DY304709
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY304709 vs. ExPASy Swiss-Prot
Match: WRK19_ARATH (Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 1.813e-53 Identity = 101/190 (53.16%), Postives = 118/190 (62.11%), Query Frame = 2 Query: 2 ARGASGLCIGHGGGP*CQKPGCNKGAESRTAFCKAHGGGRRCQQLGCTKSAEGKTDLCIAHGGGRRCQFPEGCAKAARGKSGLCIKHGGGKRCKMEGCTRSAEGQVGLCISHXXXXXXXXXXXNKGAQGSTMFCKAHGGGKRCIFAGCTRGAEGSTPLCKGHGGGKRCLFDGGGIGPKSERGGTKFMCCA 571 AR ASG CI HGGG CQKP C KGAE +T +CKAHGGGRRC+ LGCTK AEG TD CIAHGGGRRC E C ++A G++ C+KHGGG RCK GC +SA G + C +H A+G + C HGGGKRC CT+ AEG + LC HGGG+RC G G K G+K C A Sbjct: 102 ARDASGRCISHGGGRRCQKPDCQKGAEGKTVYCKAHGGGRRCEYLGCTKGAEGSTDFCIAHGGGRRCNH-EDCTRSAWGRTEFCVKHGGGARCKTYGCGKSASGPLPFCRAHGGGKKCSHEDCTGFARGRSGLCLMHGGGKRCQRENCTKSAEGLSGLCISHGGGRRCQSIGCTKGAK----GSKMFCKA 286 HSP 2 Score: 171.785 bits (434), Expect = 3.079e-42 Identity = 79/152 (51.97%), Postives = 91/152 (59.87%), Query Frame = 2 Query: 50 CQKPGCNKGAESRTAFCKAHGGGRRCQQLGCTKSAEGKTDLCIAHGGGRRCQFPEGCAKAARGKSGLCIKHGGGKRCKMEGCTRSAEGQVGLCISHXXXXXXXXXXXNKGAQGSTMFCKAHGGGKRCIFAGCTRGAEGSTPLCKGHGGGKRC 505 CQ GC KGA + C +HGGGRRCQ+ C K AEGKT C AHGGGRRC++ GC K A G + CI HGGG+RC E CTRSA G+ C+ H K A G FC+AHGGGK+C CT A G + LC HGGGKRC Sbjct: 93 CQVEGCQKGARDASGRCISHGGGRRCQKPDCQKGAEGKTVYCKAHGGGRRCEY-LGCTKGAEGSTDFCIAHGGGRRCNHEDCTRSAWGRTEFCVKHGGGARCKTYGCGKSASGPLPFCRAHGGGKKCSHEDCTGFARGRSGLCLMHGGGKRC 243 HSP 3 Score: 21.9422 bits (45), Expect = 3.079e-42 Identity = 6/9 (66.67%), Postives = 9/9 (100.00%), Query Frame = 3 Query: 558 LCVAHGGGK 584 LC++HGGG+ Sbjct: 258 LCISHGGGR 266 HSP 4 Score: 110.923 bits (276), Expect = 5.295e-24 Identity = 58/120 (48.33%), Postives = 65/120 (54.17%), Query Frame = 2 Query: 200 CQFPEGCAKAARGKSGLCIKHGGGKRCKMEGCTRSAEGQVGLCISHXXXXXXXXXXXNKGAQGSTMFCKAHGGGKRCIFAGCTRGAEGSTPLCKGHGGGKRCLFDGGGIGPKSERGGTKF 559 CQ EGC K AR SG CI HGGG+RC+ C + AEG+ C +H KGA+GST FC AHGGG+RC CTR A G T C HGGG RC G G KS G F Sbjct: 93 CQV-EGCQKGARDASGRCISHGGGRRCQKPDCQKGAEGKTVYCKAHGGGRRCEYLGCTKGAEGSTDFCIAHGGGRRCNHEDCTRSAWGRTEFCVKHGGGARCKTYGCG---KSASGPLPF 208 HSP 5 Score: 21.557 bits (44), Expect = 5.295e-24 Identity = 7/9 (77.78%), Postives = 8/9 (88.89%), Query Frame = 3 Query: 558 LCVAHGGGK 584 LC+ HGGGK Sbjct: 233 LCLMHGGGK 241 HSP 6 Score: 100.138 bits (248), Expect = 1.842e-20 Identity = 47/107 (43.93%), Postives = 58/107 (54.21%), Query Frame = 2 Query: 200 CQFPEGCAKAARGKSGLCIKH-----GGGKRCKMEGCTRSAEGQVGLCISHXXXXXXXXXXXNKGAQGSTMFCKAHGGGKRCIFAGCTRGAEGSTPLCKGHGGGKRC 505 C P G A SG + K C++EGC + A G CISH KGA+G T++CKAHGGG+RC + GCT+GAEGST C HGGG+RC Sbjct: 62 CTVPPGMAATPPISSGSGLSQQLNNSSSSKLCQVEGCQKGARDASGRCISHGGGRRCQKPDCQKGAEGKTVYCKAHGGGRRCEYLGCTKGAEGSTDFCIAHGGGRRC 168 HSP 7 Score: 20.4014 bits (41), Expect = 1.842e-20 Identity = 7/8 (87.50%), Postives = 7/8 (87.50%), Query Frame = 3 Query: 561 CVAHGGGK 584 C AHGGGK Sbjct: 209 CRAHGGGK 216 The following BLAST results are available for this feature:
BLAST of DY304709 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 1
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY304709 ID=DY304709; Name=DY304709; organism=Citrus clementina; type=EST; length=982bpback to top |