DY304702
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY304702 vs. ExPASy Swiss-Prot
Match: NFXL1_XENLA (NF-X1-type zinc finger protein NFXL1 OS=Xenopus laevis GN=nfxl1 PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 4.997e-37 Identity = 74/200 (37.00%), Postives = 108/200 (54.00%), Query Frame = 2 Query: 308 IKPSDPTWHCSTLCYSIFHLICIQSWARQXXXXXXXXXXXXXPITAEKAAESS-TWNCPKCRSQYSKSQIPKKYLCFCGKLEDPYSEDPWILPHSCNEICNRPLQNNCGHFCLMLCHPGPCLPCPKLVYSTCFLRKFQEVP-PCGFQSFSCNKIVPNPLIVRLINVFNFARRGLALLENHGRGTCARCGKIEKKRGFFGK 901 +K + W CS C+ IFH+ CIQ WA+ P+T + + W CPKCR +Y +S+ P +Y C+CGK+EDP DPW++PHSC ++C R + CGH CL+LCHPGPC PCPK+V TCF +K + VP C + +SC + L+ + N +G C C ++ K++ G+ Sbjct: 170 VKRNQAVWSCSG-CFCIFHMPCIQKWAKDSVFLVSS------PLTDDDFEKKDYPWPCPKCRYEYKRSETPCRYYCYCGKVEDP-PLDPWLVPHSCGQVCEREFKPTCGHKCLLLCHPGPCPPCPKMVTITCFCQKAKPVPRRCSAKEWSCQQPCRKTLMCKQHKCENPCH----------KGDCLPCPRVSKQKCLCGR 351
BLAST of DY304702 vs. ExPASy Swiss-Prot
Match: NFXL1_HUMAN (NF-X1-type zinc finger protein NFXL1 OS=Homo sapiens GN=NFXL1 PE=1 SV=2) HSP 1 Score: 151.369 bits (381), Expect = 7.216e-36 Identity = 72/200 (36.00%), Postives = 106/200 (53.00%), Query Frame = 2 Query: 308 IKPSDPTWHCSTLCYSIFHLICIQSWARQXXXXXXXXXXXXXPITAEKAAESSTWNCPKCRSQYSKSQIPKKYLCFCGKLEDPYSEDPWILPHSCNEICNRPLQNNCGHFCLMLCHPGPCLPCPKLVYSTCFLRKFQEVP-PCGFQSFSCNKIVPNPLIVRLINVFNFARRGLALLENH-GRGTCARCGKIEKKRGFFGK 901 +K + W CS C+ IFH+ CIQ WA+ + + W CPKCR +Y +S+ P +Y C+CGK+EDP DPW++PHSC ++C R + CGH CL+LCHPGPC PCPK+V +TC+ +K + +P C + +SC L+ G EN G+C C ++ +++ GK Sbjct: 167 VKRNQAVWSCSG-CFCIFHMPCIQKWAKDSQFLVSSVTDD------DFGKKDCPWPCPKCRFEYKRSETPSRYYCYCGKVEDP-PLDPWLVPHSCGQVCEREFKPPCGHKCLLLCHPGPCPPCPKMVTTTCYCKKAKPIPRRCSAKEWSCQLPCGQKLLC-----------GQHKCENPCHAGSCQPCPRVSRQKCVCGK 347
BLAST of DY304702 vs. ExPASy Swiss-Prot
Match: NFX1_BOVIN (Transcriptional repressor NF-X1 OS=Bos taurus GN=NFX1 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 1.302e-24 Identity = 55/147 (37.41%), Postives = 76/147 (51.70%), Query Frame = 2 Query: 302 ERIKPSDPTWHCSTLCYSIFHLICIQSWARQXXXXXXXXXXXXXPITAEKAAESSTWNCPKCRSQYSKSQIPKKYLCFCGKLEDP-YSEDPWILPHSCNEICNRPLQN-NCGHFCLMLCHPGPCLPCPKLVYSTCFLRKFQEVPPCG 736 E ++ + P W C + CY +FHL CI+ WAR A +A S W CP C Q + +P Y CFCGK+++P +S + +PHSC E+C R +C H C +LCHPGPC PCP + TC + + CG Sbjct: 360 ELVRVTAPVWSCQS-CYHVFHLNCIKKWARSP---------------ASQADGQSGWRCPAC--QNVSAHVPNTYTCFCGKVKNPEWSRNE--IPHSCGEVCRRKQPGQDCPHSCNLLCHPGPCPPCPAFMTKTCECGRTRHTVRCG 486 HSP 2 Score: 23.0978 bits (48), Expect = 1.302e-24 Identity = 9/32 (28.12%), Postives = 12/32 (37.50%), Query Frame = 1 Query: 763 CSKPFNCTTHKCFQFCQEGLGPP*KPRAGYMC 858 C NC H C + C G P + +C Sbjct: 497 CDNILNCGQHHCAELCHGGPCQPCRVILNQVC 528
BLAST of DY304702 vs. ExPASy Swiss-Prot
Match: NFX1_HUMAN (Transcriptional repressor NF-X1 OS=Homo sapiens GN=NFX1 PE=1 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 1.695e-24 Identity = 54/147 (36.73%), Postives = 76/147 (51.70%), Query Frame = 2 Query: 302 ERIKPSDPTWHCSTLCYSIFHLICIQSWARQXXXXXXXXXXXXXPITAEKAAESSTWNCPKCRSQYSKSQIPKKYLCFCGKLEDP-YSEDPWILPHSCNEICNRPLQN-NCGHFCLMLCHPGPCLPCPKLVYSTCFLRKFQEVPPCG 736 E ++ + P W C + CY +FHL CI+ WAR A +A S W CP C Q + +P Y CFCGK+++P +S + +PHSC E+C + +C H C +LCHPGPC PCP + TC + + CG Sbjct: 363 ELVRVTAPVWSCQS-CYHVFHLNCIKKWARSP---------------ASQADGQSGWRCPAC--QNVSAHVPNTYTCFCGKVKNPEWSRNE--IPHSCGEVCRKKQPGQDCPHSCNLLCHPGPCPPCPAFMTKTCECGRTRHTVRCG 489 HSP 2 Score: 23.8682 bits (50), Expect = 1.695e-24 Identity = 8/23 (34.78%), Postives = 10/23 (43.48%), Query Frame = 1 Query: 763 CSKPFNCTTHKCFQFCQEGLGPP 831 C NC H+C + C G P Sbjct: 500 CENILNCGQHQCAELCHGGQCQP 522
BLAST of DY304702 vs. ExPASy Swiss-Prot
Match: NFX1_MOUSE (Transcriptional repressor NF-X1 OS=Mus musculus GN=Nfx1 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.195e-22 Identity = 53/147 (36.05%), Postives = 74/147 (50.34%), Query Frame = 2 Query: 302 ERIKPSDPTWHCSTLCYSIFHLICIQSWARQXXXXXXXXXXXXXPITAEKAAESSTWNCPKCRSQYSKSQIPKKYLCFCGKLEDP-YSEDPWILPHSCNEICNRPLQN-NCGHFCLMLCHPGPCLPCPKLVYSTCFLRKFQEVPPCG 736 E ++ + P W C + C+ +FHL CI+ WAR A A S W CP C Q + +P Y CFCGK+++P +S + +PHSC E+C + +C H C +LCHPGPC PCP TC + + CG Sbjct: 357 ELVQVTAPVWSCQS-CFHVFHLNCIKKWARSP---------------ASHADGQSGWRCPAC--QNVSAHVPNTYTCFCGKVKNPEWSRNE--IPHSCGEVCRKKQPGQDCPHSCNLLCHPGPCPPCPAFTTKTCECGRTRHTVRCG 483
BLAST of DY304702 vs. ExPASy Swiss-Prot
Match: FAP1H_SCHPO (FKBP12-associated protein 1 homolog OS=Schizosaccharomyces pombe GN=fap1 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 9.468e-20 Identity = 49/137 (35.77%), Postives = 68/137 (49.64%), Query Frame = 2 Query: 302 ERIKPSDPTWHCSTLCYSIFHLICIQSWARQXXXXXXXXXXXXXPITAEKAAESSTWNCPKCRSQYSKSQIPKKYLCFCGKLEDPYSEDPWILPHSCNEICNRPLQNNCGHFCLMLCHPGPCLPCPKLVYSTCFLRK 712 + I PS W C T CY +FHL CI+ W + + E+ E + W CP C+S +++ + YLC+CGK E P ++PHSC + C + +C H C +LCHPGPC PC V C K Sbjct: 202 DTINPSTSIWSCGT-CYHVFHLSCIRKWCKN---------------SIEQRNEDA-WRCPYCQSNQTETSL--HYLCWCGKQEKPEFVKN-LVPHSCGDPCGKTRGQDCEHPCPLLCHPGPCPPCTATVEKFCLCGK 318
BLAST of DY304702 vs. ExPASy Swiss-Prot
Match: STC_DROME (Protein shuttle craft OS=Drosophila melanogaster GN=stc PE=1 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 1.386e-19 Identity = 50/147 (34.01%), Postives = 65/147 (44.22%), Query Frame = 2 Query: 302 ERIKPSDPTWHCSTLCYSIFHLICIQSWARQXXXXXXXXXXXXXPITAEKAAESSTWNCPKCRSQYSKSQIPKKYLCFCGKLEDPYSEDPWILPHSCNEICNRPLQNNCGHFCLMLCHPGPCLPCPKLVYSTCFLRKFQEVPPCGFQ 742 E IK PTW C CY + HL C +WA + W CP C++ +P+ YLCFCGKL++P L HSC E+C R C H C +LCHPGPC PC V +C + + C + Sbjct: 391 EAIKSHQPTWSCRN-CYHMLHLKCTITWA-------------------SSSKSEVGWRCPACQNVLQ--DLPRDYLCFCGKLKNP-PVSRTELAHSCGEVCCRI--EGCSHACTLLCHPGPCPPCQANVVRSCGCGRSTKTMQCAMK 512 HSP 2 Score: 23.8682 bits (50), Expect = 1.386e-19 Identity = 8/19 (42.11%), Postives = 9/19 (47.37%), Query Frame = 1 Query: 763 CSKPFNCTTHKCFQFCQEG 819 C K NC H+C C G Sbjct: 521 CDKLLNCGEHRCQAECHSG 539
BLAST of DY304702 vs. ExPASy Swiss-Prot
Match: NFX1_DICDI (Transcriptional repressor NF-X1 homolog OS=Dictyostelium discoideum GN=nfx1 PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.030e-19 Identity = 46/129 (35.66%), Postives = 65/129 (50.39%), Query Frame = 2 Query: 302 ERIKPSDPTWHCSTLCYSIFHLICIQSWARQXXXXXXXXXXXXXPITAEKAAESSTWNCPKCRSQYSKSQIPKKYLCFCGKLEDPYSEDPWILPHSCNEICNR-PLQNNCGHFCLMLCHPGPCLPCPKL 685 E + + W CS C+++FH CI+ W+ + +T E W CP CR + + CFCGK++DP +P+ L HSC E+C + ++NC H C MLCHPGPCL C L Sbjct: 371 ENVGKNAVIWSCSQ-CFTMFHSSCIKQWSSKS-------------VTTE-----GKWKCPGCRYNHEVKPEHFQPACFCGKVKDP-QYNPYHLAHSCGEVCGKLRAKSNCPHSCTMLCHPGPCLNCSSL 479 HSP 2 Score: 25.0238 bits (53), Expect = 3.030e-19 Identity = 9/23 (39.13%), Postives = 11/23 (47.83%), Query Frame = 1 Query: 763 CSKPFNCTTHKCFQFCQEGLGPP 831 C K +C H+C Q C G P Sbjct: 509 CEKLLSCGNHRCQQQCHSGSCSP 531
BLAST of DY304702 vs. ExPASy Swiss-Prot
Match: NFX1_CAEEL (Transcriptional repressor NF-X1 homolog OS=Caenorhabditis elegans GN=tag-182 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 3.046e-18 Identity = 59/202 (29.21%), Postives = 80/202 (39.60%), Query Frame = 2 Query: 305 RIKPSDPTWHCSTLCYSIFHLI--CIQSWARQXXXXXXXXXXXXXPITAEKAAESSTWNCPKCRSQYSKSQIPKKYLCFCGKLEDPYSEDPWILPHSCNEICNRPLQNNCGHFCLMLCHPGPCLPCPKLVYSTCFLRKFQEVPPCGF-QSFSCNKIVPNPLIVRLINVFNFARRGLALLENHGRGTCARCGKIEKKRGFFGK 901 RI W C T CY IFH+ CI WAR ++ ++TW CP C+++ +P Y CFCG++ +P + PHSC E C + C H C LCHPGPC+ C +C K ++ CG Q C + L N G C C I ++ F GK Sbjct: 241 RITTRQGVWSCKT-CYHIFHISTGCITDWAR----------------SSRDKEGANTWRCPTCQTE--NETMPYNYYCFCGRMRNPNFRVGEV-PHSCGETCGGARKFGCPHPCTELCHPGPCIECKLFTTKSCNCGKTKKSVRCGSDQEVMCETVCGKQLSCGQHNCERICH----------SGDCGECTVILEQDCFCGK 412 The following BLAST results are available for this feature:
BLAST of DY304702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY304702 ID=DY304702; Name=DY304702; organism=Citrus clementina; type=EST; length=946bpback to top |