DY304676
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY304676 vs. ExPASy Swiss-Prot
Match: UBAX1_ARATH (UBA and UBX domain-containing protein At4g15410 OS=Arabidopsis thaliana GN=At4g15410 PE=2 SV=1) HSP 1 Score: 273.092 bits (697), Expect = 1.619e-72 Identity = 151/303 (49.83%), Postives = 189/303 (62.38%), Query Frame = 3 Query: 42 ASRDKKPAKPSSSR-------AGGIRTLSDLNRRSGPXXXXXXXAPQEYYTGGEKSGMLVQDPSKGDPNDVDAIFNQAKELGAVEGPLEHLXXXXXXXXFTGTARLLSGETVPSAPQQ-----PEPIVHNIVFWANGFTVNDGPLRRLDDPENASFLESIKKSECPKELEPADKRSSVHVNLIRRDVKCPEPEKHHVPFHGVGRTLGSS-STAASEPTVDSTPVNTASSSSEGLVVEENLPSTSVHITLADGTRLIAHFNLHHTFTDIHSVLDASRPGTARNYQLQMKEFPSKFLADPNSNIK 911 A +K+ PS R AG IRT +DLNR EYYTGG+KSGM+VQDP K DVD +F+QA++ AV+ P+E FTG ARLLSGE V S+PQQ P+ I+H I FW NGFTVNDGPLR DPENA+F+ SI +SECP ELEPADK+ VHV+L+RR EP K PF GVGRTLG+S S ++S P S P+N A + S GLVV+ P+TS+ + LADGTRL++ FN HHT D+ +DASRPG ++ YQL FP K L + + I+ Sbjct: 111 AGENKETENPSGIRSSRSRQHAGNIRTFADLNRSPADGEGSDSDEANEYYTGGQKSGMMVQDPKK--VKDVDELFDQARQ-SAVDRPVE--PSRSASTSFTGAARLLSGEAVSSSPQQQQQEQPQRIMHTITFWLNGFTVNDGPLRGFSDPENAAFMNSISRSECPSELEPADKKIPVHVDLVRRGENFTEPPKPKNPFQGVGRTLGASGSGSSSAPQASSAPMNVAPAPSRGLVVDPAAPTTSIQLRLADGTRLVSRFNNHHTVRDVRGFIDASRPGGSKEYQLLTMGFPPKQLTELDQTIE 408
BLAST of DY304676 vs. ExPASy Swiss-Prot
Match: UBX1_EMENI (UBX domain-containing protein 1 OS=Emericella nidulans GN=ubx1 PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 3.090e-31 Identity = 94/300 (31.33%), Postives = 134/300 (44.67%), Query Frame = 3 Query: 36 SMASRDKKPAKPSSSRAGGIR---TLSDLNRRSGPXXXXXXXAPQEYYTGGEKSGMLVQDPSKGDPNDVDAIFNQAKELGAVEGPLEHLXXXXXXXXFTGTARLLSGETVPSA----------PQQPEPIVHNIVFWANGFTVNDGPLRRLDDPENASFLESIKKSECPKELEPADKRSSVHVNLIRRDVKCPEPEKHHVPFHGVGRTLGSSSTAASEPT-VDSTPVNTASSSSEGLVVEENLPSTSVHITLADGTRLIAHFNLHHTFTDIHSVLDASRPGTARNYQLQMKEFPSKFLAD 893 S S P + SSSR + TL DL + Q+++ GGEKSG+ VQ+P ++ P + FTG AR L GE PS PQ P + + FWA+GF+V+DG L R DDP+NA L SI++ P + A V V + + D K P+ + PF G G+ LGS + P + P +SS V+E+ P ++ I L DGTRL + FN HT D++ + A+ P + + + FPSK L D Sbjct: 60 SAKSSSSTPRESSSSRKQPPKKFATLGDLASGAADSSDDDDDENQDFFAGGEKSGLAVQNPDDLKKKIIEKARRTQLPASDDSEPRRNY--------FTGPARTLGGEDTPSRVIDTPSGPAQPQIPRRVRRTLHFWADGFSVDDGELYRSDDPQNAEILNSIRQGRAPLSIMNAQHGQDVDVEIKQHDEKYVRPKPKYQPFAGKGQRLGSPTPGIRAPAPSEPAPAPQSSSGPPKPNVDESQPVVTLQIRLGDGTRLTSRFNTTHTIGDVYDFVSAASPQSQARPWVLLTTFPSKELTD 351
BLAST of DY304676 vs. ExPASy Swiss-Prot
Match: NSF1C_DICDI (NSFL1 cofactor p47 homolog OS=Dictyostelium discoideum GN=nsfl1c PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 2.003e-30 Identity = 106/339 (31.27%), Postives = 165/339 (48.67%), Query Frame = 3 Query: 18 SRKNFQSMASRDKKPAKPSSSRAGGIRTLSDLNRRS------GPXXXXXXXAPQEYYTGGEKSGMLVQDPSK-----GDPNDVDAIFNQAKELGAV---EGPLEHLXXXXXXXXFTGTARLLSGETVPSAPQQPEP----IVHNIVFWANGFTVNDGPLRRLDDPENASFLESIKKSECPKELE-PADKRSSVHVNLI-RRDVKCPEPEK-HHVPFHGVGRTLGSSSTAASE------------PTVDSTPVNTASSSSEGLVVEENLPSTSVHITLADGTRLIAHFNLHHTFTDIHSVLDASRPGTARNYQLQMKEFPSKFLADPNSNIKARRALPNS 935 SR + ++ P+ R GGIRTLSD N Q+Y+TGGEKSG++V+ K G + V+ +F+ AK GAV E +E G G S P++ +P + + FW GFT++DGPLR+ D+PEN L+ I++ P+EL+ A + + V LI + EP K +V F G G+TLGSSST+ + T +T +T + SS + V+++ P+T+V I LA+G+RL FN HT D+ + +++S G+ +++ L + FP K + +P S L N+ Sbjct: 76 SRPVYSKPVAKTVSKKAPAGGRVGGIRTLSDFNNDDHDDHDHSDGDDDEDDRSQQYFTGGEKSGLVVESAPKKGKNGGSGDIVNDVFDSAKRHGAVASNEKKVEKPDSFDSVGYQLGATD--QGNRNVSKPKEKDPNSQVVEVKVTFWNQGFTIDDGPLRKYDNPENKELLDDIQRGIVPRELQKKATTPNGLSVTLINNHNQDYVEPAKPKYVAFSGGGQTLGSSSTSTNNNNNNNNNNNNRATTTSTTTTSTPNVSS--INVDQSQPTTTVQIRLANGSRLSTTFNHSHTLQDVINYINSS-SGSNQSFDL-LTGFPQKPVTNPTSTTLKDAGLLNA 408
BLAST of DY304676 vs. ExPASy Swiss-Prot
Match: NSF1C_PONAB (NSFL1 cofactor p47 OS=Pongo abelii GN=NSFL1C PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 5.105e-26 Identity = 86/270 (31.85%), Postives = 130/270 (48.15%), Query Frame = 3 Query: 159 QEYYTGG-EKSGM-LVQDPSKGDPND-VDAIFNQAKELGAV--EGPLEHLXXXXXXXXFTGTARLL-------SGETVPSAPQQPEPIVHNIV-FWANGFTVNDGPLRRLDDPENASFLESIKKSECPKELEPADKRSSVHVNLI-RRDVKCPEPEKHHVPFHGVGRTLGSSSTAASEPTVDSTPVNTASSSSEGLVVEENLPSTSVHITLADGTRLIAHFNLHHTFTDIHSVLDASRPGTARNYQLQMKEFPSKFLADPNSNIKARRAL 926 Q +Y GG E+SG +V P K PN+ VD +F AKE GAV E + F G L S Q VH ++ W +GF++++G LR DP NA FLESI++ E P EL V++++ RD +P+ F G G+ LGS++ + + + +S ++++E+ P+T++ I LADG RL+ FN H +DI + +RP A + M FP+K LAD + +K L Sbjct: 92 QRFYAGGSERSGQQIVGPPRKKSPNELVDDLFKGAKEHGAVAVERVTKSPGETSKPRPFAGGGYRLGAAPEEESAYVAGEKRQHSSQDVHVVLKLWKSGFSLDNGELRSYQDPSNAQFLESIRRGEVPAELRRLAHGGQVNLDMEDHRDEDFVKPKGAFKAFTGEGQKLGSTAPQVLSTSSPAQQAENEAKASSSILIDESEPTTNIQIRLADGGRLVQKFNHSHRISDIRLFIVDARPAMAATSFILMTTFPNKELADESQTLKEANLL 361
BLAST of DY304676 vs. ExPASy Swiss-Prot
Match: NSF1C_HUMAN (NSFL1 cofactor p47 OS=Homo sapiens GN=NSFL1C PE=1 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 5.105e-26 Identity = 86/270 (31.85%), Postives = 130/270 (48.15%), Query Frame = 3 Query: 159 QEYYTGG-EKSGM-LVQDPSKGDPND-VDAIFNQAKELGAV--EGPLEHLXXXXXXXXFTGTARLL-------SGETVPSAPQQPEPIVHNIV-FWANGFTVNDGPLRRLDDPENASFLESIKKSECPKELEPADKRSSVHVNLI-RRDVKCPEPEKHHVPFHGVGRTLGSSSTAASEPTVDSTPVNTASSSSEGLVVEENLPSTSVHITLADGTRLIAHFNLHHTFTDIHSVLDASRPGTARNYQLQMKEFPSKFLADPNSNIKARRAL 926 Q +Y GG E+SG +V P K PN+ VD +F AKE GAV E + F G L S Q VH ++ W +GF++++G LR DP NA FLESI++ E P EL V++++ RD +P+ F G G+ LGS++ + + + +S ++++E+ P+T++ I LADG RL+ FN H +DI + +RP A + M FP+K LAD + +K L Sbjct: 92 QRFYAGGSERSGQQIVGPPRKKSPNELVDDLFKGAKEHGAVAVERVTKSPGETSKPRPFAGGGYRLGAAPEEESAYVAGEKRQHSSQDVHVVLKLWKSGFSLDNGELRSYQDPSNAQFLESIRRGEVPAELRRLAHGGQVNLDMEDHRDEDFVKPKGAFKAFTGEGQKLGSTAPQVLSTSSPAQQAENEAKASSSILIDESEPTTNIQIRLADGGRLVQKFNHSHRISDIRLFIVDARPAMAATSFILMTTFPNKELADESQTLKEANLL 361
BLAST of DY304676 vs. ExPASy Swiss-Prot
Match: NSF1C_BOVIN (NSFL1 cofactor p47 OS=Bos taurus GN=NSFL1C PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 6.667e-26 Identity = 86/275 (31.27%), Postives = 130/275 (47.27%), Query Frame = 3 Query: 159 QEYYTGG-EKSGM-LVQDPSKGDPND-VDAIFNQAKELGAV--EGPLEHLXXXXXXXXFTGTARLLSGETVPSAPQQPEPIVHN-------------IVFWANGFTVNDGPLRRLDDPENASFLESIKKSECPKELEPADKRSSVHVNLI-RRDVKCPEPEKHHVPFHGVGRTLGSSSTAASEPTVDSTPVNTASSSSEGLVVEENLPSTSVHITLADGTRLIAHFNLHHTFTDIHSVLDASRPGTARNYQLQMKEFPSKFLADPNSNIKARRAL 926 Q +Y GG E+SG +V P K PN+ VD +F AKE GAV E + F G G + +AP++ V + W GF++++G LR DP NA FLESI++ E P EL V++++ RD +P+ F G G+ LGS++ + + + +S + ++E+ P+T++ I LADG RL+ FN H +DI + +RP A + M FP+K LAD N +K L Sbjct: 92 QRFYAGGSERSGQQIVGPPRKRSPNELVDDLFKGAKEHGAVAVERVTKSPGETSKPRPFAG-----GGYRLGAAPEEESAYVAGERRRHSGQDVHVVLKLWKTGFSLDNGELRSYQDPSNAQFLESIRRGEVPAELRRLAHGGQVNLDMEDHRDEDFVKPKGAFKAFTGEGQKLGSTAPQILNTSSPAQQAENEAKASSSISIDESQPTTNIQIRLADGGRLVQKFNHSHRISDIRLFIVDARPAMAATSFVLMTTFPNKELADENQTLKEANLL 361
BLAST of DY304676 vs. ExPASy Swiss-Prot
Match: NSF1C_RAT (NSFL1 cofactor p47 OS=Rattus norvegicus GN=Nsfl1c PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 1.137e-25 Identity = 86/275 (31.27%), Postives = 129/275 (46.91%), Query Frame = 3 Query: 159 QEYYTGG-EKSGM-LVQDPSKGDPND-VDAIFNQAKELGAV--EGPLEHLXXXXXXXXFTGTARLLSGETVPSAPQQPEPIVHN-------------IVFWANGFTVNDGPLRRLDDPENASFLESIKKSECPKELEPADKRSSVHVNLI-RRDVKCPEPEKHHVPFHGVGRTLGSSSTAASEPTVDSTPVNTASSSSEGLVVEENLPSTSVHITLADGTRLIAHFNLHHTFTDIHSVLDASRPGTARNYQLQMKEFPSKFLADPNSNIKARRAL 926 Q +Y GG E+SG +V P K PN+ VD +F AKE GAV E + F G G + +AP++ V + W GF++++G LR DP NA FLESI++ E P EL V++++ RD +P+ F G G+ LGS++ + + + +S +++ E P+T++ I LADG RL+ FN H +DI + +RP A + M FP+K LAD N +K L Sbjct: 92 QRFYAGGSERSGQQIVGPPRKKSPNELVDDLFKGAKEHGAVAVERVTKSPGETSKPRPFAG-----GGYRLGAAPEEESAYVAGERRRHSGQDVHVVLKLWKTGFSLDNGDLRSYQDPSNAQFLESIRRGEVPAELRRLAHGGQVNLDMEDHRDEDFVKPKGAFKAFTGEGQKLGSTAPQVLNTSSPAQQAENEAKASSSILINEAEPTTNIQIRLADGGRLVQKFNHSHRISDIRLFIVDARPAMAATSFVLMTTFPNKELADENQTLKEANLL 361
BLAST of DY304676 vs. ExPASy Swiss-Prot
Match: NSF1C_MOUSE (NSFL1 cofactor p47 OS=Mus musculus GN=Nsfl1c PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 1.137e-25 Identity = 86/275 (31.27%), Postives = 129/275 (46.91%), Query Frame = 3 Query: 159 QEYYTGG-EKSGM-LVQDPSKGDPND-VDAIFNQAKELGAV--EGPLEHLXXXXXXXXFTGTARLLSGETVPSAPQQPEPIVHN-------------IVFWANGFTVNDGPLRRLDDPENASFLESIKKSECPKELEPADKRSSVHVNLI-RRDVKCPEPEKHHVPFHGVGRTLGSSSTAASEPTVDSTPVNTASSSSEGLVVEENLPSTSVHITLADGTRLIAHFNLHHTFTDIHSVLDASRPGTARNYQLQMKEFPSKFLADPNSNIKARRAL 926 Q +Y GG E+SG +V P K PN+ VD +F AKE GAV E + F G G + +AP++ V + W GF++++G LR DP NA FLESI++ E P EL V++++ RD +P+ F G G+ LGS++ + + + +S +++ E P+T++ I LADG RL+ FN H +DI + +RP A + M FP+K LAD N +K L Sbjct: 92 QRFYAGGSERSGQQIVGPPRKKSPNELVDDLFKGAKEHGAVAVERVTKSPGETSKPRPFAG-----GGYRLGAAPEEESAYVAGERRRHSGQDVHVVLKLWKTGFSLDNGDLRSYQDPSNAQFLESIRRGEVPAELRRLAHGGQVNLDMEDHRDEDFVKPKGAFKAFTGEGQKLGSTAPQVLNTSSPAQQAENEAKASSSILINEAEPTTNIQIRLADGGRLVQKFNHSHRISDIRLFIVDARPAMAATSFVLMTTFPNKELADENQTLKEANLL 361
BLAST of DY304676 vs. ExPASy Swiss-Prot
Match: NSF1C_CHICK (NSFL1 cofactor p47 OS=Gallus gallus GN=NSFL1C PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 7.371e-25 Identity = 83/275 (30.18%), Postives = 129/275 (46.91%), Query Frame = 3 Query: 159 QEYYTGG-EKSGM-LVQDPSKGDPND-VDAIFNQAKELGAV--EGPLEHLXXXXXXXXFTGTARLLSGETVPSAPQQPEPIV-----HNIV--------FWANGFTVNDGPLRRLDDPENASFLESIKKSECPKELEPADKRSSVHVNLI-RRDVKCPEPEKHHVPFHGVGRTLGSSSTAASEPTVDSTPVNTASSSSEGLVVEENLPSTSVHITLADGTRLIAHFNLHHTFTDIHSVLDASRPGTARNYQLQMKEFPSKFLADPNSNIKARRAL 926 Q +Y GG E+SG +V P K PN+ V+ +F AKE GAV + + F G G + + P++ V HN V W GF+++ G LR DP NA FL+ I++ E P EL + V++++ RD + +P+ F G G+ LGS++ + + + +S + ++E+ P T++ I LADG RL+ FN +H DI + +RP A + M FP+K L D N +K L Sbjct: 91 QRFYAGGSERSGQQIVGPPRKKSPNELVEDLFKGAKEHGAVAVDRTAKSSGESSKPKPFAG-----GGYRLGATPEEESAYVAGERRHNSVQDVHVVLKLWKTGFSLDSGELRSYQDPSNAQFLDDIRRGEVPAELRRLARGGQVNLDMEDHRDEEYVKPKSVFKAFTGEGQKLGSTAPQVLSTSSPAQQAENEAKASSAIAIDESEPVTNIQIRLADGGRLVQKFNHNHRIRDIRLFIVDARPAMAATSFVLMTTFPNKELTDENQTLKEANLL 360
BLAST of DY304676 vs. ExPASy Swiss-Prot
Match: UBX2B_CHICK (UBX domain-containing protein 2B OS=Gallus gallus GN=UBXN2B PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 3.424e-22 Identity = 83/301 (27.57%), Postives = 136/301 (45.18%), Query Frame = 3 Query: 48 RDKKPAKPSSSRAGGIRTLSDLNRRSGPXXXXXXXAPQEYYTG-GEKSGMLVQDPSKGDPNDVDAIFNQAKELGAVEGPLEHLXXXXXXXX----FTGTARLLSGETVPSAPQ---QPEPIVHNIVFWANGFTVNDGPLRRLDDPENASFLESIKKSECPKELEPADKRSSVHVNLI-RRDVKCPEPEKHHVPFHGVGRTLGSSSTAASEPTVDSTPVNTASSSSEGL----VVEENLPSTSVHITLADGTRLIAHFNLHHTFTDIHSVLDASRPGTARNYQLQMKEFPSKFLADPNSNIK 911 R KP S + G++ S + R Q +Y+G E G+ + S V +F +AKE GAV PL+ F+G L + + + + + + W NGF+++DG LR DP NA FLES+K+ E P +L+ V++++ ++ + +P F G G+ LGS + P + STP + L ++++++P+T + I LADG+RLI FN H DI + SRP A + + FP+K L D + ++ Sbjct: 58 RSDKPTTTKMSNSKGLKIDSFRSLRKPERSMSDDKENQRFYSGDSEYRGLQIWGASNNPSKIVAELFKEAKEHGAV--PLDEASRTSGDFSKAKSFSGGGYRLGDSSQKHSEYIYGENQDVQILLKLWRNGFSLDDGELRSYSDPINAQFLESVKRGEIPVDLQRLVHGGQVNLDMEDHQEQEYVKPRLRFKAFSGEGQKLGSLT-----PEIVSTPSSPEEEDKSILNAPVLIDDSVPATKIQIRLADGSRLIQRFNQTHRIKDIRDFIIQSRPAFATTDFVLVTTFPNKELTDESLTLR 351 The following BLAST results are available for this feature:
BLAST of DY304676 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY304676 ID=DY304676; Name=DY304676; organism=Citrus clementina; type=EST; length=938bpback to top |