQKCDIAINWAGGLHHAKKCEASGFCYVNDIVLGILELLRFMKRVLYIDIDV 679 + + S K+V Y+YDSDIGNY Y GHPMKPHRIR+ H+L++ Y LY+KMEIYR AT EMT+FH+D+Y+ FL+ + PDNM Y ++ ++NVG+DCPVFDGL+EFC +SAGGS+ A +LN+Q +I INW GGLHHAKK EASGFCYVNDIVLGILELL++ +RVLYIDIDV Sbjct: 1 MQSHSKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTKFHSDEYVRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDV 175 HSP 2 Score: 56.9954 bits (136), Expect = 1.240e-77 Identity = 24/30 (80.00%), Postives = 26/30 (86.67%), Query Frame = 3 Query: 678 LHHGDGGEEAFYTTDLVMTVSFHSYGDIFP 767 +HHGDG EEAFYTTD VMTVSFH YG+ FP Sbjct: 175 VHHGDGVEEAFYTTDRVMTVSFHKYGEYFP 204
BLAST of DY304661 vs. ExPASy Swiss-Prot
Match: HDA1B_XENLA (Probable histone deacetylase 1-B OS=Xenopus laevis GN=hdac1-B PE=1 SV=1) HSP 1 Score: 255.758 bits (652), Expect = 2.110e-77 Identity = 111/176 (63.07%), Postives = 143/176 (81.25%), Query Frame = 2 Query: 152 ALSNASPKKVAYFYDSDIGNYAYVTGHPMKPHRIRLAHSLIMQYNLYQKMEIYRAKPATRGEMTQFHTDDYIDFLQKVTPDNMDSYMREQGKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRQKCDIAINWAGGLHHAKKCEASGFCYVNDIVLGILELLRFMKRVLYIDIDV 679 ALS + KKV Y+YD D+GNY Y GHPMKPHRIR+ H+L++ Y LY+KMEIYR A+ EMT++H+DDYI FL+ + PDNM Y ++ ++NVG+DCPVFDGLFEFC +S GGS+ A +LN+Q+ DI++NW+GGLHHAKK EASGFCYVNDIVL ILELL++ +RV+YIDID+ Sbjct: 2 ALSQGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKASAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDISVNWSGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVVYIDIDI 177 HSP 2 Score: 55.8398 bits (133), Expect = 2.110e-77 Identity = 23/30 (76.67%), Postives = 26/30 (86.67%), Query Frame = 3 Query: 678 LHHGDGGEEAFYTTDLVMTVSFHSYGDIFP 767 +HHGDG EEAFYTTD VM+VSFH YG+ FP Sbjct: 177 IHHGDGVEEAFYTTDRVMSVSFHKYGEYFP 206
BLAST of DY304661 vs. ExPASy Swiss-Prot
Match: HDAC1_RAT (Histone deacetylase 1 OS=Rattus norvegicus GN=Hdac1 PE=2 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 2.110e-77 Identity = 111/176 (63.07%), Postives = 141/176 (80.11%), Query Frame = 2 Query: 152 ALSNASPKKVAYFYDSDIGNYAYVTGHPMKPHRIRLAHSLIMQYNLYQKMEIYRAKPATRGEMTQFHTDDYIDFLQKVTPDNMDSYMREQGKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRQKCDIAINWAGGLHHAKKCEASGFCYVNDIVLGILELLRFMKRVLYIDIDV 679 A + + +KV Y+YD D+GNY Y GHPMKPHRIR+ H+L++ Y LY+KMEIYR A EMT++H+DDYI FL+ + PDNM Y ++ ++NVG+DCPVFDGLFEFC +S GGS+ A +LN+Q+ DIA+NWAGGLHHAKK EASGFCYVNDIVL ILELL++ +RVLYIDID+ Sbjct: 2 AQTQGTKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDI 177 HSP 2 Score: 57.3806 bits (137), Expect = 2.110e-77 Identity = 24/30 (80.00%), Postives = 26/30 (86.67%), Query Frame = 3 Query: 678 LHHGDGGEEAFYTTDLVMTVSFHSYGDIFP 767 +HHGDG EEAFYTTD VMTVSFH YG+ FP Sbjct: 177 IHHGDGVEEAFYTTDRVMTVSFHKYGEYFP 206
BLAST of DY304661 vs. ExPASy Swiss-Prot
Match: HDAC1_MOUSE (Histone deacetylase 1 OS=Mus musculus GN=Hdac1 PE=1 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 2.110e-77 Identity = 111/176 (63.07%), Postives = 141/176 (80.11%), Query Frame = 2 Query: 152 ALSNASPKKVAYFYDSDIGNYAYVTGHPMKPHRIRLAHSLIMQYNLYQKMEIYRAKPATRGEMTQFHTDDYIDFLQKVTPDNMDSYMREQGKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRQKCDIAINWAGGLHHAKKCEASGFCYVNDIVLGILELLRFMKRVLYIDIDV 679 A + + +KV Y+YD D+GNY Y GHPMKPHRIR+ H+L++ Y LY+KMEIYR A EMT++H+DDYI FL+ + PDNM Y ++ ++NVG+DCPVFDGLFEFC +S GGS+ A +LN+Q+ DIA+NWAGGLHHAKK EASGFCYVNDIVL ILELL++ +RVLYIDID+ Sbjct: 2 AQTQGTKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDI 177 HSP 2 Score: 57.3806 bits (137), Expect = 2.110e-77 Identity = 24/30 (80.00%), Postives = 26/30 (86.67%), Query Frame = 3 Query: 678 LHHGDGGEEAFYTTDLVMTVSFHSYGDIFP 767 +HHGDG EEAFYTTD VMTVSFH YG+ FP Sbjct: 177 IHHGDGVEEAFYTTDRVMTVSFHKYGEYFP 206
BLAST of DY304661 vs. ExPASy Swiss-Prot
Match: HDAC1_BOVIN (Histone deacetylase 1 OS=Bos taurus GN=HDAC1 PE=2 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 2.110e-77 Identity = 111/176 (63.07%), Postives = 141/176 (80.11%), Query Frame = 2 Query: 152 ALSNASPKKVAYFYDSDIGNYAYVTGHPMKPHRIRLAHSLIMQYNLYQKMEIYRAKPATRGEMTQFHTDDYIDFLQKVTPDNMDSYMREQGKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRQKCDIAINWAGGLHHAKKCEASGFCYVNDIVLGILELLRFMKRVLYIDIDV 679 A + + +KV Y+YD D+GNY Y GHPMKPHRIR+ H+L++ Y LY+KMEIYR A EMT++H+DDYI FL+ + PDNM Y ++ ++NVG+DCPVFDGLFEFC +S GGS+ A +LN+Q+ DIA+NWAGGLHHAKK EASGFCYVNDIVL ILELL++ +RVLYIDID+ Sbjct: 2 AQTQGTKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDI 177 HSP 2 Score: 57.3806 bits (137), Expect = 2.110e-77 Identity = 24/30 (80.00%), Postives = 26/30 (86.67%), Query Frame = 3 Query: 678 LHHGDGGEEAFYTTDLVMTVSFHSYGDIFP 767 +HHGDG EEAFYTTD VMTVSFH YG+ FP Sbjct: 177 IHHGDGVEEAFYTTDRVMTVSFHKYGEYFP 206 The following BLAST results are available for this feature:
BLAST of DY304661 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >DY304661 ID=DY304661; Name=DY304661; organism=Citrus clementina; type=EST; length=916bpback to top |