DY304711

Overview
NameDY304711
Unique NameDY304711
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length891
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY304711 vs. ExPASy Swiss-Prot
Match: TLP1_PYRPY (Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1 PE=1 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 2.095e-74
Identity = 128/224 (57.14%), Postives = 160/224 (71.43%), Query Frame = 3
Query:  144 FTITNECSNTIWPGILSGAGTPQLSPTGFSLEAGQSTSISVPASWSGRLWARTHCTQDS--KFTCLTGDCGSGTLECSGSGAAPPATLAEFTLNGAGGLDFFDVSLVDGYNLPMLVTPQTQSGTAGNCTAAGCIAELNNACPSELKVTEAGNGEDVACKSACEAFGDPQYCCSGAFATPDTCKPTSYSMFFKNACPKAYSYAYDDGTSTFTC-APADYVITFCP 806
            FT TN+C NT+WPG L+G G PQL  TGF L +G STS++V A WSGR W R+HC+ DS  KF C TGDCGSG + C+G+GA+PPA+L E TL   GG DF+DVSLVDG+NLP+ + P+   G +G+C +  C A +N  CP+EL   +  +G  + CKSAC A   PQYCC+GA+ TPDTC PT +S  FKN CP+AYSYAYDD +STFTC    +Y ITFCP
Sbjct:   25 FTFTNKCPNTVWPGTLTGGGGPQLLSTGFELASGASTSLTVQAPWSGRFWGRSHCSIDSSGKFKCSTGDCGSGQISCNGAGASPPASLVELTLATNGGQDFYDVSLVDGFNLPIKLAPR---GGSGDCNSTSCAANINTVCPAELS-DKGSDGSVIGCKSACLALNQPQYCCTGAYGTPDTCPPTDFSKVFKNQCPQAYSYAYDDKSSTFTCFGGPNYEITFCP 244          
BLAST of DY304711 vs. ExPASy Swiss-Prot
Match: TP1A_MALDO (Thaumatin-like protein 1a OS=Malus domestica GN=TL1 PE=1 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 4.088e-70
Identity = 125/223 (56.05%), Postives = 153/223 (68.61%), Query Frame = 3
Query:  147 TITNECSNTIWPGILSGAGTPQLSPTGFSLEAGQSTSISVPASWSGRLWARTHCTQDS--KFTCLTGDCGSGTLECSGSGAAPPATLAEFTLNGAGGLDFFDVSLVDGYNLPMLVTPQTQSGTAGNCTAAGCIAELNNACPSELKVTEAGNGEDVACKSACEAFGDPQYCCSGAFATPDTCKPTSYSMFFKNACPKAYSYAYDDGTSTFTCAPA-DYVITFCP 806
            T TN C NT+WPG L+G   PQLS TGF L +  S S+  P+ WSGR W RT C+ D+  KFTC T DCGSG + C+G+GA PPATL E T+   GG D++DVSLVDG+NLPM V PQ   G  G C  + C A +N  CP+ L+V +A +G  ++CKSAC AFGD +YCC+    TP+TC PT YS  F+  CP+AYSYAYDD  STFTC+   DYVITFCP
Sbjct:   28 TFTNNCPNTVWPGTLTGDQKPQLSLTGFELASKASRSVDAPSPWSGRFWGRTRCSTDAAGKFTCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDYYDVSLVDGFNLPMSVAPQ---GGTGECKPSSCPANVNKVCPAPLQV-KAADGSVISCKSACLAFGDSKYCCTPPNNTPETCPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFCP 246          
BLAST of DY304711 vs. ExPASy Swiss-Prot
Match: TLP1_PRUPE (Thaumatin-like protein 1 OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 7.710e-69
Identity = 126/224 (56.25%), Postives = 155/224 (69.20%), Query Frame = 3
Query:  147 TITNECSNTIWPGILSGAGTPQLSPTGFSLEAGQSTSISVPASWSGRLWARTHCTQDS--KFTCLTGDCGSGTLECSGSGAAPPATLAEFTLNGAGGLDFFDVSLVDGYNLPMLVTPQTQSGTAGNCTAAGCIAELNNACPSELKVTEAGNGEDVACKSACEAFGDPQYCCSGAFATPDTCKPTSYSMFFKNACPKAYSYAYDDGTSTFTCA--PADYVITFCP 806
            T TN+CS T+WPG L+G   PQLS TGF L  G S S+  P+ WSGR + RT C+ D+  KFTC T DCGSG + C+G+GAAPPATL E T+   GG DF+DVSLVDG+NLPM V PQ   G  G C A+ C A++N  CP+ L+V +  +G  +ACKSAC AF  P+YCC+     P+TC P  YS  FK  CP+AYSYAYDD +STFTC+  PA Y+ITFCP
Sbjct:   28 TFTNKCSYTVWPGTLTGDQKPQLSLTGFELATGISRSVDAPSPWSGRFFGRTRCSTDASGKFTCATADCGSGQVSCNGNGAAPPATLVEITIASNGGQDFYDVSLVDGFNLPMSVAPQ---GGTGKCKASTCPADINKVCPAPLQV-KGSDGSVIACKSACLAFNQPKYCCTPPNDKPETCPPPDYSKLFKTQCPQAYSYAYDDKSSTFTCSGRPA-YLITFCP 246          
BLAST of DY304711 vs. ExPASy Swiss-Prot
Match: PR5_ARATH (Pathogenesis-related protein 5 OS=Arabidopsis thaliana GN=At1g75040 PE=1 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 2.480e-67
Identity = 128/223 (57.40%), Postives = 149/223 (66.82%), Query Frame = 3
Query:  144 FTITNECSNTIWPGILSGAGTPQLSPTGFSLEAGQSTSISVPASWSGRLWARTHCTQDSKFT--CLTGDCGSGTLECSGSGAAPPATLAEFTLNGAGGLDFFDVSLVDGYNLPMLVTPQTQSGTAGNCTAAGCIAELNNACPSELKVTEAGNGEDVACKSACEAFGDPQYCCSGAFATPDTCKPTSYSMFFKNACPKAYSYAYDDGTSTFTCAPADYVITFCP 806
            FT+ N C  T+W G L+G G P+L   GF L  G S  ++ PA WSGR WART C  D+     C+TGDCG   L C+G G  PP TLAEFTL G GG DF+DVSLVDGYN+ + + P   SG +G+C  AGC+++LN ACP  LKV +  N   VACKSACE F   QYCC GA   P+TC PT YS  FKNACP AYSYAYDD TSTFTC  A+Y ITFCP
Sbjct:   26 FTLRNNCPTTVWAGTLAGQG-PKLGDGGFELTPGASRQLTAPAGWSGRFWARTGCNFDASGNGRCVTGDCGG--LRCNGGGV-PPVTLAEFTLVGDGGKDFYDVSLVDGYNVKLGIRP---SGGSGDCKYAGCVSDLNAACPDMLKVMDQNNV--VACKSACERFNTDQYCCRGANDKPETCPPTDYSRIFKNACPDAYSYAYDDETSTFTCTGANYEITFCP 239          
BLAST of DY304711 vs. ExPASy Swiss-Prot
Match: TP1B_MALDO (Thaumatin-like protein 1b (Fragment) OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 9.425e-67
Identity = 120/216 (55.56%), Postives = 150/216 (69.44%), Query Frame = 3
Query:  168 NTIWPGILSGAGTPQLSPTGFSLEAGQSTSISVPASWSGRLWARTHCTQDS--KFTCLTGDCGSGTLECSGSGAAPPATLAEFTLNGAGGLDFFDVSLVDGYNLPMLVTPQTQSGTAGNCTAAGCIAELNNACPSELKVTEAGNGEDVACKSACEAFGDPQYCCSGAFATPDTCKPTSYSMFFKNACPKAYSYAYDDGTSTFTCAPA-DYVITFCP 806
            NT+WPG L+G   PQLS T F L +  S S+  P+ WSGR W RT C+ D+  KF+C T DCGSG + C+G+GA PPATL E T+   GG D++DVSLVDG+NLPM V PQ   G  G C  + C A +N ACP++L+V +A +G  ++CKSAC AFGD +YCC+    TP+TC PT YS  F+  CP+AYSYAYDD  STFTC+   DYVITFCP
Sbjct:    1 NTVWPGTLTGDQKPQLSLTAFELASKASQSVDAPSPWSGRFWGRTRCSTDAAGKFSCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDYYDVSLVDGFNLPMSVAPQ---GGTGECKPSSCPANVNMACPAQLQV-KAADGSVISCKSACLAFGDSKYCCTPPNDTPETCPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFCP 212          
BLAST of DY304711 vs. ExPASy Swiss-Prot
Match: TLP1_CASSA (Thaumatin-like protein 1 OS=Castanea sativa GN=TL1 PE=2 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 9.425e-67
Identity = 125/222 (56.31%), Postives = 150/222 (67.57%), Query Frame = 3
Query:  147 TITNECSNTIWPGILSGAGTPQLSPTGFSLEAGQSTSISVPASWSGRLWARTHCTQDS-KFTCLTGDCGSGTLECSGSGAAPPATLAEFTLNGAGGLDFFDVSLVDGYNLPMLVTPQTQSGTAGNCTAAGCIAELNNACPSELKVTEAGNGEDVACKSACEAFGDPQYCCSGAFATPDTCKPTSYSMFFKNACPKAYSYAYDDGTSTFTCAPA-DYVITFCP 806
            T TN C  TIWPG L+    PQL  TGF L +  S ++ V A W GR WART CT +S KFTC T DC +G + C+G+GA PPA+L E  +    G+DF+DVSLVDGYNLP+ V   T+ GT G+C A  C A +N  CP+EL+V +  +   +ACKSAC AF  PQYCC+GAF T  TC  T YS  FK  CP+AYSYAYDD TSTFTC+ A DYVITFCP
Sbjct:   26 TFTNNCPRTIWPGTLTSDQKPQLPNTGFVLASKASLTLGVQAPWKGRFWARTRCTTNSGKFTCETADCSTGQVACNGNGAIPPASLVEINIAANRGMDFYDVSLVDGYNLPVSVA--TRGGT-GDCKATSCRANVNAVCPAELQV-KGSDASVLACKSACTAFNQPQYCCTGAFDTARTCPATKYSRIFKQQCPQAYSYAYDDSTSTFTCSGAPDYVITFCP 243          
BLAST of DY304711 vs. ExPASy Swiss-Prot
Match: TLP_PRUAV (Glucan endo-1,3-beta-glucosidase OS=Prunus avium PE=1 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 1.361e-65
Identity = 121/220 (55.00%), Postives = 143/220 (65.00%), Query Frame = 3
Query:  156 NECSNTIWPGILSGAGTPQLSPTGFSLEAGQSTSISVPASWSGRLWARTHCTQDS--KFTCLTGDCGSGTLECSGSGAAPPATLAEFTLNGAGGLDFFDVSLVDGYNLPMLVTPQTQSGTAGNCTAAGCIAELNNACPSELKVTEAGNGEDVACKSACEAFGDPQYCCSGAFATPDTCKPTSYSMFFKNACPKAYSYAYDDGTSTFTC-APADYVITFCP 806
            N C   +WPG L+    PQLS TGF L +  S  +  P  W+GR WART C+ D+  KF C T DC SG + C+G+GA PPATLAEF +   GG DF+DVSLVDG+NLPM VTPQ   G  G+C  A C A +N  CPSEL+  +  +G  VAC SAC  FG PQYCC+    TP+TC PT+YS  F NACP AYSYAYDD   TFTC    +Y ITFCP
Sbjct:   30 NNCPYMVWPGTLTSDQKPQLSTTGFELASQASFQLDTPVPWNGRFWARTGCSTDASGKFVCATADCASGQVMCNGNGAIPPATLAEFNIPAGGGQDFYDVSLVDGFNLPMSVTPQ---GGTGDCKTASCPANVNAVCPSELQ-KKGSDGSVVACLSACVKFGTPQYCCTPPQNTPETCPPTNYSEIFHNACPDAYSYAYDDKRGTFTCNGGPNYAITFCP 245          
BLAST of DY304711 vs. ExPASy Swiss-Prot
Match: TLPH_ARATH (Thaumatin-like protein OS=Arabidopsis thaliana GN=At1g18250 PE=2 SV=2)

HSP 1 Score: 243.817 bits (621), Expect = 9.753e-64
Identity = 118/219 (53.88%), Postives = 144/219 (65.75%), Query Frame = 3
Query:  156 NECSNTIWPGILSGAGTPQLSPTGFSLEAGQSTSISVPASWSGRLWARTHCTQD--SKFTCLTGDCGSGTLECSGSGAAPPATLAEFTLNGAGGLDFFDVSLVDGYNLPMLVTPQTQSGTAGNCTAAGCIAELNNACPSELKVTEAGNGEDVACKSACEAFGDPQYCCSGAFATPDTCKPTSYSMFFKNACPKAYSYAYDDGTSTFTCAPADYVITFCP 806
            N+C + +WPGI   AG   L+  GF L A ++ S+ +P  WSGR W R  CT D   +  C TGDCG G+L C+G+G  PPATLAE TL     LDF+DVSLVDGYNL M + P   SG    C+ AGC+++LN  CP  L+V        VACKSAC AF  PQYCC+G F  P +CKPT+YS  FK ACPKAYSYAYDD TS  TC+ A+Y++TFCP
Sbjct:   27 NKCKHPVWPGIQPSAGQNLLAGGGFKLPANKAHSLQLPPLWSGRFWGRHGCTFDRSGRGHCATGDCG-GSLSCNGAGGEPPATLAEITLGPE--LDFYDVSLVDGYNLAMSIMPVKGSG---QCSYAGCVSDLNQMCPVGLQVRSRNGKRVVACKSACSAFNSPQYCCTGLFGNPQSCKPTAYSKIFKVACPKAYSYAYDDPTSIATCSKANYIVTFCP 239          
BLAST of DY304711 vs. ExPASy Swiss-Prot
Match: TLP2_PRUPE (Thaumatin-like protein 2 OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 1.318e-60
Identity = 115/220 (52.27%), Postives = 136/220 (61.82%), Query Frame = 3
Query:  156 NECSNTIWPGILSGAGTPQLSPTGFSLEAGQSTSISVPASWSGRLWARTHCTQDS--KFTCLTGDCGSGTLECSGSGAAPPATLAEFTLNGAGGLDFFDVSLVDGYNLPMLVTPQTQSGTAGNCTAAGCIAELNNACPSELKVTEAGNGEDVACKSACEAFGDPQYCCSGAFATPDTCKPTSYSMFFKNACPKAYSYAYDDGTSTFTCAPA-DYVITFCP 806
            N C  T+WP   +  G PQLS TGF L +  S  +  P  WSGR WART C+ D+  KF C T DC SG L C+G    PPATLAEFT+   GG DF+DVSLVDG+NLPM VTPQ   G  G C    C A +N  CPSEL+     +G  VAC SAC  FG+PQYCC+    T + C PT+YS  F   CP AYSYA+DD    FTC+   +Y+ITFCP
Sbjct:   30 NNCPYTVWP---ASFGNPQLSTTGFELASQASFQLDTPVPWSGRFWARTRCSTDASGKFVCETADCDSGQLMCNGKTGIPPATLAEFTIAAGGGQDFYDVSLVDGFNLPMSVTPQ---GGTGTCKMGSCAANVNLVCPSELQKI-GSDGSVVACLSACVKFGEPQYCCTPPQETKEKCPPTNYSQIFHEQCPDAYSYAFDDNKGLFTCSGGPNYLITFCP 242          
BLAST of DY304711 vs. ExPASy Swiss-Prot
Match: TLPH_ORYSJ (Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os11g0706600 PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 5.364e-54
Identity = 105/222 (47.30%), Postives = 136/222 (61.26%), Query Frame = 3
Query:  150 ITNECSNTIWPGILSGAGTPQLSPTGFSLEAGQSTSISVPASWSGRLWARTHCTQDSKF--TCLTGDCGSGTLECSGSGAAPPATLAEFTLN-GAGGLDFFDVSLVDGYNLPMLVTPQTQSGTAGNCTAAGCIAELNNACPSELKVTEAGNGEDVACKSACEAFGDPQYCCSGAFATPDTCKPTSYSMFFKNACPKAYSYAYDDGTSTFTCAPADYVITFCP 806
            + N C  ++WPG+L  AG P     GF L AG+  ++ VPA WSGR+W R  C+ DS+   +C TGDCG G L C+G+  A PAT+ E TL   A  + F+DVSLVDG+N P  V+     G  G C  A C A++N  CPS L+V +   G    C+SAC A G  +YCC+G +A+P  C+PT +S  FK  CP+AYSYAYDD TS   C    Y+ITFCP
Sbjct:   33 MVNNCGESVWPGLLGTAGHPTPQSGGFHLGAGEEAALEVPAGWSGRVWPRRGCSFDSRGRGSCATGDCG-GVLRCNGAAGATPATVVEMTLGTSASAMHFYDVSLVDGFNAP--VSMAAVGGGVG-CGTAACGADVNVCCPSALEVRDR-EGRVAGCRSACRAMGGDRYCCTGDYASPSACRPTIFSHLFKAICPRAYSYAYDDATSLNRCHAKRYLITFCP 249          
The following BLAST results are available for this feature:
BLAST of DY304711 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
TLP1_PYRPY2.095e-7457.14Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1... [more]
TP1A_MALDO4.088e-7056.05Thaumatin-like protein 1a OS=Malus domestica GN=TL... [more]
TLP1_PRUPE7.710e-6956.25Thaumatin-like protein 1 OS=Prunus persica PE=2 SV... [more]
PR5_ARATH2.480e-6757.40Pathogenesis-related protein 5 OS=Arabidopsis thal... [more]
TP1B_MALDO9.425e-6755.56Thaumatin-like protein 1b (Fragment) OS=Malus dome... [more]
TLP1_CASSA9.425e-6756.31Thaumatin-like protein 1 OS=Castanea sativa GN=TL1... [more]
TLP_PRUAV1.361e-6555.00Glucan endo-1,3-beta-glucosidase OS=Prunus avium P... [more]
TLPH_ARATH9.753e-6453.88Thaumatin-like protein OS=Arabidopsis thaliana GN=... [more]
TLP2_PRUPE1.318e-6052.27Thaumatin-like protein 2 OS=Prunus persica PE=2 SV... [more]
TLPH_ORYSJ5.364e-5447.30Thaumatin-like protein OS=Oryza sativa subsp. japo... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAQ9YH21RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304711 ID=DY304711; Name=DY304711; organism=Citrus clementina; type=EST; length=891bp
CAAGAGTCAAAACCAAACAAACATTTCATTTACACATTTCTTTCTCTCTT
ATTACAAATTCAATGGCGGCCCCTATTCAAATTTCTATCGCCATAACCAC
CCTCTGTCTTCTCCAATTGCTTTCCGAAACATTGTCAGCGACATTCACAA
TCACAAACGAGTGCAGCAACACAATATGGCCAGGCATACTCTCAGGCGCA
GGAACCCCACAGCTCTCGCCCACTGGCTTCTCCTTGGAGGCAGGCCAGTC
CACTTCGATCTCTGTTCCAGCTTCTTGGTCAGGCCGCCTTTGGGCCCGCA
CTCACTGTACCCAAGATTCCAAATTCACTTGCCTGACCGGCGACTGTGGC
TCCGGCACTCTCGAATGCTCCGGCAGTGGCGCCGCCCCTCCCGCCACCCT
AGCTGAATTCACGTTGAACGGCGCAGGCGGCCTTGATTTCTTCGACGTCA
GCCTCGTGGACGGATATAATCTCCCCATGCTGGTCACACCTCAAACTCAA
AGCGGGACCGCTGGCAATTGTACGGCAGCTGGGTGTATTGCTGAATTGAA
CAATGCGTGTCCCTCGGAGCTCAAGGTTACAGAGGCCGGCAATGGTGAGG
ATGTTGCTTGCAAGAGCGCATGTGAAGCCTTTGGTGACCCCCAGTACTGC
TGCAGTGGAGCTTTCGCGACGCCGGATACTTGTAAACCCACTTCTTATTC
AATGTTCTTCAAGAATGCGTGCCCTAAAGCTTACAGCTACGCTTATGATG
ATGGTACCAGCACCTTCACCTGTGCCCCTGCCGATTATGTCATCACTTTC
TGTCCTAGCCCCAGTAACATTCTGAAATCGGCAAATGGGAAACTGCCGGG
TGGCGGCAATAAATCGGCCAACACTCCACGCACAAGTCCAA
back to top