DY304709

Overview
NameDY304709
Unique NameDY304709
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length982
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY304709 vs. ExPASy Swiss-Prot
Match: WRK19_ARATH (Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.813e-53
Identity = 101/190 (53.16%), Postives = 118/190 (62.11%), Query Frame = 2
Query:    2 ARGASGLCIGHGGGP*CQKPGCNKGAESRTAFCKAHGGGRRCQQLGCTKSAEGKTDLCIAHGGGRRCQFPEGCAKAARGKSGLCIKHGGGKRCKMEGCTRSAEGQVGLCISHXXXXXXXXXXXNKGAQGSTMFCKAHGGGKRCIFAGCTRGAEGSTPLCKGHGGGKRCLFDGGGIGPKSERGGTKFMCCA 571
            AR ASG CI HGGG  CQKP C KGAE +T +CKAHGGGRRC+ LGCTK AEG TD CIAHGGGRRC   E C ++A G++  C+KHGGG RCK  GC +SA G +  C +H              A+G +  C  HGGGKRC    CT+ AEG + LC  HGGG+RC   G   G K    G+K  C A
Sbjct:  102 ARDASGRCISHGGGRRCQKPDCQKGAEGKTVYCKAHGGGRRCEYLGCTKGAEGSTDFCIAHGGGRRCNH-EDCTRSAWGRTEFCVKHGGGARCKTYGCGKSASGPLPFCRAHGGGKKCSHEDCTGFARGRSGLCLMHGGGKRCQRENCTKSAEGLSGLCISHGGGRRCQSIGCTKGAK----GSKMFCKA 286          

HSP 2 Score: 171.785 bits (434), Expect = 3.079e-42
Identity = 79/152 (51.97%), Postives = 91/152 (59.87%), Query Frame = 2
Query:   50 CQKPGCNKGAESRTAFCKAHGGGRRCQQLGCTKSAEGKTDLCIAHGGGRRCQFPEGCAKAARGKSGLCIKHGGGKRCKMEGCTRSAEGQVGLCISHXXXXXXXXXXXNKGAQGSTMFCKAHGGGKRCIFAGCTRGAEGSTPLCKGHGGGKRC 505
            CQ  GC KGA   +  C +HGGGRRCQ+  C K AEGKT  C AHGGGRRC++  GC K A G +  CI HGGG+RC  E CTRSA G+   C+ H            K A G   FC+AHGGGK+C    CT  A G + LC  HGGGKRC
Sbjct:   93 CQVEGCQKGARDASGRCISHGGGRRCQKPDCQKGAEGKTVYCKAHGGGRRCEY-LGCTKGAEGSTDFCIAHGGGRRCNHEDCTRSAWGRTEFCVKHGGGARCKTYGCGKSASGPLPFCRAHGGGKKCSHEDCTGFARGRSGLCLMHGGGKRC 243          

HSP 3 Score: 21.9422 bits (45), Expect = 3.079e-42
Identity = 6/9 (66.67%), Postives = 9/9 (100.00%), Query Frame = 3
Query:  558 LCVAHGGGK 584
            LC++HGGG+
Sbjct:  258 LCISHGGGR 266          

HSP 4 Score: 110.923 bits (276), Expect = 5.295e-24
Identity = 58/120 (48.33%), Postives = 65/120 (54.17%), Query Frame = 2
Query:  200 CQFPEGCAKAARGKSGLCIKHGGGKRCKMEGCTRSAEGQVGLCISHXXXXXXXXXXXNKGAQGSTMFCKAHGGGKRCIFAGCTRGAEGSTPLCKGHGGGKRCLFDGGGIGPKSERGGTKF 559
            CQ  EGC K AR  SG CI HGGG+RC+   C + AEG+   C +H            KGA+GST FC AHGGG+RC    CTR A G T  C  HGGG RC   G G   KS  G   F
Sbjct:   93 CQV-EGCQKGARDASGRCISHGGGRRCQKPDCQKGAEGKTVYCKAHGGGRRCEYLGCTKGAEGSTDFCIAHGGGRRCNHEDCTRSAWGRTEFCVKHGGGARCKTYGCG---KSASGPLPF 208          

HSP 5 Score: 21.557 bits (44), Expect = 5.295e-24
Identity = 7/9 (77.78%), Postives = 8/9 (88.89%), Query Frame = 3
Query:  558 LCVAHGGGK 584
            LC+ HGGGK
Sbjct:  233 LCLMHGGGK 241          

HSP 6 Score: 100.138 bits (248), Expect = 1.842e-20
Identity = 47/107 (43.93%), Postives = 58/107 (54.21%), Query Frame = 2
Query:  200 CQFPEGCAKAARGKSGLCIKH-----GGGKRCKMEGCTRSAEGQVGLCISHXXXXXXXXXXXNKGAQGSTMFCKAHGGGKRCIFAGCTRGAEGSTPLCKGHGGGKRC 505
            C  P G A      SG  +          K C++EGC + A    G CISH            KGA+G T++CKAHGGG+RC + GCT+GAEGST  C  HGGG+RC
Sbjct:   62 CTVPPGMAATPPISSGSGLSQQLNNSSSSKLCQVEGCQKGARDASGRCISHGGGRRCQKPDCQKGAEGKTVYCKAHGGGRRCEYLGCTKGAEGSTDFCIAHGGGRRC 168          

HSP 7 Score: 20.4014 bits (41), Expect = 1.842e-20
Identity = 7/8 (87.50%), Postives = 7/8 (87.50%), Query Frame = 3
Query:  561 CVAHGGGK 584
            C AHGGGK
Sbjct:  209 CRAHGGGK 216          
The following BLAST results are available for this feature:
BLAST of DY304709 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
WRK19_ARATH1.813e-5353.16Probable WRKY transcription factor 19 OS=Arabidops... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAQ9YH19RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304709 ID=DY304709; Name=DY304709; organism=Citrus clementina; type=EST; length=982bp
AGCTCGAGGGGCATCTGGTCTATGTATCGGTCATGGAGGCGGACCTTGAT
GTCAAAAACCAGGATGTAACAAGGGTGCTGAAAGCCGAACTGCCTTTTGC
AAGGCCCATGGTGGTGGGAGGAGGTGCCAGCAATTAGGTTGCACTAAAAG
TGCCGAAGGCAAGACAGATTTATGCATAGCTCATGGTGGTGGAAGACGAT
GCCAATTTCCAGAAGGTTGCGCCAAGGCTGCTCGAGGCAAGTCAGGGCTT
TGCATTAAACACGGTGGGGGAAAAAGGTGTAAGATGGAAGGCTGCACCCG
AAGTGCTGAAGGACAAGTTGGCTTGTGCATTTCTCATGGGGGTGGCCGCC
GTTGCCGGTACGGAGGATGTAATAAGGGCGCCCAAGGTAGCACCATGTTC
TGCAAGGCACATGGTGGTGGAAAGCGATGCATATTTGCAGGGTGCACCAG
AGGTGCTGAAGGGAGTACGCCATTGTGTAAAGGGCACGGTGGAGGGAAGC
GCTGTCTCTTTGACGGTGGTGGGATAGGCCCAAAGAGTGAACGTGGAGGC
ACAAAATTTATGTGTTGCGCATGGTGGTGGTAAAATAGGATATGGTCCGC
GCTACAGATAAACTAACCGCGTTCAAAATGGTGAGTTGCGACAAACACAG
AAGGATGAACACCCCCGCAAATAACAAAACTAGCTGCTAAGTGTCACCGA
GACAAACACCCATTTTATAGCGGATTCCAAATTGCGAATAAAAAAAAGAT
GGATTCCGGGACCTATTAAACATTCCTAAAACTTACAACACAAGACTTAT
GAAAGAATACACTATCGCAACCACCGGGTATAATGAAAAGAAGAAAAACT
CCAAATCGCAAATGACGCGCCCTGCCCCTATATATTTCTATATCCCCTCA
TATCCACAGTTTGATCACTGCACCTTTCACGTTACCGAAACCACTAAAAA
TAATATTGATCTAACCAACCCATTTCCTACAA
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