DY304776
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY304776 vs. ExPASy Swiss-Prot
Match: RTNLP_ARATH (Reticulon-like protein B16 OS=Arabidopsis thaliana GN=RTNLB16 PE=2 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 1.009e-58 Identity = 115/203 (56.65%), Postives = 151/203 (74.38%), Query Frame = 3 Query: 150 FKLLNRHGTVHQFMGGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMXXXXXXXXXXXKQXXXXXXXXXXXXMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRNCGDDP*EYNPPTTKVVDENVISQIPGTLSRDK 758 ++LL R TVHQFMGGG+ AD+LLW+RR +S GVI+++TVAWLIFE SGLPFLSV SDVLL++I++ +Q MVN+AAASFR+K+N+LL+MAHD+TVG DFRLFF+VV LWLLSAIGSY S TL YIGT+LS+T+PALYS+++++VD+ CG + K+VDENVIS++ +LS+DK Sbjct: 23 YRLLGRQITVHQFMGGGKAADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNRQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKVVICLWLLSAIGSYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLS-HHYKIVDENVISRLSWSLSKDK 224
BLAST of DY304776 vs. ExPASy Swiss-Prot
Match: RTNLL_ARATH (Reticulon-like protein B12 OS=Arabidopsis thaliana GN=RTNLB12 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 4.277e-25 Identity = 57/164 (34.76%), Postives = 89/164 (54.27%), Query Frame = 3 Query: 153 KLLNRHGTVHQFMGGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMXXXXXXXXXXXKQXXXXXXXXXXXXMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFE 644 KL NR T+H+ +GGG ADV+LW+++ VS G++ V +W++FE ++ S VLLLL+ ++ + M A+ R+ +N LL ++HDI + +D L+ +V L+LLS IGS F TL + L+ +TVPA Y R+E Sbjct: 7 KLFNRDRTIHEILGGGIVADVMLWRKKNVSVGIVTVTIASWMVFEAFAYTIFTLISSVLLLLLSILFLWSKSASILNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDIAMARDSELYTKVAVSLFLLSLIGSLMDFQTLCHTSVLVVMTVPAFYERYE 170
BLAST of DY304776 vs. ExPASy Swiss-Prot
Match: RTNLC_ARATH (Reticulon-like protein B3 OS=Arabidopsis thaliana GN=RTNLB3 PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.729e-24 Identity = 55/169 (32.54%), Postives = 91/169 (53.85%), Query Frame = 3 Query: 150 FKLLNRHGTVHQFMGGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMXXXXXXXXXXXKQXXXXXXXXXXXXMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVD 656 ++L R +H+ GGG+ AD+ LW+ ++VS GV+ ATV+W++FE L++ + +L + ++ K +V A+ R++IN + DI G+D + F V+A LW+LS +GS +F TL YI T+L T+P LY ++E +VD Sbjct: 46 YRLFGREQPLHKLFGGGKPADIFLWRNKKVSGGVLGAATVSWILFELLEYNLLTLFGHISILALAVLFLWSSASTFIHKSPLHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDLKKFLLVIAGLWVLSKVGSSCNFLTLIYIATVLLFTIPVLYEKYEDKVD 214
BLAST of DY304776 vs. ExPASy Swiss-Prot
Match: RTNLB_ARATH (Reticulon-like protein B2 OS=Arabidopsis thaliana GN=RTNLB2 PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.376e-23 Identity = 62/203 (30.54%), Postives = 103/203 (50.74%), Query Frame = 3 Query: 150 FKLLNRHGTVHQFMGGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMXXXXXXXXXXXKQXXXXXXXXXXXXMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRNCGDDP*EYNPPTTKVVDENVISQIPGTLSRDK 758 ++L R VH+ +GGG+ AD+ +WK +++S GV ATVAW++FE L++ V+++ + ++ K + A+ R++IN + +I G+D + F +A LW+LS +G +SF TLAYI +L TVP Y ++E +VD + G+ V+D V S+IP +DK Sbjct: 67 YRLFGRERPVHKVLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIVALAVLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFLSAIAGLWVLSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVD-SYGEKAMAELKKQYAVLDAKVFSKIPRGPLKDK 268
BLAST of DY304776 vs. ExPASy Swiss-Prot
Match: RTNLA_ARATH (Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.376e-23 Identity = 63/204 (30.88%), Postives = 104/204 (50.98%), Query Frame = 3 Query: 150 FKLLNRHGTVHQFMGGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMXXXXXXXXXXXKQXXXXXXXXXXXXMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRNCGDDP*EYNPPTTKVVDENVISQIP-GTLSRDK 758 ++L R VH+ +GGG+ AD+ +WK +++S GV+ AT AW++FE L++ V+++++ ++ K + A+ R++IN +I G+D + F +A LW+LS +G F+F TLAYI +L TVP Y ++E +VD G+ V+DE V+S+IP G L K Sbjct: 71 YRLFGREQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMIVVLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFLIAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVD-PLGEKAMIELKKQYAVLDEKVLSKIPLGPLKNKK 273
BLAST of DY304776 vs. ExPASy Swiss-Prot
Match: RTNLK_ARATH (Reticulon-like protein B11 OS=Arabidopsis thaliana GN=RTNLB11 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.521e-22 Identity = 61/195 (31.28%), Postives = 99/195 (50.77%), Query Frame = 3 Query: 174 TVHQFMGGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMXXXXXXXXXXXKQXXXXXXXXXXXXMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRNCGDDP*EYNPPTTKVVDENVISQIPGTLSRDK 758 +VHQ +G G AD+LLW+ R + +++ +T W +FER+G LS S+VLLLL+ + + N AA RV INY+L +A DIT+ ++ QV LW +S +G+ + TL YIG LLS++ P +Y +++ +D T+K V N+ + P ++++K Sbjct: 12 SVHQSLGAGSVADLLLWRNRTGAVILLISSTGFWFLFERAGYNLLSFVSNVLLLLVAIFFLWAKSATVLNRPLPPVPNMEIPEEFANKAADDLRVWINYVLSIASDITIARNPIRLLQVSLVLWAISYVGTLINSLTLVYIGVLLSLSFPIVYEKYQDHIDEKVNS--------TSKFV-RNISRKFPLPINKEK 197
BLAST of DY304776 vs. ExPASy Swiss-Prot
Match: RTNLD_ARATH (Reticulon-like protein B4 OS=Arabidopsis thaliana GN=RTNLB4 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 3.389e-22 Identity = 64/208 (30.77%), Postives = 102/208 (49.04%), Query Frame = 3 Query: 150 FKLLNRHGTVHQFMGGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMXXXXXXXXXXXKQXXXXXXXXXXXXMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRNCGDDP*EYNPPTTKVVDE----NVISQIP-GTLSRDK 758 ++L R VH+ +GGG+ AD+ LW+ ++VS GV+ T +W++FE L+ + + + K + + R++IN L + +I GKD + F V+A LW+LS IGS ++F TL Y T+L T+P LY ++E +VD G+ V+DE VIS+IP G L++ K Sbjct: 50 YRLFGREKPVHKVLGGGKPADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAIFALAALFLWSNACTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVKKFILVIAGLWVLSIIGSCYNFLTLFYTATVLLFTIPVLYEKYEDKVDA-YGEKAMREIKKQYAVLDEKVLRKVISKIPRGALNKKK 256
BLAST of DY304776 vs. ExPASy Swiss-Prot
Match: RTNLE_ARATH (Reticulon-like protein B5 OS=Arabidopsis thaliana GN=RTNLB5 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.090e-20 Identity = 59/196 (30.10%), Postives = 97/196 (49.49%), Query Frame = 3 Query: 150 FKLLNRHGTVHQFMGGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMXXXXXXXXXXXKQXXXXXXXXXXXXMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRNCGDDP*EYNPPTTKVVDENVISQIP 737 +++ R VH+ +GGG+ ADV LW+ +++S V+ VAT W++FE LS+ + +L + + K A+S R ++N ++ I +G+D + F VV LW++S +G++F+F TL YI ++ TVP LY + E +VD E V DE V+S+IP Sbjct: 50 YRMFGREKPVHKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVGLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYV-VFDEKVLSKIP 244
BLAST of DY304776 vs. ExPASy Swiss-Prot
Match: RTNLF_ARATH (Reticulon-like protein B6 OS=Arabidopsis thaliana GN=RTNLB6 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.860e-20 Identity = 57/196 (29.08%), Postives = 97/196 (49.49%), Query Frame = 3 Query: 150 FKLLNRHGTVHQFMGGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMXXXXXXXXXXXKQXXXXXXXXXXXXMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRNCGDDP*EYNPPTTKVVDENVISQIP 737 ++L R VH+ +GGG ADV LW+ +++S V+ VAT W++FE FLS+ +L+ + + K ++ R ++N ++ I +G+D + F VV LW++S +G++F+F TL YI ++ TVP LY + E +VD + + V DE V+S++P Sbjct: 50 YRLFGREKPVHKVLGGGLPADVFLWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALAALFLLSNAHAFMNKTPPKIPEIHIKEEHFLMIVSALRNELNQAFVILRSIALGRDLKKFLMVVFGLWIISVVGNWFNFLTLVYICFVVLHTVPMLYEKHEDKVD-PVAEKTLKELKKHYMVFDEKVLSKLP 244
BLAST of DY304776 vs. ExPASy Swiss-Prot
Match: RTNLN_ARATH (Reticulon-like protein B14 OS=Arabidopsis thaliana GN=RTNLB14 PE=2 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 5.982e-19 Identity = 53/161 (32.92%), Postives = 84/161 (52.17%), Query Frame = 3 Query: 165 RHGTVHQFMGGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMXXXXXXXXXXXKQXXXXXXXXXXXXMVNNAAASFRV-KINYLLLMAHDITVGKDFRLFFQVVAYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFE 644 R +++ +GGGR AD++ WK ++ S ++ V T+ W +FE PF++ +LLL I + Q ++ + F KIN+ ++ +DI+ GKDFRL F V LW+LS +G+YFS TL YI + T+P LY ++E Sbjct: 18 RRRSLYHNLGGGRFADIMFWKNKKESGTILGVFTLIWFLFEVVEYPFITFLCQILLLFIFIFLIWSYIGS---SQLIQSKPPSINDLRISESNWRFLFNKINWFIIKLYDISSGKDFRLLFLAVVSLWILSVVGNYFSSLTLLYIVFVGLETIPMLYEQYE 175 The following BLAST results are available for this feature:
BLAST of DY304776 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >DY304776 ID=DY304776; Name=DY304776; organism=Citrus clementina; type=EST; length=932bpback to top |