DY304708

Overview
NameDY304708
Unique NameDY304708
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length925
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY304708 vs. ExPASy Swiss-Prot
Match: MORG1_XENTR (Mitogen-activated protein kinase organizer 1 OS=Xenopus tropicalis GN=morg1 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.977e-28
Identity = 55/114 (48.25%), Postives = 78/114 (68.42%), Query Frame = 2
Query:   17 PAQRSKEMSVSHLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVSC 358
            PA + K      LP+   + L+ ++GAV A RFN DGNYC++CG D+T++LWNPH+G  +KTY  HG EV D   + DNS++ SC  D+ +  WDV+ G+V+RKFRGH  +V+C
Sbjct:    4 PAPKPK---APELPQKLQHKLECNQGAVRAVRFNVDGNYCMTCGSDKTLKLWNPHKGTLLKTYSGHGYEVLDTAGSYDNSQMCSCSSDKTVILWDVAQGQVVRKFRGHAGKVNC 114          
BLAST of DY304708 vs. ExPASy Swiss-Prot
Match: MORG1_XENLA (Mitogen-activated protein kinase organizer 1 OS=Xenopus laevis GN=morg1 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.554e-27
Identity = 55/114 (48.25%), Postives = 78/114 (68.42%), Query Frame = 2
Query:   17 PAQRSKEMSVSHLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVSC 358
            PA + K      LP+   + L+ ++GAV A RFN DGNYC++CG D++++LWNPH+G  +KTY  HG EV D   + DNS+L SC  D+ +  WDV+ G+V+RKFRGH  +V+C
Sbjct:    4 PAPKPK---APELPQKLQHKLECNQGAVRAVRFNVDGNYCMTCGSDKSLKLWNPHKGSLLKTYSGHGYEVLDTAGSCDNSQLCSCSSDKTVILWDVAQGQVVRKFRGHAGKVNC 114          
BLAST of DY304708 vs. ExPASy Swiss-Prot
Match: MORG1_RAT (Mitogen-activated protein kinase organizer 1 OS=Rattus norvegicus GN=Morg1 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.007e-26
Identity = 55/101 (54.46%), Postives = 71/101 (70.30%), Query Frame = 2
Query:   53 LPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVS 355
            LPR +   L   +GAV A RFN DGNYCL+CG D+T++LWNP RG  ++TY  HG EV D   + DNS L S GGD+ +  WDV+TG+V+RKFRGH  +V+
Sbjct:   13 LPRKQLKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFDNSHLCSGGGDKTVVLWDVATGQVVRKFRGHAGKVN 113          
BLAST of DY304708 vs. ExPASy Swiss-Prot
Match: MORG1_MOUSE (Mitogen-activated protein kinase organizer 1 OS=Mus musculus GN=Morg1 PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.828e-26
Identity = 54/101 (53.47%), Postives = 70/101 (69.31%), Query Frame = 2
Query:   53 LPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVS 355
            LP+     L   +GAV A RFN DGNYCL+CG D+T++LWNP RG  ++TY  HG EV D   + DNS L S GGD+ +  WDV+TG+V+RKFRGH  +V+
Sbjct:   13 LPQKRMKTLDCSQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFDNSHLCSGGGDKTVVLWDVATGQVVRKFRGHAGKVN 113          
BLAST of DY304708 vs. ExPASy Swiss-Prot
Match: MORG1_HUMAN (Mitogen-activated protein kinase organizer 1 OS=Homo sapiens GN=MORG1 PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.114e-25
Identity = 53/101 (52.48%), Postives = 70/101 (69.31%), Query Frame = 2
Query:   53 LPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVS 355
            LP+     L   +GAV A RFN DGNYCL+CG D+T++LWNP RG  ++TY  HG EV D   + DNS L S GGD+ +  WDV++G+V+RKFRGH  +V+
Sbjct:   13 LPQKRLKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVN 113          
BLAST of DY304708 vs. ExPASy Swiss-Prot
Match: MORG1_DANRE (Mitogen-activated protein kinase organizer 1 OS=Danio rerio GN=morg1 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.962e-23
Identity = 51/109 (46.79%), Postives = 69/109 (63.30%), Query Frame = 2
Query:   56 PRTEANVLKGH--------EGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVSC 358
            PR +A  L  H        +GAV A RFN DGNY L+CG D++++LW+  RG  +KTY  HG EV D   + DNS+L SC  D+ +  WDV++G+V RK RGH  +V+C
Sbjct:    6 PRPQAPQLPQHLWRTVDCQQGAVRAVRFNADGNYLLTCGSDKSLKLWSVSRGTLLKTYSGHGYEVLDADGSYDNSQLCSCSSDKTVILWDVASGQVTRKLRGHAGKVNC 114          
BLAST of DY304708 vs. ExPASy Swiss-Prot
Match: MORG1_DICDI (Mitogen-activated protein kinase organizer 1 homolog OS=Dictyostelium discoideum GN=morg1 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.365e-15
Identity = 35/92 (38.04%), Postives = 61/92 (66.30%), Query Frame = 2
Query:   74 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESE 349
            VL  H G+V   ++N DG YCLS   D++I+L+N  +G  I +++ HG  + D+  T DN +L SC  ++Q++ WD+++G+VIR+F+   ++
Sbjct:    9 VLSNHSGSVTVVKYNSDGGYCLSGSSDKSIKLYNVSKGSMIHSFEEHGYGIGDLVSTSDNKQLFSC-AEKQLYQWDIASGQVIRRFQNAHND 99          
BLAST of DY304708 vs. ExPASy Swiss-Prot
Match: YN55_SCHPO (Uncharacterized WD repeat-containing protein C713.05 OS=Schizosaccharomyces pombe GN=SPBC713.05 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.155e-14
Identity = 34/82 (41.46%), Postives = 52/82 (63.41%), Query Frame = 2
Query:  110 RFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVS 355
            ++N  G Y L+ G +R +RLWN   G  I  Y  HG E+ D+ +  D++K  SCGGD+ I  WDV+TG+V R+  GH ++++
Sbjct:   21 KYNRTGKYVLAAGNERVVRLWNVKSGACIHEYAGHGHEILDLDLVYDSTKFASCGGDKFIQVWDVNTGKVDRRLGGHLAQIN 102          
BLAST of DY304708 vs. ExPASy Swiss-Prot
Match: NUDF_CRYNE (Nuclear distribution protein PAC1 OS=Cryptococcus neoformans GN=PAC1 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.854e-13
Identity = 37/99 (37.37%), Postives = 50/99 (50.51%), Query Frame = 2
Query:   62 TEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVSC 358
            T    L GH+ +V + RF  DG   +S  +D+TIR+W    G  IKT+  H   VR+   + D   L+S   D+    WD STG    + RGHE  V C
Sbjct:  181 TNVKTLHGHDHSVSSVRFMPDGETLVSASRDKTIRVWQVSSGYCIKTFSGHAEWVREAVPSEDGRWLVSASNDQTSRIWDFSTGETKMELRGHEHVVEC 279          
BLAST of DY304708 vs. ExPASy Swiss-Prot
Match: Y2800_ANASP (Uncharacterized WD repeat-containing protein alr2800 OS=Anabaena sp. (strain PCC 7120) GN=alr2800 PE=4 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.340e-13
Identity = 38/92 (41.30%), Postives = 49/92 (53.26%), Query Frame = 2
Query:   77 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEV 352
            LK H G V +  F+ DG    S   DRTI++WN H G  +KTY  H   V  +  +PD+  L+S  GDR I  WD  T   I+   GH +EV
Sbjct:  806 LKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGECLKTYIGHTNSVYSIAYSPDSKILVSGSGDRTIKLWDCQTHICIKTLHGHTNEV 897          

HSP 2 Score: 71.633 bits (174), Expect = 7.009e-12
Identity = 34/95 (35.79%), Postives = 45/95 (47.37%), Query Frame = 2
Query:   74 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVSC 358
            + +GH   V    F+ DG    SCG D  ++LW+   G+ IKT   H  EV  V   PD   L S  GD+ I  WD+  G  ++   GH   V C
Sbjct:  679 ICRGHSNWVRFVVFSPDGEILASCGADENVKLWSVRDGVCIKTLTGHEHEVFSVAFHPDGETLASASGDKTIKLWDIQDGTCLQTLTGHTDWVRC 773          
The following BLAST results are available for this feature:
BLAST of DY304708 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
MORG1_XENTR6.977e-2848.25Mitogen-activated protein kinase organizer 1 OS=Xe... [more]
MORG1_XENLA1.554e-2748.25Mitogen-activated protein kinase organizer 1 OS=Xe... [more]
MORG1_RAT1.007e-2654.46Mitogen-activated protein kinase organizer 1 OS=Ra... [more]
MORG1_MOUSE3.828e-2653.47Mitogen-activated protein kinase organizer 1 OS=Mu... [more]
MORG1_HUMAN1.114e-2552.48Mitogen-activated protein kinase organizer 1 OS=Ho... [more]
MORG1_DANRE3.962e-2346.79Mitogen-activated protein kinase organizer 1 OS=Da... [more]
MORG1_DICDI1.365e-1538.04Mitogen-activated protein kinase organizer 1 homol... [more]
YN55_SCHPO1.155e-1441.46Uncharacterized WD repeat-containing protein C713.... [more]
NUDF_CRYNE4.854e-1337.37Nuclear distribution protein PAC1 OS=Cryptococcus ... [more]
Y2800_ANASP6.340e-1341.30Uncharacterized WD repeat-containing protein alr28... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAQ9YH18RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304708 ID=DY304708; Name=DY304708; organism=Citrus clementina; type=EST; length=925bp
CGCACGCTATCTCGTTCCCGCTCAAAGAAGCAAAGAGATGAGCGTATCCC
ATCTGCCGAGGACAGAGGCTAACGTGCTCAAGGGCCACGAAGGCGCAGTT
TTAGCCGCTCGGTTCAACGGCGACGGTAATTATTGTCTGAGTTGCGGCAA
GGACCGCACCATCCGCTTGTGGAATCCTCACCGCGGGATTCACATCAAGA
CCTACAAATCCCACGGCCGCGAAGTCCGCGACGTCCACGTTACCCCAGAC
AACTCGAAGTTGATATCTTGTGGCGGTGATCGGCAAATCTTTTATTGGGA
TGTTTCGACTGGTCGTGTTATTCGGAAGTTTCGTGGCCACGAAAGCGAGG
TTAGCTGTCGTTTTGAACTTCTTTTCTGTTTTTAGGGACTATGGTGAATT
TGGAAGTGCTTTCCGGTAAAAAGCGCTTTCAAATCGTAAAAAGTGCTTTT
TTTTTAAAGAATGTATAGTTTACGTGAAAGAAACAAGAACTTGAAACTGC
ATCTTCGAGATTCAGTTAATAAGTGCTTTTTCGTATTGTATGCTTGTGGT
TGAGGTATTGGATTTTAATACATTGCTGTTGTGGAATGAAATCTCTAGCA
GTGGAGTATAATTTGCACAGATGGTTTTTTAATATTAACTGCTGATTAAG
TTTAGCTGTTCCTGCTTTCAAAATTACAAAAAAGTATAATTATTACAGAA
ATACCCAAAGTGATTTTGTAAAAAGTTCTTTGAGCTAAAACCGGTTGTAC
CATTAAACACGCGCCGAAACCGCCTGGGGCTTTTGGGATACTTTTTTTTT
GGGAGATCTTTTCTTTTCATTTCCCCACCTTAAAATAAATATCTTTTTCA
TCTAATTCAACCAAACCCAATTTCCATCAGAAAGATCCCCCCTCTTTCTT
TAATTATTTCTGTCTGCAACAGTCT
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