DY304715

Overview
NameDY304715
Unique NameDY304715
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length934
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY304715 vs. ExPASy Swiss-Prot
Match: SCMC1_MOUSE (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Mus musculus GN=Slc25a24 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.386e-15
Identity = 38/137 (27.74%), Postives = 73/137 (53.28%), Query Frame = 2
Query:  410 ERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIKEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFGKWRDFLSIYP 820
            E   R  +LF   D    G +D  +++ GL +L IP      + +F   D N+DG++D++EF +Y+   E ++   F+++D  ++G I P E+  +L   G+ IS+++    ++ +D D    + + +WRD+    P
Sbjct:   19 EPPTRYETLFRALDRNGDGVVDIGELQQGLQSLGIPLGQDAEEKIFTTGDVNKDGKLDFEEFMKYLKDHEKKMKLAFKSLDKNNDGKIEPSEIVQSLQMLGLHISEKQAELILQSIDSDGTMTVDWNEWRDYFLFNP 155          
BLAST of DY304715 vs. ExPASy Swiss-Prot
Match: SCMC1_HUMAN (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Homo sapiens GN=SLC25A24 PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.533e-14
Identity = 40/149 (26.85%), Postives = 75/149 (50.34%), Query Frame = 2
Query:  374 DHVLLALRESKEERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIKEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFGKWRDFLSIYP 820
            D VL        E+  R  +LF   D    G +D  +++ GL  L IP      + +F   D N+DG++D++EF +Y+   E ++   F+++D  ++G I   E+  +L   G+ IS+++    ++ +D D    + + +WRD+    P
Sbjct:    7 DFVLPTAACQDAEQPTRYETLFQALDRNGDGVVDIGELQEGLRNLGIPLGQDAEEKIFTTGDVNKDGKLDFEEFMKYLKDHEKKMKLAFKSLDKNNDGKIEASEIVQSLQTLGLTISEQQAELILQSIDVDGTMTVDWNEWRDYFLFNP 155          
BLAST of DY304715 vs. ExPASy Swiss-Prot
Match: SCMC1_RABIT (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Oryctolagus cuniculus GN=SLC25A24 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 2.002e-14
Identity = 37/137 (27.01%), Postives = 72/137 (52.55%), Query Frame = 2
Query:  410 ERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIKEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFGKWRDFLSIYP 820
            E   R  +LF   D    G +D  +++ GL +L IP      + +F   D N+DG++D++EF +Y+   E ++   F+++D  ++G I   E+  +L   G+ IS+++    ++ +D D    + + +WRD+    P
Sbjct:   19 EPPTRYETLFQALDRNGDGVVDIRELQEGLKSLGIPLGQDAEEKIFTTGDVNKDGKLDFEEFMKYLKDHEKKMKLAFKSLDKNNDGKIEASEIVQSLQTLGLTISEQQAELILQSIDADGTMTVDWNEWRDYFLFNP 155          
BLAST of DY304715 vs. ExPASy Swiss-Prot
Match: SCMC1_BOVIN (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Bos taurus GN=SLC25A24 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.614e-14
Identity = 37/137 (27.01%), Postives = 73/137 (53.28%), Query Frame = 2
Query:  410 ERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIKEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFGKWRDFLSIYP 820
            E   R  +LF   D    G +D ++++ GL +L IP      + +F   D N+DG++D++EF +Y+   E ++   F+++D  ++G I   E+  +L   G+ IS+++    ++ +D D    + + +WRD+    P
Sbjct:   19 EPPTRYETLFQKLDRNGDGVVDISELQEGLKSLGIPLGQDAEEKIFTTGDVNKDGKLDFEEFMKYLKDHEKKMKLAFKSLDKNNDGKIEASEIVQSLQILGLTISEQQAELILQSIDADGTMTVDWNEWRDYFLFNP 155          
BLAST of DY304715 vs. ExPASy Swiss-Prot
Match: SCMC2_XENTR (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Xenopus tropicalis GN=slc25a25 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.874e-12
Identity = 45/188 (23.94%), Postives = 90/188 (47.87%), Query Frame = 2
Query:  266 TGAGAGHAVERVGLPKMESTRSAS-CNPVRKSGPVTMDHVLLALRESKEERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIKEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFGKWRDFLSIYPHE 826
            T  GA H  +    P + +  +A  C  +   GP               E + R++ LF   D    G +    +  GL  L +       + + K  D ++DG++D++EF  Y+   E +L  +F+++D +++G I  +E+  +L   G+ IS+++  + ++ +DK+    I + +WRD+  ++P E
Sbjct:   21 TVGGAPHTHDTPASPSLAAALAADPCGGLVCGGP---------------EHETRLQILFQELDVNKDGGICINDLAVGLKRLGVHRTELELRKIVKAGDKDQDGQLDFEEFVHYLRDHEKKLRLVFKSLDKKNDGRIDAQEIMQSLRDLGVNISEQQAEKILKSMDKNGTMTIDWNEWRDYHLLHPAE 193          
BLAST of DY304715 vs. ExPASy Swiss-Prot
Match: SCMC2_XENLA (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Xenopus laevis GN=slc25a25 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.214e-11
Identity = 45/189 (23.81%), Postives = 90/189 (47.62%), Query Frame = 2
Query:  266 TGAGAGHAVERVGLPKMESTRSAS--CNPVRKSGPVTMDHVLLALRESKEERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIKEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFGKWRDFLSIYPHE 826
            T +GA H+ E    P + +   A+  C  +   GP               E + R++ LF   D    G +    +  GL  L +       + + K  D ++DG++D+ EF  Y+   E +L  +F+++D +++G I  +E+  +L   G+ IS+++  + ++ +DK+    I + +WRD+  ++  E
Sbjct:   21 TVSGAPHSHETPASPSLAAAALAADPCGGLLCGGP---------------EHERRLQILFQELDVNKDGAICINDLAVGLKRLGVHRTELELRKIVKAGDKDQDGQLDFDEFVHYLRDHEKKLRLVFKSLDKKNDGRIDAQEIMQSLRDLGVNISEQQAEKILKSMDKNGTMTIDWNEWRDYHLLHSAE 194          
BLAST of DY304715 vs. ExPASy Swiss-Prot
Match: MCFC_DICDI (Mitochondrial substrate carrier family protein C OS=Dictyostelium discoideum GN=mcfC PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.214e-11
Identity = 37/134 (27.61%), Postives = 71/134 (52.99%), Query Frame = 2
Query:  425 IRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIKEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEI-SDEELARFVEHVDKDNNGIITFGKWRDFLSIYPH 823
            ++ LF+  D  N+G L   +I+ G   L+IP+  K  +      D ++DG V ++EF  +      +L  +F+ +D   +G +   E+ +++ K  I + S++EL R    +DK+ +  I F +WR+ L + P+
Sbjct:   11 VKKLFDSLDKDNNGKLTREEIKEGFFKLRIPSSEKDIESFLTNVDKDKDGSVSFKEFEDFTIENIKKLKIVFEELDTNKSGTLDIHEIEESIKKLNIPLYSEQELIRLFHRIDKNRDNQIDFNEWRELLVLLPN 144          
BLAST of DY304715 vs. ExPASy Swiss-Prot
Match: SCM1A_XENLA (Calcium-binding mitochondrial carrier protein SCaMC-1-A OS=Xenopus laevis GN=slc25a24-A PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 6.027e-11
Identity = 35/133 (26.32%), Postives = 66/133 (49.62%), Query Frame = 2
Query:  422 RIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIKEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFGKWRDFLSIYP 820
            R   LF+  D    G +D  +++ GL A+ +       + + +  D N+DG +D+ EF RY++  E ++   F ++D   +G I   E+ ++L   GI IS +   + ++ +D D    + + +WRD     P
Sbjct:   23 RYAELFHKLDVNKDGKVDILELQEGLKAMGMAVGKGAEEKIVEAGDTNKDGHLDFGEFMRYLEEHEKKMKIAFTSLDKNKDGKIESSEVMNSLKTLGINISLDHAEKILKSMDSDGTLTVDWNEWRDHFLFNP 155          
BLAST of DY304715 vs. ExPASy Swiss-Prot
Match: SCMC1_XENTR (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Xenopus tropicalis GN=slc25a24 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.871e-11
Identity = 36/133 (27.07%), Postives = 65/133 (48.87%), Query Frame = 2
Query:  422 RIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIKEMELYKIFQTIDVEHNGCILPEELWDALVKAGIEISDEELARFVEHVDKDNNGIITFGKWRDFLSIYP 820
            R   LF+  D    G +D  +++ GL A+ +       + +    D N+DG +D+ EF RY++  E ++   F ++D   +G I   E+ ++L   GI IS E   + ++ +D D    + + +WRD     P
Sbjct:   23 RYAELFHKLDVNKDGKVDIVELQEGLKAMGMAVGKGAEEKIVAAGDTNKDGHLDFGEFIRYLEEHEKKMKIAFTSLDKNKDGKIESAEIMNSLKTLGINISLEHAEKILKSMDADGTLTVDWNEWRDHFLFNP 155          
The following BLAST results are available for this feature:
BLAST of DY304715 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
SCMC1_MOUSE1.386e-1527.74Calcium-binding mitochondrial carrier protein SCaM... [more]
SCMC1_HUMAN1.533e-1426.85Calcium-binding mitochondrial carrier protein SCaM... [more]
SCMC1_RABIT2.002e-1427.01Calcium-binding mitochondrial carrier protein SCaM... [more]
SCMC1_BOVIN2.614e-1427.01Calcium-binding mitochondrial carrier protein SCaM... [more]
SCMC2_XENTR1.874e-1223.94Calcium-binding mitochondrial carrier protein SCaM... [more]
SCMC2_XENLA1.214e-1123.81Calcium-binding mitochondrial carrier protein SCaM... [more]
MCFC_DICDI1.214e-1127.61Mitochondrial substrate carrier family protein C O... [more]
SCM1A_XENLA6.027e-1126.32Calcium-binding mitochondrial carrier protein SCaM... [more]
SCMC1_XENTR7.871e-1127.07Calcium-binding mitochondrial carrier protein SCaM... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAQ9YI01RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304715 ID=DY304715; Name=DY304715; organism=Citrus clementina; type=EST; length=934bp
TACATTCCGCGAACATAAAAATAAAATAAAAAATTATTATTTTTGAAAAT
TCACTATTTTGTGCTCCTTTTAGAAATCGCCTCATAAGTTCACCAATCAG
CTGTCTCAATTGAGAATTTTGACTCTTTCGTTTGACTCATCATCGGAAAA
GGAAACGATTTTTCAATTTCCTTTATCAGATTATACATACAAGTTCCAGA
TTGAATCGATGCTTGTGGAGCAACAATCGAATCTCGTAATTTTGATTAAA
ATCTAGGGGCAGATGACCGGAGCAGGGGCAGGACACGCGGTGGAACGCGT
CGGATTGCCAAAGATGGAGTCGACCCGCTCCGCTTCATGCAACCCGGTGA
GGAAATCGGGTCCGGTCACGATGGACCACGTGCTGCTCGCGTTACGCGAG
AGCAAGGAAGAGAGGGACATCCGAATCCGGAGCCTCTTCAATTTCTTCGA
TGCGGCGAATTCCGGATACTTGGATTACGCGCAGATCGAGAGCGGGTTGT
CGGCGCTGCAGATTCCGGCACAGTACAAGTACGCGAAGGATTTGTTCAAA
GTCTGCGACGCAAACAGAGACGGACGCGTCGATTATCAGGAGTTTCGTCG
ATACATGGACATTAAAGAGATGGAGCTTTATAAGATTTTTCAAACTATTG
ATGTCGAGCACAATGGATGCATTTTGCCCGAAGAGCTTTGGGACGCGCTT
GTTAAGGCTGGGATCGAGATTAGTGACGAGGAATTGGCTCGTTTTGTGGA
GCATGTTGATAAGGATAATAATGGAATCATAACTTTTGGAAAATGGAGAG
ATTTCCTTTCTATCTATCCTCATGAGGCAACTATTGGAAAATATTTATCA
TCATTGGGAGAAGGAATGCCTCGTAAAATATTGGAGAACAGGCTGGTTAT
TCCAGAAGGCATCAGTTAAACTTGTTCAAAGAAA
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