DY304682

Overview
NameDY304682
Unique NameDY304682
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length984
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY304682 vs. ExPASy Swiss-Prot
Match: PGES2_DANRE (Prostaglandin E synthase 2 OS=Danio rerio GN=ptges2 PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 6.409e-39
Identity = 93/202 (46.04%), Postives = 119/202 (58.91%), Query Frame = 3
Query:  369 LPTDLVPKEVVLYQYEACPFCNKVKAFLDYYDIPYKVVEVNPINKKEIKWSEYKKVPILMVDGE-QLVDSSAIIDQL-------DQKLT------PKRKADSPSGDD----------------------------EEKKWRGWVDNHLVHLLSPNIYRNTSEALESFDYITSSGNFSFTEKLTAKYAGAAAMYFVSKN*KKK 848
            L TDL   ++ LYQY+ CPFC+KV+AFLDY+ +PY++VEVNP+ ++EIKWS Y+KVPILMV+G  QL DSS II  L       D+K++      P+ K+ +  G D                            EE KWR W D+ LVHL+SPN+YR  +EAL SFDYI   G F   E   AKY GAAAM+ +SK  K K
Sbjct:  101 LDTDL---KLTLYQYKTCPFCSKVRAFLDYHRLPYEIVEVNPVMRQEIKWSTYRKVPILMVNGTVQLNDSSVIISALKTYISSKDKKISEILACYPEMKSKNDRGKDVIEFGNKYWVMVHDADADQLYPGKDSRKEEIKWRTWADDWLVHLISPNVYRTPTEALASFDYIVREGKFGSFEGFFAKYFGAAAMWIISKRLKYK 299          

HSP 2 Score: 21.9422 bits (45), Expect = 6.409e-39
Identity = 11/30 (36.67%), Postives = 17/30 (56.67%), Query Frame = 1
Query:  820 ILCPKTEKKNNI-TDERAALYEAAETWVEA 906
            I+  + + K+N+  D R  LY+A   WV A
Sbjct:  291 IISKRLKYKHNLQADVRQDLYKAVNDWVAA 320          
BLAST of DY304682 vs. ExPASy Swiss-Prot
Match: PGES2_MOUSE (Prostaglandin E synthase 2 OS=Mus musculus GN=Ptges2 PE=1 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 3.435e-36
Identity = 88/210 (41.90%), Postives = 113/210 (53.81%), Query Frame = 3
Query:  357 AKEPLPTDLVPKEVVLYQYEACPFCNKVKAFLDYYDIPYKVVEVNPINKKEIKWSEYKKVPILMVDG----EQLVDSSAIIDQLDQKLT------------PKRKADSPSGDD----------------------------EEKKWRGWVDNHLVHLLSPNIYRNTSEALESFDYITSSGNFSFTEKLTAKYAGAAAMYFVSKN*KKKQY 854
            A+ PL   L   ++ LYQY+ CPFC+KV+AFLD++ +PY+VVEVNP+ + EIK+S Y+KVPIL+       +QL DSS II  L   L             P  KA +  G +                            EE KWR W D+ LVHL+SPN+YR  +EAL SFDYI   G F   E   AKY GAAAMY +SK  K + +
Sbjct:   91 AQLPLSNSL---QLTLYQYKTCPFCSKVRAFLDFHSLPYQVVEVNPVRRTEIKFSSYRKVPILVAQEGDSLQQLNDSSVIISALKTYLVSGQPLEEVITYYPPMKAMNDQGKEVTEFCNKYWPMLDEKEAQQMYGGKEARTEEMKWRQWADDWLVHLISPNVYRTPAEALASFDYIVREGKFGAVEAAMAKYVGAAAMYLISKRLKSRHH 297          
BLAST of DY304682 vs. ExPASy Swiss-Prot
Match: PGES2_HUMAN (Prostaglandin E synthase 2 OS=Homo sapiens GN=PTGES2 PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.305e-35
Identity = 84/196 (42.86%), Postives = 107/196 (54.59%), Query Frame = 3
Query:  393 EVVLYQYEACPFCNKVKAFLDYYDIPYKVVEVNPINKKEIKWSEYKKVPILMV----DGEQLVDSSAIIDQLDQKLT------------PKRKADSPSGDD----------------------------EEKKWRGWVDNHLVHLLSPNIYRNTSEALESFDYITSSGNFSFTEKLTAKYAGAAAMYFVSKN*KKK 848
            ++ LYQY+ CPFC+KV+AFLD++ +PY+VVEVNP+ + EIK+S Y+KVPIL+       +QL DSS II  L   L             P  KA +  G +                            EE KWR W D+ LVHL+SPN+YR  +EAL SFDYI   G F   E   AKY GAAAMY +SK  K +
Sbjct:  101 QLTLYQYKTCPFCSKVRAFLDFHALPYQVVEVNPVRRAEIKFSSYRKVPILVAQEGESSQQLNDSSVIISALKTYLVSGQPLEEIITYYPAMKAVNEQGKEVTEFGNKYWLMLNEKEAQQVYGGKEARTEEMKWRQWADDWLVHLISPNVYRTPTEALASFDYIVREGKFGAVEGAVAKYMGAAAMYLISKRLKSR 296          
BLAST of DY304682 vs. ExPASy Swiss-Prot
Match: PGES2_MACFA (Prostaglandin E synthase 2 OS=Macaca fascicularis GN=PTGES2 PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.908e-35
Identity = 84/196 (42.86%), Postives = 107/196 (54.59%), Query Frame = 3
Query:  393 EVVLYQYEACPFCNKVKAFLDYYDIPYKVVEVNPINKKEIKWSEYKKVPILMV----DGEQLVDSSAIIDQLDQKLT------------PKRKADSPSGDD----------------------------EEKKWRGWVDNHLVHLLSPNIYRNTSEALESFDYITSSGNFSFTEKLTAKYAGAAAMYFVSKN*KKK 848
            ++ LYQY+ CPFC+KV+AFLD++ +PY+VVEVNP+ + EIK+S Y+KVPIL+       +QL DSS II  L   L             P  KA +  G +                            EE KWR W D+ LVHL+SPN+YR  +EAL SFDYI   G F   E   AKY GAAAMY +SK  K +
Sbjct:  101 QLTLYQYKTCPFCSKVRAFLDFHALPYQVVEVNPVLRAEIKFSSYRKVPILVAQEGESSQQLNDSSVIISALKTYLVSGQPLEEIITYYPAMKAVNDQGKEVTEFGNKYWLMLNEKEAQQVYSGKEARTEEMKWRQWADDWLVHLISPNVYRTPTEALASFDYIVREGKFGAVEGAVAKYMGAAAMYLISKRLKSR 296          
The following BLAST results are available for this feature:
BLAST of DY304682 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
PGES2_DANRE6.409e-3946.04Prostaglandin E synthase 2 OS=Danio rerio GN=ptges... [more]
PGES2_MOUSE3.435e-3641.90Prostaglandin E synthase 2 OS=Mus musculus GN=Ptge... [more]
PGES2_HUMAN1.305e-3542.86Prostaglandin E synthase 2 OS=Homo sapiens GN=PTGE... [more]
PGES2_MACFA2.908e-3542.86Prostaglandin E synthase 2 OS=Macaca fascicularis ... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAQ9YG07RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304682 ID=DY304682; Name=DY304682; organism=Citrus clementina; type=EST; length=984bp
TGACTAATTAGTTGACAGGTGGCAAGTGACAAGTGGCAACGCCCCAAAGC
CCAAAAAACCAATCAATGAAAATCCTAAACCCCATAGCCGCATAAACCCC
GAGTCACAGAGATATCTCTCGAAGATCGGTCGCGATGAGAAGATCAACTA
CTGTAACTTCCTTGATACTTTCCAGTAGAACCCTAGCCACCGCCACCATT
AACCACCGTCTCCTCACCACCAATTCCACTTCATACAGCCGATGGCGTTG
CTTCTCCACAGGCTCAGCTGCAGCCGCCGCCACCGCCTCTCTTGGCGTCG
CCGGTGCTCTAGCCTCTGCTGCTGCAATCGCTTCCCTCTCAGCCCAAAGC
GTCTACGCCAAGGAGCCTTTGCCAACGGACCTTGTTCCTAAGGAAGTTGT
TCTCTATCAGTACGAAGCTTGCCCATTTTGCAATAAAGTTAAAGCATTCC
TGGACTACTATGATATACCTTACAAAGTTGTGGAAGTGAATCCAATTAAT
AAGAAAGAGATCAAGTGGTCTGAATATAAAAAGGTGCCTATTTTGATGGT
GGATGGCGAGCAACTGGTCGACTCATCTGCTATAATTGATCAGTTGGACC
AAAAATTAACTCCAAAGAGGAAGGCCGATTCACCCTCTGGCGATGATGAA
GAGAAAAAGTGGCGTGGATGGGTGGATAATCACCTTGTGCATCTGTTGTC
CCCAAACATATATCGCAATACTTCTGAGGCTCTTGAGTCCTTTGACTATA
TCACAAGCAGTGGCAATTTCAGCTTCACAGAAAAACTTACAGCAAAATAT
GCTGGAGCTGCAGCAATGTATTTTGTGTCCAAAAACTGAAAAAAAAAACA
ATATTACTGATGAACGCGCTGCATTATATGAAGCTGCAGAAACATGGGTG
GAGGCTCCTAATGGTAAGGGATTTCCAGGGGGGTTCAAACCTAAATTTAG
CTGAACCTGGCTGTGGTTTGGAGTATAAGAACCA
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