DY304683

Overview
NameDY304683
Unique NameDY304683
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length990
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY304683 vs. ExPASy Swiss-Prot
Match: Y3028_ARATH (Uncharacterized acetyltransferase At3g50280 OS=Arabidopsis thaliana GN=At3g50280 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 2.114e-17
Identity = 55/159 (34.59%), Postives = 81/159 (50.94%), Query Frame = 2 
Query:  182 LKLSVSDLPMLSCHYIQKGCLFTRPPFPIDHXXXXXXXXXXXXXXHFPPLAGRFTT-----DSDGYIYITSNDAGVDFIHKNATVWSVRDILSPV-HVPENVKSFFALDRTVSYEGHYKPILTVQVTELADGVFIGCAMNHALAEGTSFWNFFNTFAEL 640
            + L+  DL +L   Y Q+G LF +P  P  H               + P AGR        D     YI  + +G  FIH  +   SV D+L P   VP+  + F+ ++   S +G  +P+L +QVTE+ DGVFIG   NH +A+G S WNFF T++++
Sbjct:   25 IHLTPFDLNLLYVDYTQRGLLFPKPD-PETHFISRLRTSLSSALDIYFPFAGRLNKVENHEDETVSFYINCDGSGAKFIHAVSDSVSVSDLLRPDGSVPDFFRIFYPMNGVKSIDGLSEPLLALQVTEMRDGVFIGFGYNHMVADGASIWNFFRTWSKI 182
The following BLAST results are available for this feature:
BLAST of DY304683 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y3028_ARATH2.114e-1734.59Uncharacterized acetyltransferase At3g50280 OS=Ara... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAQ9YG08RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304683 ID=DY304683; Name=DY304683; organism=Citrus clementina; type=EST; length=990bp
CTAAACATCAAATTTTCAAAAAGCTTTGCAGCGACAGCGAGCGAGACTGA
GAGAGCTCTCTATCGAGATTAAAAAGAATAAGAAAAAAAAAAAAATGGTG
GCTGCTTCCTCAGCTTTATCAGCTCCTGCTTTGGTCTCAAAGTGCACCGT
TTTGCCAGAACAAAATTCAAATCTCGGGGACTTGAAGCTCTCAGTCTCTG
ACCTTCCAATGCTTTCTTGTCACTACATTCAGAAAGGCTGCCTCTTCACT
CGCCCGCCTTTTCCAATTGACCATTTGATTTCCCTTTTAAAGAAATCTCT
CTCTCAAACTCTCTCTCACTTCCCTCCCCTCGCCGGCCGCTTCACCACCG
ACTCCGACGGCTACATCTACATCACCTCCAACGACGCCGGTGTCGATTTC
ATCCACAAAAACGCTACCGTATGGTCCGTCCGTGACATCCTCAGTCCGGT
TCACGTCCCCGAAAACGTCAAGAGCTTCTTCGCTCTTGATAGAACTGTCA
GTTACGAAGGCCATTACAAGCCGATTTTGACAGTTCAAGTGACGGAACTA
GCAGATGGCGTGTTCATTGGCTGTGCAATGAACCACGCGCTCGCGGAGGG
CACGTCATTTTGGAATTTCTTCAACACCTTTGCTGAATTGACTAAATGAA
TCTAGAAAATCTCCCAGCAACGAGAATTTTCACGTGGATCGGTGTTGGTT
TCTCCGGCACTATCCAAGCTACTTAAATTCTCTCCCTTGAAACCTTTTCC
TCGAAACGAGCGGACTTTTGAGCCCCTCATAACTAAACTGGACATTACCA
CCTCTAATAATTTTCGCTGGGAGTAAAACACCCCTTCCCGACCCACCGCA
AGGGGCCAGTAACGGACTAGGGCCAGAGTTGGAGAAAACTGAAATACAAT
TAATATCAGGGGATATCATCACGTAGTAATAATTTTTTGGGAGCTCCACC
TAACAACAGACGCCTCAATTACCACAAAAATTGTAACTCA
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