DY304690
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY304690 vs. ExPASy Swiss-Prot
Match: RN126_MOUSE (RING finger protein 126 OS=Mus musculus GN=Rnf126 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 8.800e-13 Identity = 30/70 (42.86%), Postives = 39/70 (55.71%), Query Frame = 3 Query: 558 PASKAXXXXXXXXXXXXGHVSSECHCAVCKEAFELGNEAREMPCKHIYHEDCILPWLKMRNSCPVCRAEL 767 PA K HV S C VCKE + LG R++PC H++H+ CI+PWL+ +SCPVCR L Sbjct: 206 PADKEKIQALPTVPVTEEHVGSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSL 275
BLAST of DY304690 vs. ExPASy Swiss-Prot
Match: RN126_HUMAN (RING finger protein 126 OS=Homo sapiens GN=RNF126 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.149e-12 Identity = 38/118 (32.20%), Postives = 50/118 (42.37%), Query Frame = 3 Query: 558 PASKAXXXXXXXXXXXXGHVSSECHCAVCKEAFELGNEAREMPCKHIYHEDCILPWLKMRNSCPVCRAELPXXXXXTPEDSSKALSIWWLPGGGFALGKNEGRESGGRNRKKKDFPLG 911 PA K HV S C VCK+ + LG R++PC H++H+ CI+PWL+ +SCPVCR L T L G F+ + S N PLG Sbjct: 204 PADKEKIQALPTVPVTEEHVGSGLECPVCKDDYALGERVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSLTGQNTATNPPG--------LTGVSFSSSSSSSSSSSPSNENATWSPLG 313
BLAST of DY304690 vs. ExPASy Swiss-Prot
Match: RN126_XENTR (RING finger protein 126 OS=Xenopus tropicalis GN=rnf126 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.501e-12 Identity = 26/52 (50.00%), Postives = 36/52 (69.23%), Query Frame = 3 Query: 612 HVSSECHCAVCKEAFELGNEAREMPCKHIYHEDCILPWLKMRNSCPVCRAEL 767 HV S C VCKE + +G R++PC H++H DCI+PWL+ ++CPVCR L Sbjct: 220 HVGSGLECPVCKEDYTVGESVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSL 271
BLAST of DY304690 vs. ExPASy Swiss-Prot
Match: RN126_BOVIN (RING finger protein 126 OS=Bos taurus GN=RNF126 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.344e-12 Identity = 29/70 (41.43%), Postives = 39/70 (55.71%), Query Frame = 3 Query: 558 PASKAXXXXXXXXXXXXGHVSSECHCAVCKEAFELGNEAREMPCKHIYHEDCILPWLKMRNSCPVCRAEL 767 PA K HV S C VCK+ + LG R++PC H++H+ CI+PWL+ +SCPVCR L Sbjct: 207 PADKEKIQALPTVPVTEEHVGSGLECPVCKDDYGLGEHVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSL 276
BLAST of DY304690 vs. ExPASy Swiss-Prot
Match: R126A_XENLA (RING finger protein 126-A OS=Xenopus laevis GN=rnf126-A PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.367e-12 Identity = 26/52 (50.00%), Postives = 36/52 (69.23%), Query Frame = 3 Query: 612 HVSSECHCAVCKEAFELGNEAREMPCKHIYHEDCILPWLKMRNSCPVCRAEL 767 HV S C VCKE + +G R++PC H++H DCI+PWL+ ++CPVCR L Sbjct: 221 HVGSGLECPVCKEDYTVGECVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSL 272
BLAST of DY304690 vs. ExPASy Swiss-Prot
Match: R126B_XENLA (RING finger protein 126-B OS=Xenopus laevis GN=rnf126-B PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 7.450e-12 Identity = 25/52 (48.08%), Postives = 35/52 (67.31%), Query Frame = 3 Query: 612 HVSSECHCAVCKEAFELGNEAREMPCKHIYHEDCILPWLKMRNSCPVCRAEL 767 HV C VCKE + +G R++PC H++H DCI+PWL+ ++CPVCR L Sbjct: 221 HVGFGLECPVCKEDYTVGESVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSL 272
BLAST of DY304690 vs. ExPASy Swiss-Prot
Match: CIP8_ARATH (E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana GN=CIP8 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 9.729e-12 Identity = 29/61 (47.54%), Postives = 37/61 (60.66%), Query Frame = 3 Query: 633 CAVCKEAFELGNEAREMPCKHIYHEDCILPWLKMRNSCPVCRAELPXXXXXTPEDSSKALS 815 CAVCK+ +G +++PC H YH DCI+PWL RNSCPVCR +L E+ K S Sbjct: 257 CAVCKDGMVMGETGKKLPCGHCYHGDCIVPWLGTRNSCPVCRFQLETDDAEYEEERKKRTS 317
BLAST of DY304690 vs. ExPASy Swiss-Prot
Match: RN181_DANRE (E3 ubiquitin-protein ligase rnf181 OS=Danio rerio GN=rnf181 PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 1.271e-11 Identity = 32/71 (45.07%), Postives = 36/71 (50.70%), Query Frame = 3 Query: 558 PASKAXXXXXXXXXXXXGHVSSECHCAVCKEAFELGNEAREMPCKHIYHEDCILPWLKMRNSCPVCRAELP 770 PA+KA C VC FE REMPCKH++H CILPWL NSCP+CR ELP Sbjct: 54 PAAKAVVQSLPVVIISPEQADKGVKCPVCLLEFEEQESVREMPCKHLFHTGCILPWLNKTNSCPLCRLELP 124
BLAST of DY304690 vs. ExPASy Swiss-Prot
Match: RN181_XENLA (E3 ubiquitin-protein ligase rnf181 OS=Xenopus laevis GN=rnf181 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.660e-11 Identity = 33/86 (38.37%), Postives = 42/86 (48.84%), Query Frame = 3 Query: 513 LSQIDLTALSRPENLPASKAXXXXXXXXXXXXGHVSSECHCAVCKEAFELGNEAREMPCKHIYHEDCILPWLKMRNSCPVCRAELP 770 L +D T + PASK + C VC FE G R++PC+H++H CILPWL NSCP+CR ELP Sbjct: 39 LGAVDFTEWDQRLPPPASKKVVESLPKVTVTPEQADAALKCPVCLLEFEEGETVRQLPCEHLFHSACILPWLGKTNSCPLCRHELP 124
BLAST of DY304690 vs. ExPASy Swiss-Prot
Match: RN181_XENTR (E3 ubiquitin-protein ligase rnf181 OS=Xenopus tropicalis GN=rnf181 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.831e-11 Identity = 32/86 (37.21%), Postives = 42/86 (48.84%), Query Frame = 3 Query: 513 LSQIDLTALSRPENLPASKAXXXXXXXXXXXXGHVSSECHCAVCKEAFELGNEAREMPCKHIYHEDCILPWLKMRNSCPVCRAELP 770 L +D T + PA+K + C VC FE G R++PC+H++H CILPWL NSCP+CR ELP Sbjct: 39 LGALDFTEWDQRLPPPAAKKVVESLPKVTVTPEQADAALKCPVCLLEFEEGETVRQLPCEHLFHSSCILPWLGKTNSCPLCRHELP 124 The following BLAST results are available for this feature:
BLAST of DY304690 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >DY304690 ID=DY304690; Name=DY304690; organism=Citrus clementina; type=EST; length=962bpback to top |