DY304707
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY304707 vs. ExPASy Swiss-Prot
Match: KCAB_ORYSJ (Probable voltage-gated potassium channel subunit beta OS=Oryza sativa subsp. japonica GN=KOB1 PE=1 SV=2) HSP 1 Score: 439.113 bits (1128), Expect = 1.759e-122 Identity = 211/258 (81.78%), Postives = 232/258 (89.92%), Query Frame = 1 Query: 91 MQYKHLGRSGLRVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNMLSRHKVEAEYLPLYSNYGIGLTTWSPLASGVLTGKYNKGSIPPDSRFALEN*KILLAQHWSMMC*KKVNQLKQIA 864 MQYK+LGRSGLRVSQLSYGAWV+FGNQLDVKEAK+LLQ CRD GVNFFDNAEVYANGRAEEIMGQA+R+LGW+RSD+VVSTK+FWGGQGPNDKGLSRKHIVEG + SLKRLDMDYVDV+YCHRPD +TP+EETVRAMN+VID G AFYWGTSEWSAQQITEAW +A RLDLVGPIVEQPEYN+ SRHKVE+E+LPLYS YG+GLTTWSPLASGVLTGKY KG+IP DSRFALEN K L + +KVN LK IA Sbjct: 1 MQYKNLGRSGLRVSQLSYGAWVTFGNQLDVKEAKALLQACRDAGVNFFDNAEVYANGRAEEIMGQAMRDLGWRRSDVVVSTKLFWGGQGPNDKGLSRKHIVEGLRGSLKRLDMDYVDVVYCHRPDATTPVEETVRAMNWVIDHGMAFYWGTSEWSAQQITEAWSVANRLDLVGPIVEQPEYNLFSRHKVESEFLPLYSTYGLGLTTWSPLASGVLTGKYAKGNIPADSRFALENYKNLANRSLVDDTLRKVNGLKPIA 258
BLAST of DY304707 vs. ExPASy Swiss-Prot
Match: KCAB2_XENLA (Voltage-gated potassium channel subunit beta-2 OS=Xenopus laevis GN=kcnab2 PE=2 SV=1) HSP 1 Score: 272.707 bits (696), Expect = 2.180e-72 Identity = 124/231 (53.68%), Postives = 174/231 (75.32%), Query Frame = 1 Query: 97 YKHLGRSGLRVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNMLSRHKVEAEYLPLYSNYGIGLTTWSPLASGVLTGKYNKGSIPPDSRFALE 789 Y++LG+SGLRVS L G WV+FG Q+ + A+ L+ D+G+N FD AEVYA G+AE ++G I++ GW+RS +V++TKIFWGG+ ++GLSRKHI+EG KASL+RL +DYVDV++ +RPD +TP+EETVRAM +VI++G A YWGTS WS+ +I EA+ +A + +L+ PI EQ EY+M R KVE + L+ G+G TWSPLA G+++GKY+ G IPP SR +L+ Sbjct: 39 YRNLGKSGLRVSCLGLGTWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLDYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYD-GGIPPYSRASLK 268
BLAST of DY304707 vs. ExPASy Swiss-Prot
Match: KCAB2_BOVIN (Voltage-gated potassium channel subunit beta-2 OS=Bos taurus GN=KCNAB2 PE=1 SV=1) HSP 1 Score: 272.707 bits (696), Expect = 2.180e-72 Identity = 137/290 (47.24%), Postives = 197/290 (67.93%), Query Frame = 1 Query: 97 YKHLGRSGLRVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNMLSRHKVEAEYLPLYSNYGIGLTTWSPLASGVLTGKYNKGSIPPDSRFALE-----N*KILLAQHWSMMC*KKVNQLKQIAMN*AWPLPKLGNCLWGFKSKWNPPLKLGA 951 Y++LG+SGLRVS L G WV+FG Q+ + A+ L+ D+G+N FD AEVYA G+AE ++G I++ GW+RS +V++TKIFWGG+ ++GLSRKHI+EG KASL+RL ++YVDV++ +RPD +TP+EETVRAM +VI++G A YWGTS WS+ +I EA+ +A + +L+ PI EQ EY+M R KVE + L+ G+G TWSPLA G+++GKY+ G IPP SR +L+ KIL + K+ +L+ IA LP+L W +++ + LGA Sbjct: 39 YRNLGKSGLRVSCLGLGTWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDSG-IPPYSRASLKGYQWLKDKILSEEGRRQQA--KLKELQAIAERLGCTLPQLA-IAWCLRNEGVSSVLLGA 324
BLAST of DY304707 vs. ExPASy Swiss-Prot
Match: KCAB2_RAT (Voltage-gated potassium channel subunit beta-2 OS=Rattus norvegicus GN=Kcnab2 PE=1 SV=1) HSP 1 Score: 272.322 bits (695), Expect = 2.847e-72 Identity = 137/290 (47.24%), Postives = 197/290 (67.93%), Query Frame = 1 Query: 97 YKHLGRSGLRVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNMLSRHKVEAEYLPLYSNYGIGLTTWSPLASGVLTGKYNKGSIPPDSRFALE-----N*KILLAQHWSMMC*KKVNQLKQIAMN*AWPLPKLGNCLWGFKSKWNPPLKLGA 951 Y++LG+SGLRVS L G WV+FG Q+ + A+ L+ D+G+N FD AEVYA G+AE ++G I++ GW+RS +V++TKIFWGG+ ++GLSRKHI+EG KASL+RL ++YVDV++ +RPD +TP+EETVRAM +VI++G A YWGTS WS+ +I EA+ +A + +L+ PI EQ EY+M R KVE + L+ G+G TWSPLA G+++GKY+ G IPP SR +L+ KIL + K+ +L+ IA LP+L W +++ + LGA Sbjct: 39 YRNLGKSGLRVSCLGLGTWVTFGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDSG-IPPYSRASLKGYQWLKDKILSEEGRRQQA--KLKELQAIAERLGCTLPQLA-IAWCLRNEGVSSVLLGA 324
BLAST of DY304707 vs. ExPASy Swiss-Prot
Match: KCAB2_MOUSE (Voltage-gated potassium channel subunit beta-2 OS=Mus musculus GN=Kcnab2 PE=1 SV=1) HSP 1 Score: 272.322 bits (695), Expect = 2.847e-72 Identity = 137/290 (47.24%), Postives = 197/290 (67.93%), Query Frame = 1 Query: 97 YKHLGRSGLRVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNMLSRHKVEAEYLPLYSNYGIGLTTWSPLASGVLTGKYNKGSIPPDSRFALE-----N*KILLAQHWSMMC*KKVNQLKQIAMN*AWPLPKLGNCLWGFKSKWNPPLKLGA 951 Y++LG+SGLRVS L G WV+FG Q+ + A+ L+ D+G+N FD AEVYA G+AE ++G I++ GW+RS +V++TKIFWGG+ ++GLSRKHI+EG KASL+RL ++YVDV++ +RPD +TP+EETVRAM +VI++G A YWGTS WS+ +I EA+ +A + +L+ PI EQ EY+M R KVE + L+ G+G TWSPLA G+++GKY+ G IPP SR +L+ KIL + K+ +L+ IA LP+L W +++ + LGA Sbjct: 39 YRNLGKSGLRVSCLGLGTWVTFGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDSG-IPPYSRASLKGYQWLKDKILSEEGRRQQA--KLKELQAIAERLGCTLPQLA-IAWCLRNEGVSSVLLGA 324
BLAST of DY304707 vs. ExPASy Swiss-Prot
Match: KCAB2_HUMAN (Voltage-gated potassium channel subunit beta-2 OS=Homo sapiens GN=KCNAB2 PE=1 SV=2) HSP 1 Score: 271.552 bits (693), Expect = 4.857e-72 Identity = 137/290 (47.24%), Postives = 196/290 (67.59%), Query Frame = 1 Query: 97 YKHLGRSGLRVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNMLSRHKVEAEYLPLYSNYGIGLTTWSPLASGVLTGKYNKGSIPPDSRFALE-----N*KILLAQHWSMMC*KKVNQLKQIAMN*AWPLPKLGNCLWGFKSKWNPPLKLGA 951 Y++LG+SGLRVS L G WV+FG Q+ + A+ L+ D+G+N FD AEVYA G+AE ++G I++ GW+RS +V++TKIFWGG+ ++GLSRKHI+EG KASL+RL ++YVDV++ +RPD +TP+EETVRAM +VI++G A YWGTS WS+ +I EA+ +A + +L PI EQ EY+M R KVE + L+ G+G TWSPLA G+++GKY+ G IPP SR +L+ KIL + K+ +L+ IA LP+L W +++ + LGA Sbjct: 39 YRNLGKSGLRVSCLGLGTWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLTPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDSG-IPPYSRASLKGYQWLKDKILSEEGRRQQA--KLKELQAIAERLGCTLPQLA-IAWCLRNEGVSSVLLGA 324
BLAST of DY304707 vs. ExPASy Swiss-Prot
Match: KCAB1_CHICK (Voltage-gated potassium channel subunit beta-1 OS=Gallus gallus GN=KCNAB1 PE=2 SV=1) HSP 1 Score: 266.929 bits (681), Expect = 1.196e-70 Identity = 124/263 (47.15%), Postives = 184/263 (69.96%), Query Frame = 1 Query: 1 LSQSVSRFSRTVAQQAKKQTTKRLKKQNYKMQYKHLGRSGLRVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNMLSRHKVEAEYLPLYSNYGIGLTTWSPLASGVLTGKYNKGSIPPDSRFALE 789 +++S+ F+ K+ T K+ M+Y++LG+SGLRVS L G WV+FG Q+ + A+ L+ + GVN FD AEVYA G+AE I+G +++ GW+RS +V++TK++WGG+ ++GLSRKHI+EG +ASL+RL ++YVDV++ +RPD +TP+EE VRAM +VI++G A YWGTS WSA +I EA+ +A + +L+ P+ EQ EY++ R KVE + LY G+G TWSPLA G+++GKY G +P SR AL+ Sbjct: 46 IARSLGTFTPQHHISLKESTAKQTG-----MKYRNLGKSGLRVSCLGLGTWVTFGGQISDEVAEQLMTIAYESGVNLFDTAEVYAAGKAEVILGNILKKKGWRRSSLVITTKLYWGGKAETERGLSRKHIIEGLRASLQRLQLEYVDVVFANRPDNNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNLIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIISGKYGNG-VPESSRAALK 302
BLAST of DY304707 vs. ExPASy Swiss-Prot
Match: KCAB1_RAT (Voltage-gated potassium channel subunit beta-1 OS=Rattus norvegicus GN=Kcnab1 PE=1 SV=1) HSP 1 Score: 266.544 bits (680), Expect = 1.562e-70 Identity = 129/288 (44.79%), Postives = 196/288 (68.06%), Query Frame = 1 Query: 1 LSQSVSRFSRTVAQQAKKQTTKRLKKQNYKMQYKHLGRSGLRVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNMLSRHKVEAEYLPLYSNYGIGLTTWSPLASGVLTGKYNKGSIPPDSRFALEN*KILLAQHWSMMC*KKVNQLKQIA 864 +++S+ F+ K+ T K+ M+Y++LG+SGLRVS L G WV+FG Q+ + A+ L+ + GVN FD AEVYA G+AE I+G I++ GW+RS +V++TK++WGG+ ++GLSRKHI+EG K SL+RL ++YVDV++ +RPD++TP+EE VRAM +VI++G A YWGTS WSA +I EA+ +A + +++ P+ EQ EY++ R KVE + LY G+G TWSPLA G+++GKY G +P SR +L+ + L + S K+ N+LK ++ Sbjct: 46 IARSLGTFTPQHHISLKESTAKQTG-----MKYRNLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIISGKYGNG-VPESSRASLKCYQWLKERIVSEEGRKQQNKLKDLS 327
BLAST of DY304707 vs. ExPASy Swiss-Prot
Match: KCAB1_MOUSE (Voltage-gated potassium channel subunit beta-1 OS=Mus musculus GN=Kcnab1 PE=2 SV=1) HSP 1 Score: 266.544 bits (680), Expect = 1.562e-70 Identity = 129/288 (44.79%), Postives = 196/288 (68.06%), Query Frame = 1 Query: 1 LSQSVSRFSRTVAQQAKKQTTKRLKKQNYKMQYKHLGRSGLRVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNMLSRHKVEAEYLPLYSNYGIGLTTWSPLASGVLTGKYNKGSIPPDSRFALEN*KILLAQHWSMMC*KKVNQLKQIA 864 +++S+ F+ K+ T K+ M+Y++LG+SGLRVS L G WV+FG Q+ + A+ L+ + GVN FD AEVYA G+AE I+G I++ GW+RS +V++TK++WGG+ ++GLSRKHI+EG K SL+RL ++YVDV++ +RPD++TP+EE VRAM +VI++G A YWGTS WSA +I EA+ +A + +++ P+ EQ EY++ R KVE + LY G+G TWSPLA G+++GKY G +P SR +L+ + L + S K+ N+LK ++ Sbjct: 46 IARSLGTFTPQHHISLKESTAKQTG-----MKYRNLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIISGKYGNG-VPESSRASLKCYQWLKERIVSEEGRKQQNKLKDLS 327
BLAST of DY304707 vs. ExPASy Swiss-Prot
Match: KCAB1_BOVIN (Voltage-gated potassium channel subunit beta-1 OS=Bos taurus GN=KCNAB1 PE=2 SV=1) HSP 1 Score: 266.544 bits (680), Expect = 1.562e-70 Identity = 129/288 (44.79%), Postives = 196/288 (68.06%), Query Frame = 1 Query: 1 LSQSVSRFSRTVAQQAKKQTTKRLKKQNYKMQYKHLGRSGLRVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNMLSRHKVEAEYLPLYSNYGIGLTTWSPLASGVLTGKYNKGSIPPDSRFALEN*KILLAQHWSMMC*KKVNQLKQIA 864 +++S+ F+ K+ T K+ M+Y++LG+SGLRVS L G WV+FG Q+ + A+ L+ + GVN FD AEVYA G+AE I+G I++ GW+RS +V++TK++WGG+ ++GLSRKHI+EG K SL+RL ++YVDV++ +RPD++TP+EE VRAM +VI++G A YWGTS WSA +I EA+ +A + +++ P+ EQ EY++ R KVE + LY G+G TWSPLA G+++GKY G +P SR +L+ + L + S K+ N+LK ++ Sbjct: 46 IARSLGTFTPQHHISLKESTAKQTG-----MKYRNLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIISGKYGNG-VPESSRASLKCYQWLKERIVSEEGRKQQNKLKDLS 327 The following BLAST results are available for this feature:
BLAST of DY304707 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >DY304707 ID=DY304707; Name=DY304707; organism=Citrus clementina; type=EST; length=954bpback to top |