DY304686

Overview
NameDY304686
Unique NameDY304686
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length907
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY304686 vs. ExPASy Swiss-Prot
Match: RBOHD_ARATH (Respiratory burst oxidase homolog protein D OS=Arabidopsis thaliana GN=RBOHD PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.830e-36
Identity = 58/87 (66.67%), Postives = 72/87 (82.76%), Query Frame = -1
Query:   14 GFLSQIHNLETLLSQAPNQSVRVGDSRILSQMLSQKLKPTQENNPLRKCYQKIKYFVMDNWQRVSIMLLWLGGV*RVFAYKFVQYRN 274
            GF+  I NLE LL QAPNQSVR+GDSRILSQMLSQKL+P +E+NPL +  +KIKYF++DNWQR+ IM+LWLG    +F YKF+QY+N
Sbjct:  315 GFI-MIENLEMLLLQAPNQSVRMGDSRILSQMLSQKLRPAKESNPLVRWSEKIKYFILDNWQRLWIMMLWLGICGGLFTYKFIQYKN 400          

HSP 2 Score: 54.6842 bits (130), Expect = 2.830e-36
Identity = 26/31 (83.87%), Postives = 29/31 (93.55%), Query Frame = -2
Query:  349 NKLSNIPKQAEEYAAMIMEELDPDIAGYIMI 441
            NKLSNI KQA+EYAA+IMEELDPD AG+IMI
Sbjct:  289 NKLSNIQKQAKEYAALIMEELDPDNAGFIMI 319          
BLAST of DY304686 vs. ExPASy Swiss-Prot
Match: RBOHC_SOLTU (Respiratory burst oxidase homolog protein C OS=Solanum tuberosum GN=RBOHC PE=1 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 1.052e-28
Identity = 50/82 (60.98%), Postives = 64/82 (78.05%), Query Frame = -1
Query:   17 IHNLETLLSQAPNQSV-RVGDSRILSQMLSQKLKPTQENNPLRKCYQKIKYFVMDNWQRVSIMLLWLGGV*RVFAYKFVQYR 259
            I NLE LL QAPNQSV R G+SR LSQMLSQKLK TQE NPL + Y+   YF++DNWQRV ++LLW+G +  +F +K++QY+
Sbjct:  311 IENLEMLLLQAPNQSVQRGGESRNLSQMLSQKLKHTQEPNPLVRWYKSFMYFLLDNWQRVWVLLLWIGIMAVLFTWKYIQYK 392          

HSP 2 Score: 49.2914 bits (116), Expect = 1.052e-28
Identity = 23/31 (74.19%), Postives = 27/31 (87.10%), Query Frame = -2
Query:  349 NKLSNIPKQAEEYAAMIMEELDPDIAGYIMI 441
            N+LS I KQ++EYAAMIMEELDP+  GYIMI
Sbjct:  281 NRLSTIQKQSDEYAAMIMEELDPNNLGYIMI 311          
BLAST of DY304686 vs. ExPASy Swiss-Prot
Match: RBOHD_SOLTU (Respiratory burst oxidase homolog protein D OS=Solanum tuberosum GN=RBOHD PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 2.055e-26
Identity = 44/83 (53.01%), Postives = 61/83 (73.49%), Query Frame = -1
Query:   14 IHNLETLLSQAPNQ-SVRVGDSRILSQMLSQKLKPTQENNPLRKCYQKIKYFVMDNWQRVSIMLLWLGGV*RVFAYKFVQYRN 259
            + NLE LL +AP Q     G +R LS MLS KLKPT E NP+++ Y  +KYF++DNW+RV ++LLW+G +  +FAYK+VQY+N
Sbjct:  260 LENLEMLLLEAPIQPDGEKGLNRNLSHMLSMKLKPTLETNPIKRWYNNLKYFLLDNWRRVWVLLLWIGVMAGLFAYKYVQYKN 342          

HSP 2 Score: 49.2914 bits (116), Expect = 2.055e-26
Identity = 24/31 (77.42%), Postives = 26/31 (83.87%), Query Frame = -2
Query:  349 NKLSNIPKQAEEYAAMIMEELDPDIAGYIMI 441
            NKLSNI KQA EYAA+IMEELD D  GYIM+
Sbjct:  230 NKLSNIQKQAAEYAALIMEELDRDQKGYIML 260          
BLAST of DY304686 vs. ExPASy Swiss-Prot
Match: RBOHB_SOLTU (Respiratory burst oxidase homolog protein B OS=Solanum tuberosum GN=RBOHB PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.202e-25
Identity = 42/83 (50.60%), Postives = 65/83 (78.31%), Query Frame = -1
Query:   17 QIHNLETLLSQAPNQSVRVG-DSRILSQMLSQKLKPTQENNPLRKCYQKIKYFVMDNWQRVSIMLLWLGGV*RVFAYKFVQYR 262
            +++NLETLL QAP+ S+ +  +SR+LS+MLSQKLKPT+E NP ++C +++ YF+ DNW+R+ +M LWL     +F +KF+QY+
Sbjct:  263 ELYNLETLLLQAPSHSMNLSTNSRVLSRMLSQKLKPTKERNPFKRCKRRLDYFIEDNWKRIWVMALWLSICAGLFTWKFIQYK 345          

HSP 2 Score: 41.2022 bits (95), Expect = 2.202e-25
Identity = 19/29 (65.52%), Postives = 22/29 (75.86%), Query Frame = -2
Query:  355 NKLSNIPKQAEEYAAMIMEELDPDIAGYI 441
            NKLS I   ++EYAA+IMEELDP   GYI
Sbjct:  234 NKLSKIQDNSDEYAALIMEELDPGNVGYI 262          
BLAST of DY304686 vs. ExPASy Swiss-Prot
Match: RBOHC_ARATH (Respiratory burst oxidase homolog protein C OS=Arabidopsis thaliana GN=RBOHC PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 4.266e-23
Identity = 38/85 (44.71%), Postives = 60/85 (70.59%), Query Frame = -1
Query:   11 IHNLETLLSQAPNQSV--RVGDSRILSQMLSQKLKPTQENNPLRKCYQKIKYFVMDNWQRVSIMLLWLGGV*RVFAYKFVQYRNT 259
            + +LETLL QA  QSV    G+ + LS M+SQ+LKPT   NPL++ Y+ +++F++DNWQR  +++LW   +  +F YK++QYR +
Sbjct:  292 LESLETLLLQAATQSVITSTGERKNLSHMMSQRLKPTFNRNPLKRWYRGLRFFLLDNWQRCWVIVLWFIVMAILFTYKYIQYRRS 376          

HSP 2 Score: 48.1358 bits (113), Expect = 4.266e-23
Identity = 22/31 (70.97%), Postives = 26/31 (83.87%), Query Frame = -2
Query:  349 NKLSNIPKQAEEYAAMIMEELDPDIAGYIMI 441
            N LS I K+A+EYAA+IMEELDPD  GYIM+
Sbjct:  262 NNLSTIQKRADEYAALIMEELDPDNIGYIML 292          
BLAST of DY304686 vs. ExPASy Swiss-Prot
Match: RBOHA_ARATH (Respiratory burst oxidase homolog protein A OS=Arabidopsis thaliana GN=RBOHA PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 5.927e-22
Identity = 40/87 (45.98%), Postives = 58/87 (66.67%), Query Frame = -1
Query:   17 FGFLSQIHNLETLLSQAPNQSVRVGDSRILSQMLSQKLKPTQENNPLRKCYQKIKYFVMDNWQRVSIMLLWLGGV*RVFAYKFVQYR 277
            +G++  I NLE LL QAP Q VR G+ + LS+MLSQ L   Q  N   +  + +KYF+ DNW+RV +M LW+G +  +F +KF++YR
Sbjct:  282 YGYI-MIENLEILLLQAPMQDVRDGEGKKLSKMLSQNLMVPQSRNLGARFCRGMKYFLFDNWKRVWVMALWIGAMAGLFTWKFMEYR 367          

HSP 2 Score: 46.2098 bits (108), Expect = 5.927e-22
Identity = 22/31 (70.97%), Postives = 26/31 (83.87%), Query Frame = -2
Query:  349 NKLSNIPKQAEEYAAMIMEELDPDIAGYIMI 441
            N+L NI +QA+EYAA+IMEELDP   GYIMI
Sbjct:  257 NELDNIRRQADEYAALIMEELDPYHYGYIMI 287          
BLAST of DY304686 vs. ExPASy Swiss-Prot
Match: RBOHB_ARATH (Respiratory burst oxidase homolog protein B OS=Arabidopsis thaliana GN=RBOHB PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 3.064e-20
Identity = 37/85 (43.53%), Postives = 58/85 (68.24%), Query Frame = -1
Query:   17 QIHNLETLLSQAPNQSVRVGDS---RILSQMLSQKLKPTQENNPLRKCYQKIKYFVMDNWQRVSIMLLWLGGV*RVFAYKFVQYR 262
            ++HNLETLL Q P+QS     S   R L++MLSQKL PT++ NP+++    I YF ++NW+R+ ++ LW+     +F +KF+QY+
Sbjct:  236 ELHNLETLLLQVPSQSNNSPSSANKRALNKMLSQKLIPTKDRNPVKRFAMNISYFFLENWKRIWVLTLWISICITLFTWKFLQYK 320          

HSP 2 Score: 40.4318 bits (93), Expect = 3.064e-20
Identity = 19/29 (65.52%), Postives = 22/29 (75.86%), Query Frame = -2
Query:  355 NKLSNIPKQAEEYAAMIMEELDPDIAGYI 441
            NKLS I +  +EYAA+IMEELD D  GYI
Sbjct:  207 NKLSKIKENVDEYAALIMEELDRDNLGYI 235          
BLAST of DY304686 vs. ExPASy Swiss-Prot
Match: RBOHG_ARATH (Putative respiratory burst oxidase homolog protein G OS=Arabidopsis thaliana GN=RBOHG PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 6.737e-20
Identity = 36/86 (41.86%), Postives = 60/86 (69.77%), Query Frame = -1
Query:   14 IHNLETLLSQAPNQSVRVG----DSRILSQMLSQKLKPTQENNPLRKCYQKIKYFVMDNWQRVSIMLLWLGGV*RVFAYKFVQYRN 259
            + +L+ LL QA  +SV       + + LS ML++ LKPT++ N LR+ Y ++++FV+D+WQRV ++ LWL  +  +FAYK++QY+N
Sbjct:  242 MESLKKLLLQAETKSVSTDINSEERKELSDMLTESLKPTRDPNHLRRWYCQLRFFVLDSWQRVWVIALWLTIMAILFAYKYIQYKN 327          

HSP 2 Score: 45.4394 bits (106), Expect = 6.737e-20
Identity = 22/31 (70.97%), Postives = 25/31 (80.65%), Query Frame = -2
Query:  349 NKLSNIPKQAEEYAAMIMEELDPDIAGYIMI 441
            N LS I  +A+EYAAMIMEELDPD  GYIM+
Sbjct:  212 NHLSCIQNKADEYAAMIMEELDPDHMGYIMM 242          
BLAST of DY304686 vs. ExPASy Swiss-Prot
Match: RBOHA_SOLTU (Respiratory burst oxidase homolog protein A OS=Solanum tuberosum GN=RBOHA PE=1 SV=1)

HSP 1 Score: 49.2914 bits (116), Expect = 5.902e-13
Identity = 26/88 (29.55%), Postives = 50/88 (56.82%), Query Frame = -1
Query:   17 KFGFLSQIHNLETLLSQAPNQSVRVGDSRILSQMLSQKLKPTQENNPLRKCYQKIKYFVMDNWQRVSIMLLWLGGV*RVFAYKFVQYR 280
            + G++ ++  LETLL Q              SQ LSQ L+  ++ +P+R+   K+ Y + +NW+R+ +++LW+  +  +F +KF  Y+
Sbjct:  336 RLGYI-ELWQLETLLLQKDTYLNYSQALSYTSQALSQNLQGLRKRSPIRRMSTKLVYSLQENWKRIWVLVLWILIMIGLFLWKFYLYK 422          

HSP 2 Score: 46.2098 bits (108), Expect = 5.902e-13
Identity = 21/29 (72.41%), Postives = 25/29 (86.21%), Query Frame = -2
Query:  355 NKLSNIPKQAEEYAAMIMEELDPDIAGYI 441
            NKLS + +QAEEYAA+IMEELDP+  GYI
Sbjct:  312 NKLSRLKEQAEEYAALIMEELDPERLGYI 340          
BLAST of DY304686 vs. ExPASy Swiss-Prot
Match: RBOHE_ARATH (Respiratory burst oxidase homolog protein E OS=Arabidopsis thaliana GN=RBOHE PE=2 SV=1)

HSP 1 Score: 45.8246 bits (107), Expect = 3.844e-11
Identity = 28/91 (30.77%), Postives = 52/91 (57.14%), Query Frame = -1
Query:   17 FGFLSQIHNLETLLSQAPNQSVRVGDSRILSQMLSQKLKPTQE----NNPLRKCYQKIKYFVMDNWQRVSIMLLWLGGV*RVFAYKFVQYR 277
            FG++ ++  LETLL Q   +   +  SR LS        P +      + ++KC +K++  ++DNWQR  ++L+W+  +  +F +KF++YR
Sbjct:  329 FGYI-ELWQLETLLLQ---RDAYMNYSRPLSTTSGGVSTPRRNLIRPRHVVQKCRKKLQCLILDNWQRSWVLLVWVMLMAILFVWKFLEYR 415          

HSP 2 Score: 43.5134 bits (101), Expect = 3.844e-11
Identity = 19/29 (65.52%), Postives = 25/29 (86.21%), Query Frame = -2
Query:  355 NKLSNIPKQAEEYAAMIMEELDPDIAGYI 441
            NKL+ + +QAEEYA++IMEELDP+  GYI
Sbjct:  304 NKLAKLKEQAEEYASLIMEELDPENFGYI 332          
The following BLAST results are available for this feature:
BLAST of DY304686 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
RBOHD_ARATH2.830e-3666.67Respiratory burst oxidase homolog protein D OS=Ara... [more]
RBOHC_SOLTU1.052e-2860.98Respiratory burst oxidase homolog protein C OS=Sol... [more]
RBOHD_SOLTU2.055e-2653.01Respiratory burst oxidase homolog protein D OS=Sol... [more]
RBOHB_SOLTU2.202e-2550.60Respiratory burst oxidase homolog protein B OS=Sol... [more]
RBOHC_ARATH4.266e-2344.71Respiratory burst oxidase homolog protein C OS=Ara... [more]
RBOHA_ARATH5.927e-2245.98Respiratory burst oxidase homolog protein A OS=Ara... [more]
RBOHB_ARATH3.064e-2043.53Respiratory burst oxidase homolog protein B OS=Ara... [more]
RBOHG_ARATH6.737e-2041.86Putative respiratory burst oxidase homolog protein... [more]
RBOHA_SOLTU5.902e-1329.55Respiratory burst oxidase homolog protein A OS=Sol... [more]
RBOHE_ARATH3.844e-1130.77Respiratory burst oxidase homolog protein E OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAQ9YG14RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304686 ID=DY304686; Name=DY304686; organism=Citrus clementina; type=EST; length=907bp
TCTACCTCTAGGTGTTTCGGTACTGCACAAACTTGTAGGCAAATACCCTT
CAAACGCCTCCAAGCCACAACAGCATAATCGAAACCCTTTGCCAATTATC
CATCACAAAGTACTTAATCTTCTGATAACATTTTCGTAATGGGTTGTTTT
CTTGGGTTGGCTTCAGCTTCTGGCTCAACATTTGACTCAGAATTCGACTG
TCTCCTACTCTTACAGATTGATTTGGAGCTTGCGACAACAATGTTTCCAG
GTTATGAATCTGCGACAAAAAGCCAAATTTCGTACTCAATTTGAATAAAA
TTTTAAAAAAAGTCCTTCCTTTTTAATCTAATTAATTAGAAAATAAATTA
TCATGATGTATCCGGCAATGTCAGGGTCTAATTCTTCCATAATCATGGCT
GCGTATTCCTCTGCTTGTTTCGGAATGTTGGAGAGCTTGTTTGCAGAAGC
GCTCACACTAATAATCTACGCAGAAAAATAGAAATCATAGATATAAACGT
AAAATGTACCGTATTTGACCAAGTATGTATGCGTAACTTGCTTAAATAAT
TACCTCTTTGACTTCTTCCTCATTGATTCTTCCATCAGCGTCAGTGTCGA
CCCTCATTAAGAATTAAGCAAAAACGGTTAGTACCACTAATTAATCAAGA
AGTAAAAATTGGATGTACACGGCTATAAAATAACAAAAAAGTATAATGAA
ATATCGGGACACCAAAAATAAGAAGACTGGGGTTCCAGGATCCCGCCAAA
AACCTGGTTCCAAAAAACTTTGAACTTGAACTATTTTTAGGGGAAACCCC
CCAATCCTATCCCTTTTTCCAAATTCTCTAAGGGGGGGCTTAAACAAGGC
ATGGCCCTATGGTCCCCCTACCCTTTTCGATTGGGACCCTCTAAGGCTAA
AAGGGTC
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