DY304706
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY304706 vs. ExPASy Swiss-Prot
Match: D42E1_MACFA (Short chain dehydrogenase/reductase family 42E member 1 OS=Macaca fascicularis GN=SDR42E1 PE=2 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 7.532e-51 Identity = 118/278 (42.45%), Postives = 165/278 (59.35%), Query Frame = 3 Query: 75 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGDVVSKIDVEKAARGVD--CVFHVASYGMSGKEMLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGHPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLCKLGLVPF*NC*TSVKTDWIYVDNLVLALNMASKGLLDDIPGQKRRSNTFRANILLNRMGFPPKLFNFLEPFFKYLG 902 +T L+TGG G+ G L L ++G + + FD+ + + I G+ IQGD+ D+EKA + D CVFH+ASYGMSG+E L ++EVNI GT ++++AC + RLVY ST+NV+FGG+ I NG+ESLPY P+ H D Y R+KS+AE+ VL++NG P + + L TCA+RPA IYGPGE+RHLPRIVS + GL F ++++VDNLV A +AS+ L D + + G P F F P + LG Sbjct: 9 ETVLITGGGGYFGFRLGCALNQKGVHVI-LFDISSPAE----TIPEGIKFIQGDICHLSDIEKAFQDADITCVFHIASYGMSGREQLNRNLIEEVNIGGTDNILQACQRRRVPRLVYTSTFNVIFGGQVIRNGDESLPYLPLHLHPDHYSRTKSIAEKKVLEANGTPLDRGD-GVLRTCALRPAGIYGPGEQRHLPRIVSYIEKGLFKFVYGDPRSLVEFVHVDNLVQAHILASEALRAD------KGHIASGQPYFISDGRPVNNFEFFRPLVEGLG 274
BLAST of DY304706 vs. ExPASy Swiss-Prot
Match: D42E1_MOUSE (Short chain dehydrogenase/reductase family 42E member 1 OS=Mus musculus GN=Sdr42e1 PE=2 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 3.738e-50 Identity = 122/279 (43.73%), Postives = 166/279 (59.50%), Query Frame = 3 Query: 75 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGDVVSKIDVEKA---ARGVDCVFHVASYGMSGKEMLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGHPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLCKLGLVPF*NC*TSVKTDWIYVDNLVLALNMASKGLLDDIPGQKRRSNTFRANILLNRMGFPPKLFNFLEPFFKYLG 902 +T L+TGG G+ G L L ++GA +V FD+ P +L G+ + GD+ DVE A A V CVFHVASYGMSG+E L +++EVN+ GT +++ ACLE G+ RLVY ST+NV+FGG+ I NG+ESLPY P+ H D Y R+KS+AE+ VL++NG FK+ + L TCA+RPA IYG GE+RHLPRIVS + GL F ++++VDNL A +AS+ L D + + G P F F P + LG Sbjct: 9 ETVLITGGGGYFGFRLGCALNQKGA-RVILFDI--TQPAQNL--PEGIKFVCGDIRCLADVETAFQDAEKVACVFHVASYGMSGREQLNKTQIEEVNVGGTENILRACLERGVPRLVYTSTFNVIFGGQVIRNGDESLPYLPLHLHPDHYSRTKSIAEKKVLEANGLAFKQGD-GILRTCAIRPAGIYGAGEQRHLPRIVSYIERGLFRFVYGDPQSLVEFVHVDNLAKAHILASEALKAD------KGHVASGQPYFISDGRPVNNFEFFRPLVEGLG 275
BLAST of DY304706 vs. ExPASy Swiss-Prot
Match: D42E1_HUMAN (Short chain dehydrogenase/reductase family 42E member 1 OS=Homo sapiens GN=SDR42E1 PE=2 SV=2) HSP 1 Score: 195.282 bits (495), Expect = 4.133e-49 Identity = 116/278 (41.73%), Postives = 161/278 (57.91%), Query Frame = 3 Query: 75 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGDVVSKIDVEKAARGVD--CVFHVASYGMSGKEMLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGHPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLCKLGLVPF*NC*TSVKTDWIYVDNLVLALNMASKGLLDDIPGQKRRSNTFRANILLNRMGFPPKLFNFLEPFFKYLG 902 ++ L+TGG G+ G L L + G + + FD+ + + I G+ IQGD+ DVEKA + D CVFH+ASYGMSG+E L + EVN+ GT ++++ C + RLVY ST+NV+FGG+ I NG+ESLPY P+ H D Y R+KS+AEQ VL++N P + + L TCA+RPA IYGPGE+RHLPRIVS + GL F ++++VDNLV A +AS+ L D + + G P F F P + LG Sbjct: 9 ESVLITGGSGYFGFRLGCALNQNGVHVI-LFDISSPAQ----TIPEGIKFIQGDIRHLSDVEKAFQDADVTCVFHIASYGMSGREQLNRNLIKEVNVRGTDNILQVCQRRRVPRLVYTSTFNVIFGGQVIRNGDESLPYLPLHLHPDHYSRTKSIAEQKVLEANATPLDRGD-GVLRTCALRPAGIYGPGEQRHLPRIVSYIEKGLFKFVYGDPRSLVEFVHVDNLVQAHILASEALRAD------KGHIASGQPYFISDGRPVNNFEFFRPLVEGLG 274
BLAST of DY304706 vs. ExPASy Swiss-Prot
Match: D42E1_BOVIN (Short chain dehydrogenase/reductase family 42E member 1 OS=Bos taurus GN=SDR42E1 PE=2 SV=2) HSP 1 Score: 194.897 bits (494), Expect = 5.398e-49 Identity = 115/278 (41.37%), Postives = 161/278 (57.91%), Query Frame = 3 Query: 75 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGDVVSKIDVEKAARGVD--CVFHVASYGMSGKEMLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGHPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLCKLGLVPF*NC*TSVKTDWIYVDNLVLALNMASKGLLDDIPGQKRRSNTFRANILLNRMGFPPKLFNFLEPFFKYLG 902 +T L+TGG G+ G L L G + + FD+ + I G+ I GD+ D+E A +GVD CVFH+ASYGMSG+E L ++E+N+ GT ++++AC G+ RLVY ST+NV+FGG+ I NG+ESLPY P+ H D Y R+KS+AE+ VL +NG ++ L TCA+RPA IYGPGE+RHLPRIVS + GL F ++++VDNLV A +AS+ L + + + G P F F P + LG Sbjct: 9 ETVLITGGGGYFGFRLGCALNLLGVHVI-LFDISHPAQ----TIPEGIRFILGDIRCLSDIENAFQGVDVACVFHIASYGMSGREQLNRSLIEEINVGGTDNILQACRRRGVPRLVYTSTFNVIFGGQVIRNGDESLPYLPLHLHPDHYSRTKSIAEKKVLSANGTALERGG-GVLSTCALRPAGIYGPGEQRHLPRIVSYIEKGLFRFVYGDPKSLVEFVHVDNLVQAHILASEAL------KANKGHIAAGQPYFISDGRPVNNFEFFRPLVEGLG 274
BLAST of DY304706 vs. ExPASy Swiss-Prot
Match: D42E1_DANRE (Short chain dehydrogenase/reductase family 42E member 1 OS=Danio rerio GN=sdr42e1 PE=2 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 7.049e-49 Identity = 115/275 (41.82%), Postives = 162/275 (58.91%), Query Frame = 3 Query: 78 TFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGDVVSKIDVEKAARGVDCVFHVASYGMSGKEMLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGHPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLCKLGLVPF*NC*TSVKTDWIYVDNLVLALNMASKGLLDDIPGQKRRSNTFRANILLNRMGFPPKLFNFLEPFFKYLG 902 +FL+TGG G+ G L L++ + +V FD+ + P L G+ ++ D+ VEKA RG CVFH+ASYGMSG+E L ++EVN+ GT +++ AC+ + RL+Y ST+NVVFGG+EI NG+ESLPY P+ H D Y R+KS+AE VLK+N N+ L TCA+RPA IYGPGE+RHLPRIVS + G+ F ++++VDNLV A +A+ L + + F ++ G P F F P + LG Sbjct: 9 SFLITGGGGYFGFRLACALLKTSS-KVVLFDV--SPPIQDL--PEGLIFMRADIRDYAQVEKAVRGSHCVFHIASYGMSGREQLNRKLIEEVNVKGTENILRACVAHSVPRLIYTSTFNVVFGGQEIKNGDESLPYLPLHLHPDHYSRTKSIAEMQVLKANNLAL-SNSTGVLRTCALRPAGIYGPGEQRHLPRIVSYIENGIFRFVYGDPDSLVEFVHVDNLVSAHLLAADALTEKQQCRAAGQAYFISD------GRPVNNFEFFRPLVEGLG 271
BLAST of DY304706 vs. ExPASy Swiss-Prot
Match: D42E1_XENLA (Short chain dehydrogenase/reductase family 42E member 1 OS=Xenopus laevis GN=sdr42e1 PE=2 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 3.499e-48 Identity = 105/238 (44.12%), Postives = 149/238 (62.61%), Query Frame = 3 Query: 75 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGDVVSKIDVEKAARGVDCVFHVASYGMSGKEMLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGHPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLCKLGLVPF*NC*TSVKTDWIYVDNLVLALNMASKGLLDD 788 +T ++TGG G+ G L L +G + + FD+R P L G+H +QGDV S +E G CVFH ASYGMSGKE L +++ +N+ GT ++I+AC+ + RLVY ST+NV+FGG+ I +G+ESLPY P D VD+Y R+K+VAE VLK N KNN L TC++R A IYGPGE+RHLPRI+S + G+ F + +++VDNL+ A +A++ L + Sbjct: 9 ETVVITGGGGYFGHRLGCTLHEKGVHVI-LFDIR--KPDQEL--PEGIHFVQGDVRSLSQLEDVVAGASCVFHTASYGMSGKEQLHRQKIEAINVRGTENIIQACINTNVPRLVYTSTFNVIFGGQTIRDGDESLPYLPQDAFVDNYSRTKTVAEMFVLKMNNQEL-KNNSGFLRTCSLRAAGIYGPGEQRHLPRIISALEKGMFLF-VYGDNPLVQFVHVDNLISAHILAAEALTSE 239
BLAST of DY304706 vs. ExPASy Swiss-Prot
Match: D42E2_HUMAN (Putative short chain dehydrogenase/reductase family 42E member 2 OS=Homo sapiens GN=SDR42E2 PE=3 SV=3) HSP 1 Score: 180.644 bits (457), Expect = 1.053e-44 Identity = 112/274 (40.88%), Postives = 152/274 (55.47%), Query Frame = 3 Query: 84 LVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGDVVSKIDVEKAARGVDCVFHVASYGMSGKEMLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNE-SLPYFPIDEHVDSYGRSKSVAEQLVLKSNGHPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLCKLGLVPF*NC*TSVKTDWIYVDNLVLALNMASKGLLDDIPGQKRRSNTFRANILLNRMGFPPKLFNFLEPFFKYLG 902 LVTGG G++G +L L + G V D R W ++ IQ DV + + +A GVDCVFHVASYGMSG E LQ +++ +N+ GT VI+ C+ + RL+Y ST NV FGGK I G+E S+PYFP+DEHVD Y R+K++A+QL L +NG P L TC +RP IYGP E+RHLPR+ K L F + +W++V NLV A +A++ L G + N G LF ++ P F+ LG Sbjct: 37 LVTGGGGYLGFSLGSHLAKSGT-SVILLD-RRRPQWE---LSPETKFIQADVRDEEALYRAFEGVDCVFHVASYGMSGAEKLQKEQIESINVGGTKLVIDVCVRRRVPRLIYTSTVNVAFGGKPIEQGDEDSVPYFPLDEHVDHYSRTKAIADQLTLMANGMPLPGGG--TLRTCVLRPPGIYGPEEQRHLPRVAGHIKKRLFMFRFGDHKARMNWVHVHNLVQAHVLAAEA-LTTAKGYVASGQAYYIN-----DGESVNLFEWMAPLFEKLG 297
BLAST of DY304706 vs. ExPASy Swiss-Prot
Match: HSDD1_ARATH (3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1 OS=Arabidopsis thaliana GN=3BETAHSD/D1 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 5.807e-27 Identity = 93/284 (32.75%), Postives = 141/284 (49.65%), Query Frame = 3 Query: 84 LVTGGLGHVGSALCLELVRRGAYQVRAFDL---------RTNSPWSHLLINHGVHCIQGDVVSKIDVEKAARGVDCVFHVASYGMS-GKEMLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKE-IVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGHPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLCKLGLVPF*NC*TSVKTDWIYVDNLVLALNMASKGLLDDIPGQKRRSNTFRANILLNRMGFPPKLFNFLEPFFKYLG 902 +VTGG G L LVR + VR DL + + V + D+ +K V K +G + VFH+A+ S LQ+ VN+ GT +VI+AC+E G++RL+Y S+ +VVF G +N +ESLPY P +H DSY +K+ E L+LK+NG R L TC +RP++I+GPG++ +P +V+ + G F S D+ YV+N+V A A + L G+ +A + N P K + F+ + LG Sbjct: 13 VVTGGRGFAARHLVEMLVRYQMFHVRIADLAPAIVLNPHEETGILGEAIRSGRVQYVSADLRNKTQVVKGFQGAEVVFHMAAPDSSINNHQLQYS----VNVQGTTNVIDACIEVGVKRLIYTSSPSVVFDGVHGTLNADESLPYPP--KHNDSYSATKAEGEALILKANG-------RSGLLTCCIRPSSIFGPGDKLMVPSLVTAARAGKSKFIIGDGSNFYDFTYVENVVHAHVCAERALASG--GEVCAKAAGQAYFITNME--PIKFWEFMSQLLEGLG 279
BLAST of DY304706 vs. ExPASy Swiss-Prot
Match: HSDD2_ARATH (3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 OS=Arabidopsis thaliana GN=3BETAHSD/D2 PE=2 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 1.430e-25 Identity = 86/243 (35.39%), Postives = 128/243 (52.67%), Query Frame = 3 Query: 84 LVTGGLGHVGSALCLELVRRGAYQVRAFDLRT---------NSPWSHLLINHGVHCIQGDVVSKIDVEKAARGVDCVFHVASYGMS-GKEMLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKE-IVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGHPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLCKLGLVPF*NC*TSVKTDWIYVDNLVLALNMASKGL 779 +VTGG G L LVR + VR DL N L + V I D+ K V KA +G + VFH+A+ S LQ+ VN+ GT +VI+AC++ G++RL+Y S+ +VVF G I+NG ES+ Y PI +H DSY +K+ E+L++K+NG R L TC +RP++I+GPG+ +P +V+ + G F + D+ YV+N+ A A + L Sbjct: 13 VVTGGRGFAARHLVEMLVRYEMFCVRIADLAPAIMLDPQEGNGVLDEGLRSGRVQYISADLRDKSQVVKAFQGAEVVFHMAAPDSSINNHQLQYS----VNVQGTQNVIDACVDVGVKRLIYTSSPSVVFDGVHGILNGTESMAY-PI-KHNDSYSATKAEGEELIMKANG-------RNGLLTCCIRPSSIFGPGDRLLVPSLVAAARAGKSKFIIGDGNNLYDFTYVENVAHAHVCAERAL 242
BLAST of DY304706 vs. ExPASy Swiss-Prot
Match: NSDHL_RAT (Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating OS=Rattus norvegicus GN=Nsdhl PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.933e-22 Identity = 80/244 (32.79%), Postives = 122/244 (50.00%), Query Frame = 3 Query: 57 NEGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGDVVSKIDVEKAARGVDCVFHVASYGMSGKEMLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGHPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLCKLGLVPF*NC*TSVKTDWIYVDNLVLALNMASKGLLDD 788 NE + K V GG G +G + +L+ RG Y V FD+R N V GD+ ++ D+ A +GV VFH AS + F RV N GT VIE C E G+Q+L+ S+ +VVF G +I NG E LPY + +D Y +K + E+ VL +N + +K T A+RP I+GP + + +P ++ + G + F D+ +V+N+V +A++ L D Sbjct: 21 NEVSKAKKCTVIGGSGFLGQHMVEQLLSRG-YAVNVFDVRQGFD------NPRVQFFIGDLCNQQDLYPALKGVSTVFHCASPPSNSNNKELFYRV---NSTGTKTVIETCKEAGVQKLILTSSASVVFEGVDIKNGTEDLPY--AMKPIDYYTETKILQERAVLDAN------DPKKNFLTAAIRPHGIFGPRDPQLVPVLIDAARKGKMKFMIGNGKNLVDFTFVENVVHGHILAAEHLSRD 246 The following BLAST results are available for this feature:
BLAST of DY304706 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY304706 ID=DY304706; Name=DY304706; organism=Citrus clementina; type=EST; length=911bpback to top |