DY304720

Overview
NameDY304720
Unique NameDY304720
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length986
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY304720 vs. ExPASy Swiss-Prot
Match: PTR2X_ARATH (Probable peptide transporter At1g52190 OS=Arabidopsis thaliana GN=At1g52190 PE=1 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 1.392e-61
Identity = 128/276 (46.38%), Postives = 163/276 (59.06%), Query Frame = 2
Query:    2 KNPKGGIRTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLACDYTLRDS-CESATGSQLMLLYXXXXXXXXXXXXXXXXXXAFGADQLEKGDGIKSKSEGALKXXXXXXXXXXXXXXXXXXTFIVYIQDNLGWKVGFGIPAAIMLLSALCFFLASPFYVKSKANTSLLSGLIPVLVASYKNPHKKLTSPQAAGKRYHHKKGSVRLVPSENLK 826
            K  KGGI T+PFIIANEAFE++AS G +PNMI+YL R+Y   + +GTNVLF WSAASNF P+LGAFL+DSY+GR+  I    ++  LGMVLLWLT + P  +P  CD T   S C S+T SQL LLY                  AFGADQL+  +    K+E  L+                  T IVYIQ++LGWK+GFG+PA +ML++AL F LASP YV      SL +GL   +VA+YK     L     +   Y+H K S    PS+ L+
Sbjct:   19 KKTKGGIITMPFIIANEAFEKVASYGLLPNMIMYLIRDYRFGVAKGTNVLFMWSAASNFTPLLGAFLSDSYLGRFLTISIASLSSFLGMVLLWLTAMLPQVKPSPCDPTAAGSHCGSSTASQLALLYSAFALISIGSGGIRPCSLAFGADQLDNKE--NPKNERVLESFFGWYYASSAVAVLIAFTGIVYIQEHLGWKIGFGVPAVLMLIAALLFILASPLYVTRGVTKSLFTGLAQAIVAAYKKRKLSLPDHHDSFDCYYHMKDSEIKAPSQKLR 292          
BLAST of DY304720 vs. ExPASy Swiss-Prot
Match: PTR3A_ARATH (Peptide transporter PTR3-A OS=Arabidopsis thaliana GN=PTR3-A PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.360e-24
Identity = 71/276 (25.72%), Postives = 121/276 (43.84%), Query Frame = 2
Query:   11 KGGIRTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYXXXXXXXXXXXXXXXXXXAFGADQLEKGDGIKSKSEGALKXXXXXXXXXXXXXXXXXXTFIVYIQDNLGWKVGFGIPAAIMLLSALCFFLASPFYVKSKANTSLLSGLIPVLVASYKNPH----KKLTSPQAAGKRYHHKKGSVRLVPSENLK 826
            +G  +   F++  E FERMA  G   N+ +Y+  + +    + +N +  W   S   PILGA++ D+ +GRY      C     GM++L L+   P  +P  C  T  ++CE A+  QL + +                    GADQ +  D    K +                      T +VY+QDN+GW +G+G+P   + +S   F L +PFY       S  + +  V+VAS++  +      +TS        + +KG+  + P+ +L+
Sbjct:   28 RGRWKACSFVVVYEVFERMAYYGISSNLFIYMTTKLHQGTVKSSNNVTNWVGTSWLTPILGAYVGDALLGRYITFVISCAIYFSGMMVLTLSVTIPGIKPPECSTTNVENCEKASVLQLAVFFGALYTLAIGTGGTKPNISTIGADQFDVFD---PKEKTQKLSFFNWWMFSIFFGTLFANTVLVYVQDNVGWTLGYGLPTLGLAISITIFLLGTPFYRHKLPTGSPFTKMARVIVASFRKANAPMTHDITSFHELPSLEYERKGAFPIHPTPSLR 300          
BLAST of DY304720 vs. ExPASy Swiss-Prot
Match: PTR1_ARATH (Peptide transporter PTR1 OS=Arabidopsis thaliana GN=PTR1 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.965e-23
Identity = 78/281 (27.76%), Postives = 123/281 (43.77%), Query Frame = 2
Query:    2 KNPKGGIRTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYXXXXXXXXXXXXXXXXXXAFGADQLEKGDGIKSKSEGALKXXXXXXXXXXXXXXXXXXTFIVYIQDNLGWKVGFGIPAAIMLLSALCFFLASPFYVKSKANTSLLSGLIPVLVASYKNPHKKLTSPQA----AGKRYHHKKGSVRLVPSENLKVF 832
            K   G  +   FI+ NE  ER+A  G   N++ YL    N       N +  WS      P++GAF+AD+Y+GRY  I       + GM LL L+   P  +P  C+    D+C     SQ  + +                  +FGADQ ++ D  +   + +                    T +V+IQ N+GW  GFG+P   M+++   FF  S FY   +   S L+ +  V+VA+++    K+   ++          + KGS +LV ++NLK F
Sbjct:   22 KEKTGNWKACRFILGNECCERLAYYGMGTNLVNYLESRLNQGNATAANNVTNWSGTCYITPLIGAFIADAYLGRYWTIATFVFIYVSGMTLLTLSASVPGLKPGNCN---ADTCH-PNSSQTAVFFVALYMIALGTGGIKPCVSSFGADQFDENDENEKIKKSSF---FNWFYFSINVGALIAATVLVWIQMNVGWGWGFGVPTVAMVIAVCFFFFGSRFYRLQRPGGSPLTRIFQVIVAAFRKISVKVPEDKSLLFETADDESNIKGSRKLVHTDNLKFF 295          
BLAST of DY304720 vs. ExPASy Swiss-Prot
Match: PTR5_ARATH (Peptide transporter PTR5 OS=Arabidopsis thaliana GN=PTR5 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 7.418e-23
Identity = 73/275 (26.55%), Postives = 119/275 (43.27%), Query Frame = 2
Query:    2 KNPKGGIRTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYXXXXXXXXXXXXXXXXXXAFGADQLEKGDGIKSKSEGALKXXXXXXXXXXXXXXXXXXTFIVYIQDNLGWKVGFGIPAAIMLLSALCFFLASPFYVKSKANTSLLSGLIPVLVASYKNPHKKLTSPQAAGKRYHHKKGSVRLVPSENLK 826
            KN  G  +   FI+  E  ER+A  G   N+I YL ++ NM+    +  +  WS      P++GAF+AD+Y+GRY  I    +  + GM LL ++   P   P     T       AT  Q  + +                  +FGADQ +  D  + +S+ +                    + +V+IQ N+GW  G G+P   M ++ + FF  S FY   K   S L+ ++ V+VAS +    K+  P+     Y ++     ++ S  L+
Sbjct:   23 KNKTGTWKACRFILGTECCERLAYYGMSTNLINYLEKQMNMENVSASKSVSNWSGTCYATPLIGAFIADAYLGRYWTIASFVVIYIAGMTLLTISASVPGLTPTCSGETCH-----ATAGQTAITFIALYLIALGTGGIKPCVSSFGADQFDDTDEKEKESKSSF---FNWFYFVINVGAMIASSVLVWIQMNVGWGWGLGVPTVAMAIAVVFFFAGSNFYRLQKPGGSPLTRMLQVIVASCRK--SKVKIPEDESLLYENQDAESSIIGSRKLE 287          

HSP 2 Score: 22.3274 bits (46), Expect = 7.418e-23
Identity = 16/39 (41.03%), Postives = 19/39 (48.72%), Query Frame = 3
Query:  864 TKLDSK*KTLGSLEVLFTVNPVEELKTIESREFLFWAPG 980
            T+ D+K     S   L TV  VEELK +  R    WA G
Sbjct:  302 TESDNKGAAKSSSWKLCTVTQVEELKAL-IRLLPIWATG 339          
BLAST of DY304720 vs. ExPASy Swiss-Prot
Match: PTR2_ARATH (Peptide transporter PTR2 OS=Arabidopsis thaliana GN=PTR2 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.273e-22
Identity = 74/250 (29.60%), Postives = 109/250 (43.60%), Query Frame = 2
Query:    2 KNPKGGIRTLPFIIANEAFERMASTGFMPNMILYLCREYNM-KITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYXXXXXXXXXXXXXXXXXXAFGADQLEKGDGIKSKSEGALKXXXXXXXXXXXXXXXXXXTFIVYIQDNLGWKVGFGIPAAIMLLSALCFFLASPFYVKSKANTSLLSGLIPVLVASYKNPHKKL 748
            K   G  +  PFI+ NE  ER+A  G   N+I YL  + +   ++  TNV   W       P++GA LAD+Y GRY  I        +GM  L L+   P  +P  C   + D C SAT +Q  + +                  +FGADQ +  D   S+                        + +V+IQ+N GW +GFGIP   M L+   FF  +P Y   K   S ++ +  V+VAS++    K+
Sbjct:   39 KEKTGNWKACPFILGNECCERLAYYGIAGNLITYLTTKLHQGNVSAATNVTT-WQGTCYLTPLIGAVLADAYWGRYWTIACFSGIYFIGMSALTLSASVPALKPAEC---IGDFCPSATPAQYAMFFGGLYLIALGTGGIKPCVSSFGADQFDDTD---SRERVRKASFFNWFYFSINIGALVSSSLLVWIQENRGWGLGFGIPTVFMGLAIASFFFGTPLYRFQKPGGSPITRISQVVVASFRKSSVKV 281          
BLAST of DY304720 vs. ExPASy Swiss-Prot
Match: PTR3B_ARATH (Peptide transporter PTR3-B OS=Arabidopsis thaliana GN=PTR3-B PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.408e-21
Identity = 65/251 (25.90%), Postives = 108/251 (43.03%), Query Frame = 2
Query:    2 KNPKGGIRTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYXXXXXXXXXXXXXXXXXXAFGADQLEKGDGIKSKSEGALKXXXXXXXXXXXXXXXXXXTFIVYIQDNLGWKVGFGIPAAIMLLSALCFFLASPFYVKSKANTSLLSGLIPVLVASYKNPHKKLTS 754
            ++  G  +   F++  E FERMA  G   N+++Y+  + +    + +N +  W   S   PILGA++AD++ GRY          LLGM LL L+   P  +P  C     ++CE A+  QL + +                    GADQ ++ D    K +                      T +VY+QDN+GW +G+G+    +  S   F L +  Y       S  + +  V+VAS +   + ++S
Sbjct:   25 RSQTGRWKACSFVVVYEVFERMAYYGISSNLVIYMTTKLHQGTVKSSNNVTNWVGTSWLTPILGAYVADAHFGRYITFVISSAIYLLGMALLTLSVSLPGLKPPKCSTANVENCEKASVIQLAVFFGALYTLAIGTGGTKPNISTIGADQFDEFD---PKDKIHKHSFFNWWMFSIFFGTFFATTVLVYVQDNVGWAIGYGLSTLGLAFSIFIFLLGTRLYRHKLPMGSPFTKMARVIVASLRKAREPMSS 272          
BLAST of DY304720 vs. ExPASy Swiss-Prot
Match: CHL1_ARATH (Nitrate/chlorate transporter OS=Arabidopsis thaliana GN=CHL1 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.557e-20
Identity = 70/252 (27.78%), Postives = 113/252 (44.84%), Query Frame = 2
Query:    2 KNPKGGIRTLPFIIANEAFERMASTGFMPNMILYLCREYNMKITEGTNVLFFWSAASNFLPILGAFLADSYVGRYAMIGFGCITCLLGMVLLWLTTIFPHARPLACDYTLRDSCESATGSQLMLLYXXXXXXXXXXXXXXXXXXAFGADQLEKGDGIKSKSEGALKXXXXXXXXXXXXXXXXXXTFIVYIQDNLGWKVGFGIPAAIMLLSALCFFLASPFYVKSKANTSLLSGLIPVLVASYKNPHKKLTSP 757
            ++  GG  +   I+  EA ER+ + G   N++ YL    ++      N +  +   S  L +LG F+AD+++GRY  I         G+ +L L+TI P  RP  C+ T    CE A+G QL +LY                   FG+DQ    D  + K    +                   T +VY+QD++G K G+GI A  ++L+   F   +  Y   K   S ++ +  V+VA+++N  +KL  P
Sbjct:   25 RSKTGGWASAAMILCIEAVERLTTLGIGVNLVTYLTGTMHLGNATAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFAAIQATGVSILTLSTIIPGLRPPRCNPTTSSHCEQASGIQLTVLYLALYLTALGTGGVKASVSGFGSDQF---DETEPKERSKMTYFFNRFFFCINVGSLLAVTVLVYVQDDVGRKWGYGICAFAIVLALSVFLAGTNRYRFKKLIGSPMTQVAAVIVAAWRN--RKLELP 271          
The following BLAST results are available for this feature:
BLAST of DY304720 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
PTR2X_ARATH1.392e-6146.38Probable peptide transporter At1g52190 OS=Arabidop... [more]
PTR3A_ARATH1.360e-2425.72Peptide transporter PTR3-A OS=Arabidopsis thaliana... [more]
PTR1_ARATH1.965e-2327.76Peptide transporter PTR1 OS=Arabidopsis thaliana G... [more]
PTR5_ARATH7.418e-2326.55Peptide transporter PTR5 OS=Arabidopsis thaliana G... [more]
PTR2_ARATH1.273e-2229.60Peptide transporter PTR2 OS=Arabidopsis thaliana G... [more]
PTR3B_ARATH1.408e-2125.90Peptide transporter PTR3-B OS=Arabidopsis thaliana... [more]
CHL1_ARATH1.557e-2027.78Nitrate/chlorate transporter OS=Arabidopsis thalia... [more]
back to top
Properties
Property NameValue
Genbank descriptionKN0AAQ9YI07RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304720 ID=DY304720; Name=DY304720; organism=Citrus clementina; type=EST; length=986bp
CAAAAACCCAAAGGGTGGCATCAGAACCTTGCCTTTCATCATTGCAAATG
AAGCATTTGAGAGGATGGCGAGTACTGGGTTTATGCCAAACATGATACTG
TATCTGTGCAGAGAATATAACATGAAAATAACAGAAGGTACGAACGTACT
CTTCTTTTGGTCAGCTGCTTCAAATTTTCTGCCGATTCTTGGGGCCTTTC
TCGCCGATTCCTATGTGGGCCGGTATGCGATGATCGGTTTCGGTTGCATC
ACTTGCCTTTTGGGGATGGTTCTGTTGTGGCTGACGACAATCTTCCCCCA
CGCCAGGCCTCTAGCTTGTGACTACACACTAAGAGATAGTTGTGAATCCG
CTACAGGGTCTCAATTGATGCTGTTGTATTTGGCTTTTGGTCTCATGTCG
CTTGGAGGTGGTGGCATACGGTCATCCTCTTTAGCCTTTGGTGCTGATCA
GTTGGAAAAGGGAGATGGCATCAAAAGTAAAAGTGAAGGTGCCTTAAAGA
GTTACTTCAGCTGGTATTATGTTTCGGTCTCGGCGTCATCTATGGTTGCC
GTGACTTTTATTGTTTATATTCAAGATAACTTGGGCTGGAAGGTGGGGTT
TGGAATTCCTGCCGCAATAATGTTGTTATCAGCTCTTTGCTTTTTTCTGG
CTTCTCCCTTTTATGTCAAGTCAAAAGCTAACACAAGCTTGCTTTCTGGA
TTAATTCCAGTCCTTGTTGCCTCGTATAAGAATCCACATAAAAAGTTAAC
ATCACCTCAGGCTGCCGGAAAAAGGTACCACCACAAAAAAGGATCCGTGC
GTCTCGTGCCAAGTGAAAATTTAAAGGTGTTTGGACAAAACTTGTATAAT
CCAACATCCCTGAACAAAACTTGACTCCAAATGAAAAACCCTCGGATCCC
TTGAAGTCCTTTTTACAGTCAATCCAGTTGAAGAATTAAAAACCATTGAA
TCAAGGGAATTCCTTTTTTGGGCTCCGGGGAAAAAG
back to top