DY304736
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY304736 vs. ExPASy Swiss-Prot
Match: C3H58_ARATH (Zinc finger CCCH domain-containing protein 58 OS=Arabidopsis thaliana GN=At5g18550 PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 8.441e-44 Identity = 82/126 (65.08%), Postives = 96/126 (76.19%), Query Frame = 2 Query: 296 MERHGRVSEG-SQSDPSPEWTAPGTETGPE---------GLGVGAESYPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQYYMRTGTCKYGASCKYHHPRRG 643 MER+G E S+SDPS EW+A GTETG E G G G E++PERPDE DCI+Y+RTG C YGSRCRFNHPR+R V+G R GEFPER+GQPVCQ++MRTGTCK+GASCKYHHPR+G Sbjct: 1 MERYGGAGEDESRSDPSHEWSAQGTETGIEASMWRLGLRGGGGGGETFPERPDEPDCIYYLRTGVCGYGSRCRFNHPRNRAPVLGGLRTEAGEFPERMGQPVCQHFMRTGTCKFGASCKYHHPRQG 126 HSP 2 Score: 77.7962 bits (190), Expect = 9.102e-14 Identity = 33/95 (34.74%), Postives = 58/95 (61.05%), Query Frame = 2 Query: 353 TAPGTETGPEGLGVG--AESYPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQYYMRTGTCKYGASCKYHH 631 +AP ++GP GV +++P+RP++ +C +++RTG C +G+ CRF+HP + S + + G P R G C ++ + G CK+G +CK+ H Sbjct: 277 SAPAYQSGPSSTGVSNKEQTFPQRPEQPECQYFMRTGDCKFGTSCRFHHPMEAASPEASTLSHIG-LPLRPGAVPCTHFAQHGICKFGPACKFDH 370
BLAST of DY304736 vs. ExPASy Swiss-Prot
Match: C3H34_ARATH (Zinc finger CCCH domain-containing protein 34 OS=Arabidopsis thaliana GN=At3g06410 PE=2 SV=2) HSP 1 Score: 177.178 bits (448), Expect = 1.102e-43 Identity = 83/129 (64.34%), Postives = 95/129 (73.64%), Query Frame = 2 Query: 296 MERHGRVSE-GSQSDPSPEWTAPGTETGPE------------GLGVGAESYPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQYYMRTGTCKYGASCKYHHPRRG 643 MER+GR E GS+SDPS EWT+ G ET E G G G ESYPERPDE DCI+Y+RTG C YGSRCRFNHPRDRG+V+G R G PER+G PVCQ++MRTGTCK+GASCKYHHPR+G Sbjct: 1 MERYGRPGEEGSRSDPSLEWTSHGGETAVEAPMWRLGLSGGGGGGGGGESYPERPDEPDCIYYLRTGVCGYGSRCRFNHPRDRGAVIGGVRGEAGALPERMGHPVCQHFMRTGTCKFGASCKYHHPRQG 129 HSP 2 Score: 69.707 bits (169), Expect = 2.479e-11 Identity = 33/98 (33.67%), Postives = 51/98 (52.04%), Query Frame = 2 Query: 341 SPEWTA-PGTETGPEGLGVGAESYPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQYYMRTGTCKYGASCKYHH 631 SP TA GT ++ +P+RPD+ +C +++RTG C +GS CR++HP D P R G C ++ + G CK+G +CK+ H Sbjct: 281 SPSATAYTGTYQSVPSSNSTSKEFPQRPDQPECQYFMRTGDCKFGSSCRYHHPVDAVPPKTGIVLSSIGLPLRPGVAQCTHFAQHGICKFGPACKFDH 378
BLAST of DY304736 vs. ExPASy Swiss-Prot
Match: C3H32_ARATH (Zinc finger CCCH domain-containing protein 32 OS=Arabidopsis thaliana GN=At2g47850 PE=2 SV=2) HSP 1 Score: 146.747 bits (369), Expect = 1.596e-34 Identity = 66/129 (51.16%), Postives = 89/129 (68.99%), Query Frame = 2 Query: 323 GSQSDPSPEWTAPGTETGPEG----LGVGAESYPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQYYMRTGTCKYGASCKYHHPRRGAWFLLAMCH*IIMVYPLP 697 GSQS +P+WT +TG + LG+G++SYPERP DC +Y+RTG C YG+RCR+NHPRDR SV RA G++PER G+P CQ+Y++TGTCK+GASCK+HHP+ +M H + +Y P Sbjct: 10 GSQSAQAPDWTPADADTGLQESMWRLGLGSDSYPERPGAPDCAYYMRTGVCGYGNRCRYNHPRDRASVEATVRA-TGQYPERFGEPPCQFYLKTGTCKFGASCKFHHPKNAGG---SMSHVPLNIYGYP 134 HSP 2 Score: 81.2629 bits (199), Expect = 8.233e-15 Identity = 37/107 (34.58%), Postives = 61/107 (57.01%), Query Frame = 2 Query: 314 VSEGSQSDPSPEWTAPGTETGPEGLGVGAESYPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQYYMRTGTCKYGASCKYHHP 634 V++ + + PS P + P G+ +++PERP E +C +Y++TG C +G+ C+F+HPRDR P R G C +Y++ G CK+G++CK+ HP Sbjct: 256 VTQLTSTTPSLPGVYPSLSS-PTGVIQKEQAFPERPGEPECQYYLKTGDCKFGTSCKFHHPRDRVPPRANCVLSPIGLPLRPGVQRCTFYVQNGFCKFGSTCKFDHP 361
BLAST of DY304736 vs. ExPASy Swiss-Prot
Match: C3H33_ARATH (Zinc finger CCCH domain-containing protein 33 OS=Arabidopsis thaliana GN=ZFN1 PE=1 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.709e-28 Identity = 52/81 (64.20%), Postives = 64/81 (79.01%), Query Frame = 2 Query: 404 SYPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQYYMRTGTCKYGASCKYHHPRRGA 646 SYPERP E DC +Y+RTG C +GS CRFNHPRDR V+ AR GE+PER+GQP C+YY++TGTCK+G +CK+HHPR A Sbjct: 36 SYPERPGEPDCSYYIRTGLCRFGSTCRFNHPRDRELVIATARM-RGEYPERIGQPECEYYLKTGTCKFGVTCKFHHPRNKA 115 HSP 2 Score: 87.4261 bits (215), Expect = 1.149e-16 Identity = 43/117 (36.75%), Postives = 66/117 (56.41%), Query Frame = 2 Query: 296 MERHGRVSEGSQSDPSPEWTAPGTETGPEGL-GVGAES-YPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQYYMRTGTCKYGASCKYHHPRR 640 ++++ + GSQS S PG+ G + E+ +PERP + +C Y++TG C +G+ C+F+HPRDR + P R G+P+C +Y R G CK+G SCK+ HP R Sbjct: 232 LQQNETIESGSQSQGSFSGYNPGSSVPLGGYYALPRENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQAPPPDCLLSSIGLPLRPGEPLCVFYTRYGICKFGPSCKFDHPMR 348
BLAST of DY304736 vs. ExPASy Swiss-Prot
Match: C3H6_ORYSJ (Zinc finger CCCH domain-containing protein 6 OS=Oryza sativa subsp. japonica GN=Os01g0258700 PE=2 SV=2) HSP 1 Score: 125.946 bits (315), Expect = 2.915e-28 Identity = 54/100 (54.00%), Postives = 68/100 (68.00%), Query Frame = 2 Query: 374 GPEGLGVGAESYPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVM---GAARAGGGEFPERVGQPVCQYYMRTGTCKYGASCKYHHPRRGAWFLLAM 664 G G G A PERP E DC++Y+RTG C +G RCR+NHPRDRG GA A ++PER GQP+C+YYM+TGTCK+G +CKYHHP++ L M Sbjct: 45 GGGGDGDAAGRLPERPGEEDCVYYLRTGACGFGDRCRYNHPRDRGGTEFGGGARNAAALDYPERAGQPICEYYMKTGTCKFGTNCKYHHPKQDGAVLPVM 144 HSP 2 Score: 82.4185 bits (202), Expect = 3.695e-15 Identity = 38/113 (33.63%), Postives = 55/113 (48.67%), Query Frame = 2 Query: 296 MERHGRVSEGSQSDPSPEWTAPGTETGPEGLGVGAESYPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQYYMRTGTCKYGASCKYHHP 634 M HG S + P + + TG +PERP + DC +Y+RTG C +G+ C+++HPR+ + P R G C YY + G C+YG +CKY HP Sbjct: 270 MGHHGSSSTIAYGGP---YVPYASSTGQSSNNQQEHGFPERPGQPDCQYYMRTGDCKFGATCKYHHPRELSAPKSGYMVNSLCLPLRPGAQPCAYYAQNGYCRYGVACKYDHP 379
BLAST of DY304736 vs. ExPASy Swiss-Prot
Match: C3H63_ORYSJ (Zinc finger CCCH domain-containing protein 63 OS=Oryza sativa subsp. japonica GN=Os11g0472000 PE=2 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 1.889e-27 Identity = 59/125 (47.20%), Postives = 74/125 (59.20%), Query Frame = 2 Query: 308 GRVSEGSQSDPSPEWTAPGTETGPE------------GLGVGAESYPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQYYMRTGTCKYGASCKYHHPRRGA 646 G V EGS S + A GP G + A YPER E DC +Y+RTG C +G C+FNHP DR + AAR G E+P+R+GQP CQYY++TGTCK+GA+CK+HHPR A Sbjct: 8 GGVGEGSSSSAAAAAAAAAATIGPHVVDEEAMWQMNLGEAMEAGPYPERIGEPDCSYYMRTGLCRFGMTCKFNHPADRKMAVAAARMKG-EYPQRIGQPECQYYLKTGTCKFGATCKFHHPREKA 131 HSP 2 Score: 81.6481 bits (200), Expect = 6.303e-15 Identity = 33/85 (38.82%), Postives = 51/85 (60.00%), Query Frame = 2 Query: 407 YPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQYYMRTGTCKYGASCKYHHPRRGAWFLLA 661 +PERPD+ +C Y++TG C +G+ C+F+HP++R P R G+P+C +Y R G CK+G +CK+ HP + LA Sbjct: 306 FPERPDQPECQFYMKTGDCKFGAVCKFHHPKERIIPTPNCALSSLGLPLRPGEPICTFYSRYGICKFGPNCKFDHPMGTVMYGLA 390
BLAST of DY304736 vs. ExPASy Swiss-Prot
Match: C3H5_ORYSJ (Zinc finger CCCH domain-containing protein 5 OS=Oryza sativa subsp. japonica GN=Os01g0257400 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.889e-27 Identity = 55/97 (56.70%), Postives = 67/97 (69.07%), Query Frame = 2 Query: 374 GPEGLGVGAESYPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGG------EFPERVGQPVCQYYMRTGTCKYGASCKYHHPRRGA 646 G G V A PERP EADC++Y+RTG C YG CR+NHPRDR + A GGG E+PER GQPVC+YYM+ GTCK+G++CKY HPR G+ Sbjct: 37 GGGGEAVAAGRLPERPGEADCVYYLRTGACGYGENCRYNHPRDRAAA--AVLNGGGKTTHSAEYPERPGQPVCEYYMKNGTCKFGSNCKYDHPREGS 131 HSP 2 Score: 75.0998 bits (183), Expect = 5.900e-13 Identity = 35/107 (32.71%), Postives = 55/107 (51.40%), Query Frame = 2 Query: 314 VSEGSQSDPSPEWTAPGTETGPEGLGVGAESYPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQYYMRTGTCKYGASCKYHHP 634 V+ GSQ P T P + + E ++P RP + +C +Y++TG C +GS C+++HP+ + P R G C YY + G CK+G +CK+ HP Sbjct: 271 VTYGSQYAPLSSSTMPSSSSKQE------PAFPARPGQPECQYYLKTGSCKFGSACKYHHPQYLNTPKSNCMLSPLGLPLRPGSQPCAYYTQHGFCKFGPTCKFDHP 371
BLAST of DY304736 vs. ExPASy Swiss-Prot
Match: C3H57_ARATH (Zinc finger CCCH domain-containing protein 57 OS=Arabidopsis thaliana GN=ZFN3 PE=2 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 1.599e-26 Identity = 49/81 (60.49%), Postives = 62/81 (76.54%), Query Frame = 2 Query: 404 SYPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQYYMRTGTCKYGASCKYHHPRRGA 646 SYPER E DC +Y+RTG C +GS CRFNHP DR V+ AR G E+PER+GQP C++Y++TGTCK+G +CK+HHPR A Sbjct: 38 SYPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVIATARIKG-EYPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKA 117 HSP 2 Score: 83.9593 bits (206), Expect = 1.270e-15 Identity = 34/78 (43.59%), Postives = 49/78 (62.82%), Query Frame = 2 Query: 407 YPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQYYMRTGTCKYGASCKYHHPRR 640 +PERP + +C Y++TG C +G+ C+F+HPRDR + P R G+P+C +Y R G CK+G SCK+ HP R Sbjct: 240 FPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQTPPPDCVLSSVGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPMR 317
BLAST of DY304736 vs. ExPASy Swiss-Prot
Match: C3H12_ORYSJ (Zinc finger CCCH domain-containing protein 12 OS=Oryza sativa subsp. japonica GN=Os01g0917400 PE=2 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 7.937e-26 Identity = 48/80 (60.00%), Postives = 61/80 (76.25%), Query Frame = 2 Query: 407 YPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQYYMRTGTCKYGASCKYHHPRRGA 646 YPER E DC +Y+RTG C +G CRFNHP+DR + +AR G E+PER+GQP CQYY++TGTCK+G +CK+HHPR A Sbjct: 77 YPERSGEPDCTYYLRTGLCRFGMSCRFNHPQDRNLAIASARMKG-EYPERMGQPECQYYLKTGTCKFGPTCKFHHPREKA 155 HSP 2 Score: 81.2629 bits (199), Expect = 8.233e-15 Identity = 32/76 (42.11%), Postives = 49/76 (64.47%), Query Frame = 2 Query: 407 YPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQYYMRTGTCKYGASCKYHHP 634 +PERPD+ +C +Y++TG C +G+ C+F+HPR R P R G+ +C++Y R G CK+GA+CK+ HP Sbjct: 329 FPERPDQPECQYYMKTGDCKFGAVCKFHHPRVRSMPTPDCVLSPVGLPLRPGEELCKFYSRYGICKFGANCKFDHP 404
BLAST of DY304736 vs. ExPASy Swiss-Prot
Match: C3H66_ORYSJ (Zinc finger CCCH domain-containing protein 66 OS=Oryza sativa subsp. japonica GN=Os12g0405100 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.354e-25 Identity = 65/150 (43.33%), Postives = 84/150 (56.00%), Query Frame = 2 Query: 323 GSQSDPSPEWTAPGTET------GPEGLGV-------------GAES-----YPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQYYMRTGTCKYGASCKYHHPRRGAWFLLAMCH*IIMVYPLPP 700 G + D + T+PG + GP LGV G ES YPER E DC +Y+RTG C +G C+FNHP +R + AAR G E+P RVGQP CQYY++TGTCK+GA+CK+HHPR A L ++ YP+ P Sbjct: 11 GGEGDSNGGGTSPGGVSAAAPAIGPHHLGVAAAEEAMWQMTLGGGESMESTPYPERIGEPDCSYYMRTGLCRFGMTCKFNHPPNRKLAVAAARMNG-EYPYRVGQPECQYYLKTGTCKFGATCKFHHPREKA-ALANRVQLNVLGYPMRP 158 HSP 2 Score: 82.8037 bits (203), Expect = 2.830e-15 Identity = 33/80 (41.25%), Postives = 49/80 (61.25%), Query Frame = 2 Query: 395 GAESYPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQYYMRTGTCKYGASCKYHHP 634 G +PERPD+ +C Y++TG C +G+ C+F+HP++R P R G+PVC +Y R G CK+G +CK+ HP Sbjct: 311 GENIFPERPDQPECQFYMKTGDCKFGAVCKFHHPKERLVPAPNCALNSLGLPLRPGEPVCTFYSRYGICKFGPNCKFDHP 390 The following BLAST results are available for this feature:
BLAST of DY304736 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >DY304736 ID=DY304736; Name=DY304736; organism=Citrus clementina; type=EST; length=880bpback to top |