DY304713
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY304713 vs. ExPASy Swiss-Prot
Match: SYC_PELPD (Cysteinyl-tRNA synthetase OS=Pelobacter propionicus (strain DSM 2379) GN=cysS PE=3 SV=1) HSP 1 Score: 317.775 bits (813), Expect = 4.990e-86 Identity = 152/258 (58.91%), Postives = 184/258 (71.32%), Query Frame = 2 Query: 80 LTLKIYNSMTQQKELFTPIVPGKVGMYICGVTAYDLSHLGHARAAVSFDLLYRYLEHLKYEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMGQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPXWHIECSAMSAHYLSSQFDIHGGGIDLIFPHPENEIAQNCAAWPDSNVSYWKANG 853 + L+IYN++T +K+ F P+ PGK GMY+CGVT YD H+GHARA V FD++YRYL + Y VTYVRNFTD+DDKII RAN G + ++S RY + + DMA L PT +P+ +DHMG I +I +I AY +GDV++AVE P+Y RLSG+ LE+ AG RV VD RKRNP DFALWK +K GEPSWDSPWG GRP WHIECSAMS YL FDIHGGG DL+FPH ENEIAQ+ AA V YW NG Sbjct: 1 MALRIYNTLTGEKDTFVPLHPGKAGMYVCGVTVYDYCHIGHARANVVFDVIYRYLGYSGYAVTYVRNFTDIDDKIINRANQEGVDYTTISERYIEAFNQDMARLGLAKPTVEPKATDHMGGIISVIETLIAKGHAYESDGDVYYAVESFPSYLRLSGRNLEDMLAGARVEVDDRKRNPMDFALWKGSKPGEPSWDSPWGAGRPGWHIECSAMSMEYLGKTFDIHGGGKDLVFPHHENEIAQSEAANGCQFVRYWMHNG 258
BLAST of DY304713 vs. ExPASy Swiss-Prot
Match: SYC_SYNFM (Cysteinyl-tRNA synthetase OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=cysS PE=3 SV=1) HSP 1 Score: 314.309 bits (804), Expect = 5.517e-85 Identity = 147/258 (56.98%), Postives = 187/258 (72.48%), Query Frame = 2 Query: 80 LTLKIYNSMTQQKELFTPIVPGKVGMYICGVTAYDLSHLGHARAAVSFDLLYRYLEHLKYEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMGQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPXWHIECSAMSAHYLSSQFDIHGGGIDLIFPHPENEIAQNCAAWPDSNVSYWKANG 853 + L +YN++T+ KE F P+ PGKV Y+CGVT YDLSH+GHAR+A+ FD++YRYL L +EVTYVRNFTDVDDKIIRRAND G + S++ RY + DM L L P +P ++++ + ++I +++ AY DVFF +EK P YG+LSG+++E+ AG RV VD+RKRNP DF LWK +K GEPSWDSPWGPGRP WHIECSAM + +L FDIHGGG DLIFPH ENEIAQ+ AA+ V YW NG Sbjct: 1 MVLHVYNTLTKSKEEFIPLEPGKVKFYVCGVTVYDLSHIGHARSAIVFDVIYRYLRFLGFEVTYVRNFTDVDDKIIRRANDAGTDCRSIAQRYIAAFYEDMDALGVLRPDLEPLATENVPGMIEIIRVLMDKGIAYQAGADVFFEIEKFPGYGKLSGRQIEDMLAGARVEVDARKRNPLDFVLWKGSKPGEPSWDSPWGPGRPGWHIECSAMGSRFLGKTFDIHGGGKDLIFPHHENEIAQSEAAFGMPFVRYWLHNG 258
BLAST of DY304713 vs. ExPASy Swiss-Prot
Match: SYC_THISH (Cysteinyl-tRNA synthetase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=cysS PE=3 SV=1) HSP 1 Score: 310.842 bits (795), Expect = 6.100e-84 Identity = 149/257 (57.98%), Postives = 190/257 (73.93%), Query Frame = 2 Query: 86 LKIYNSMTQQKELFTPIVPGKVGMYICGVTAYDLSHLGHARAAVSFDLLYRYLEHLKYEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMGQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPXWHIECSAMSAHYLSSQFDIHGGGIDLIFPHPENEIAQNCAAWPDSNVSYWKANG 853 L+I+NS+T++KE FTP+ PG+V MY+CG+T YD HLGHAR V FD++YRYL+ L ++VTY+RN TD+DDKIIRRA + GE+ +L++R+ D L LPP+ +PR ++H+ + MI ++ AY + GDV++AV K YGRLSG+RLE+ RAGERVA D KR+P DF LWKAAK GEP+WDSPWGPGRP WHIECSAMS HYL + FDIHGGG DL FPH ENEIAQ+ AA + V+YW NG Sbjct: 2 LQIHNSLTRRKETFTPMEPGRVRMYVCGMTVYDYCHLGHARVLVVFDVVYRYLKALGFDVTYIRNITDIDDKIIRRAAENGEDIRALTDRFIAAMHEDAEALGVLPPSAEPRATEHIDGMLAMIGTLVERGYAYAGDNGDVYYAVAKFEPYGRLSGKRLEDLRAGERVAPDEAKRDPLDFVLWKAAKPGEPAWDSPWGPGRPGWHIECSAMSTHYLGNHFDIHGGGQDLQFPHHENEIAQSEAATCEHFVNYWMHNG 258
BLAST of DY304713 vs. ExPASy Swiss-Prot
Match: SYC_SHELP (Cysteinyl-tRNA synthetase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=cysS PE=3 SV=1) HSP 1 Score: 307.76 bits (787), Expect = 5.164e-83 Identity = 143/257 (55.64%), Postives = 182/257 (70.82%), Query Frame = 2 Query: 86 LKIYNSMTQQKELFTPIVPGKVGMYICGVTAYDLSHLGHARAAVSFDLLYRYLEHLKYEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMGQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPXWHIECSAMSAHYLSSQFDIHGGGIDLIFPHPENEIAQNCAAWPDSNVSYWKANG 853 LK+YNS+T+QKE F PI PGKVGMY+CGVT YDL H+GH R V+FD++ RYL ++ Y+V + RN TDVDDKII+RA + GE+ +L+ R QE D L P ++PR + HM +I +M+ +++ D AY+ + GDV F+V P YGRLSGQ L+ +AG RV VD KR+P DF LWK +K GEP+WDSPWGPGRP WHIECSAM++ +L FDIHGGG DL FPH ENEIAQ+C A V+YW G Sbjct: 2 LKLYNSLTRQKEEFKPIQPGKVGMYVCGVTIYDLCHIGHGRTFVAFDMIVRYLRYIGYDVNFHRNITDVDDKIIKRATENGESCDALTERLTQEMYHDFDALNMKRPDFEPRATQHMPEIIEMVERLLERDHAYIADNGDVLFSVASFPEYGRLSGQNLDQLQAGARVEVDENKRDPMDFVLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHLGEHFDIHGGGSDLQFPHHENEIAQSCCAHDTPYVNYWMHTG 258
BLAST of DY304713 vs. ExPASy Swiss-Prot
Match: SYC_PELCD (Cysteinyl-tRNA synthetase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=cysS PE=3 SV=1) HSP 1 Score: 307.375 bits (786), Expect = 6.744e-83 Identity = 141/258 (54.65%), Postives = 187/258 (72.48%), Query Frame = 2 Query: 80 LTLKIYNSMTQQKELFTPIVPGKVGMYICGVTAYDLSHLGHARAAVSFDLLYRYLEHLKYEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMGQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPXWHIECSAMSAHYLSSQFDIHGGGIDLIFPHPENEIAQNCAAWPDSNVSYWKANG 853 ++L++YN+MT +KE F P+ PGKVGMY+CGVT YD H+GHARA V FD++YRYL+ + ++VTYVRN+TDVDDKII+RAN+ G + +L+ + Q + DM L PT QP+ + H+ I +++ ++I+ AY +GDV+F+VE P+Y +LS + ++ R+G R+ +KRNP DFALWKAAK GEPSW+SPWGPGRP WHIECSAMS YL FDIHGGG DL+FPH ENEIAQ+ A V YW NG Sbjct: 1 MSLRVYNTMTGRKEEFEPLQPGKVGMYVCGVTVYDYCHIGHARANVVFDIIYRYLQFIGFDVTYVRNYTDVDDKIIKRANERGISSDTLAGEFIQAFDEDMNRLGLAEPTIQPKATCHIDHIVNLVQRLIDRGIAYESQGDVYFSVEDFPSYLKLSKRNMDEMRSGARITPGEQKRNPMDFALWKAAKPGEPSWESPWGPGRPGWHIECSAMSMEYLGESFDIHGGGKDLVFPHHENEIAQSEGATGKPFVKYWLHNG 258
BLAST of DY304713 vs. ExPASy Swiss-Prot
Match: SYC_GEOLS (Cysteinyl-tRNA synthetase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=cysS PE=3 SV=1) HSP 1 Score: 305.449 bits (781), Expect = 2.563e-82 Identity = 143/258 (55.43%), Postives = 184/258 (71.32%), Query Frame = 2 Query: 80 LTLKIYNSMTQQKELFTPIVPGKVGMYICGVTAYDLSHLGHARAAVSFDLLYRYLEHLKYEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMGQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPXWHIECSAMSAHYLSSQFDIHGGGIDLIFPHPENEIAQNCAAWPDSNVSYWKANG 853 + L++YN+++ +KE F P V GKVGMY+CGVT YD H+GHARA + FD++YRYL Y+VTY+RN+TD+DDKII RAN G + ++++RY + DM L L PT +P+ +DH+ I +I ++I+N AY V+GDV+FAVE P Y +LSG+ L++ AG RV VD RKRNP DFALWK +K GEP W+SPWG GRP WHIECSAMS +L FDIHGGG DL+FPH ENEIAQ+ A V YW NG Sbjct: 1 MALRLYNTLSGEKEPFVPRVAGKVGMYVCGVTVYDFCHIGHARAGIVFDMIYRYLRFSGYDVTYIRNYTDIDDKIINRANQEGTDYRTIADRYIATFDEDMDRLGMLRPTIEPKATDHIEDIISIIQRLIDNGHAYAVDGDVYFAVETFPAYLKLSGRNLDDMLAGARVDVDERKRNPMDFALWKGSKPGEPWWESPWGKGRPGWHIECSAMSMRFLGPSFDIHGGGKDLVFPHHENEIAQSEGANGCQFVKYWLHNG 258
BLAST of DY304713 vs. ExPASy Swiss-Prot
Match: SYC_SHEHH (Cysteinyl-tRNA synthetase OS=Shewanella halifaxensis (strain HAW-EB4) GN=cysS PE=3 SV=1) HSP 1 Score: 304.294 bits (778), Expect = 5.709e-82 Identity = 144/257 (56.03%), Postives = 179/257 (69.65%), Query Frame = 2 Query: 86 LKIYNSMTQQKELFTPIVPGKVGMYICGVTAYDLSHLGHARAAVSFDLLYRYLEHLKYEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMGQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPXWHIECSAMSAHYLSSQFDIHGGGIDLIFPHPENEIAQNCAAWPDSNVSYWKANG 853 LK+YNS+T+QKE F P+ PGKVGMY+CGVT YDL H+GH R VSFD++ RYL + Y+V + RN TDVDDKII+RAN+ E+ SL+ R E D L P +PR + H+ +I DM+ ++I D AYV GDV F+V P YGRLSGQ LE +AG RV V+ KR+P DF LWK +K GEP+W+SPWGPGRP WHIECSAM++ +L + FDIHGGG DL FPH ENEIAQ+C A V+YW G Sbjct: 2 LKLYNSLTRQKEQFVPLQPGKVGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYSGYDVNFQRNITDVDDKIIKRANENNESCDSLTERLIAEMHKDFDSLNMARPDNEPRATQHIPEIIDMVERLIERDHAYVASSGDVLFSVSSFPEYGRLSGQNLEQLQAGARVEVEDTKRDPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPHHENEIAQSCCAHDTPYVNYWMHTG 258
BLAST of DY304713 vs. ExPASy Swiss-Prot
Match: SYC_SHEPW (Cysteinyl-tRNA synthetase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=cysS PE=3 SV=1) HSP 1 Score: 303.908 bits (777), Expect = 7.456e-82 Identity = 144/257 (56.03%), Postives = 180/257 (70.04%), Query Frame = 2 Query: 86 LKIYNSMTQQKELFTPIVPGKVGMYICGVTAYDLSHLGHARAAVSFDLLYRYLEHLKYEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMGQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPXWHIECSAMSAHYLSSQFDIHGGGIDLIFPHPENEIAQNCAAWPDSNVSYWKANG 853 LK+YN++T+QKE F PI PGK+GMY+CGVT YDL H+GH R VSFD++ RYL + YEV + RN TDVDDKII+RAN+ E+ SL+ R E D L P ++PR + HM +I +M+ ++I + AYV GDV F+V P YGRLSGQ LE +AG RV V+ KR+P DF LWK +K GEP+WDSPWGPGRP WHIECSAM++ +L + FDIHGGG DL FPH ENEIAQ+C A V+YW G Sbjct: 2 LKLYNTLTRQKEQFVPIQPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYSGYEVNFQRNITDVDDKIIKRANENNESCDSLTERLIGEMHRDFDSLNMARPDFEPRATLHMPEIIEMVEKLIAREHAYVAANGDVLFSVSSFPEYGRLSGQNLEQLQAGARVEVEDAKRDPMDFVLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPHHENEIAQSCCAHDTKYVNYWMHTG 258
BLAST of DY304713 vs. ExPASy Swiss-Prot
Match: SYC_SHESR (Cysteinyl-tRNA synthetase OS=Shewanella sp. (strain MR-7) GN=cysS PE=3 SV=1) HSP 1 Score: 303.138 bits (775), Expect = 1.272e-81 Identity = 143/257 (55.64%), Postives = 181/257 (70.43%), Query Frame = 2 Query: 86 LKIYNSMTQQKELFTPIVPGKVGMYICGVTAYDLSHLGHARAAVSFDLLYRYLEHLKYEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMGQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPXWHIECSAMSAHYLSSQFDIHGGGIDLIFPHPENEIAQNCAAWPDSNVSYWKANG 853 LKIYNS+T+QK+ F PI PGKVGMY+CGVT YDL H+GH R VSFD++ RYL + YEV + RN TD+DDKII+RAN+ E+ +L++R E D L + P ++PR + H+ +I DM+ +++ AYV +GDV F+V P YGRLSGQ LE +AG RV VD K+NP DF LWK +K GEP+W+SPWGPGRP WHIECSAM++ +L FDIHGGG DL FPH ENEIAQ+C A V+YW G Sbjct: 4 LKIYNSITRQKQEFKPITPGKVGMYVCGVTVYDLCHIGHGRTFVSFDMIVRYLRYAGYEVNFQRNITDIDDKIIKRANENQEDCNTLTDRLIGEMHKDFDALNMIRPDFEPRATLHIAEIIDMVERLLARGHAYVAADGDVLFSVASFPEYGRLSGQNLEQLQAGARVEVDDNKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQSCCAHDTPYVNYWMHTG 260
BLAST of DY304713 vs. ExPASy Swiss-Prot
Match: SYC_SHESA (Cysteinyl-tRNA synthetase OS=Shewanella sp. (strain ANA-3) GN=cysS PE=3 SV=1) HSP 1 Score: 303.138 bits (775), Expect = 1.272e-81 Identity = 143/257 (55.64%), Postives = 181/257 (70.43%), Query Frame = 2 Query: 86 LKIYNSMTQQKELFTPIVPGKVGMYICGVTAYDLSHLGHARAAVSFDLLYRYLEHLKYEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMGQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPXWHIECSAMSAHYLSSQFDIHGGGIDLIFPHPENEIAQNCAAWPDSNVSYWKANG 853 LKIYNS+T+QK+ F PI PGKVGMY+CGVT YDL H+GH R VSFD++ RYL + YEV + RN TD+DDKII+RAN+ E+ +L++R E D L + P ++PR + H+ +I DM+ +++ AYV +GDV F+V P YGRLSGQ LE +AG RV VD K+NP DF LWK +K GEP+W+SPWGPGRP WHIECSAM++ +L FDIHGGG DL FPH ENEIAQ+C A V+YW G Sbjct: 4 LKIYNSITRQKQEFKPITPGKVGMYVCGVTVYDLCHIGHGRTFVSFDMIVRYLRYAGYEVNFQRNITDIDDKIIKRANENQEDCNTLTDRLIGEMHKDFDALNMIRPDFEPRATLHIAEIIDMVERLLARGHAYVAADGDVLFSVASFPEYGRLSGQNLEQLQAGARVEVDDNKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQSCCAHDTPYVNYWMHTG 260 The following BLAST results are available for this feature:
BLAST of DY304713 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY304713 ID=DY304713; Name=DY304713; organism=Citrus clementina; type=EST; length=858bpback to top |