DY304781
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY304781 vs. ExPASy Swiss-Prot
Match: RABEP_DROME (Rab proteins geranylgeranyltransferase component A OS=Drosophila melanogaster GN=Rep PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.685e-21 Identity = 63/166 (37.95%), Postives = 92/166 (55.42%), Query Frame = 1 Query: 241 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLY--------SDVEISNYASRLLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCTVPDSRAAIFKDKNLGLMEKNQLMK 714 FDL+VIGTG ES I+AA S GKSVLHLD N +YG +SS S+ L L+ P S + Y S+ + ++ + R F+LD+ PR+L+ A V L++KS Y EF+++D M + ++ +VP SR+ +F K L ++EK LMK Sbjct: 9 FDLVVIGTGFTESCIAAAGSRIGKSVLHLDSNEYYGDVWSSFSMDALCARLDQEVEPHSALRNARYTWHSMEKESETDAQSWNRDSVLAKSRRFSLDLC-PRILYAAGELVQLLIKSNICRYAEFRAVDHVCMRH-NGEIVSVPCSRSDVFNTKTLTIVEKRLLMK 172
BLAST of DY304781 vs. ExPASy Swiss-Prot
Match: RAEP_YEAST (Rab proteins geranylgeranyltransferase component A OS=Saccharomyces cerevisiae GN=MRS6 PE=1 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 3.143e-17 Identity = 56/167 (33.53%), Postives = 94/167 (56.29%), Query Frame = 1 Query: 244 DLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLLSQ---HPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSID--ATFMLDADAKLCTVPDSRAAIFKDKNLGLMEKNQLMKIFKLV 729 D+++ GTG+ ESV++AA + G +VLH+D N +YG ++L++ + ++N + S C Y + ++ Y S L+ R+F +D+S P++LF + +++KS YLEF+S+ T+ D KL +++ IF D+NL LM K LMK K V Sbjct: 48 DVLIAGTGMVESVLAAALAWQGSNVLHIDKNDYYGDTSATLTVDQIKRWVNEVNEGSVSC----YKNAKL--YVSTLIGSGKYSSRDFGIDLS-PKILFAKSDLLSILIKSRVHQYLEFQSLSNFHTYENDCFEKL---TNTKQEIFTDQNLPLMTKRNLMKFIKFV 204
BLAST of DY304781 vs. ExPASy Swiss-Prot
Match: RAEP_CANAL (Rab proteins geranylgeranyltransferase component A OS=Candida albicans GN=MRS6 PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.011e-15 Identity = 52/164 (31.71%), Postives = 90/164 (54.88%), Query Frame = 1 Query: 244 DLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLLSQH-PRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCTV-PDSRAAIFKDKNLGLMEKNQLMKIFKLV 729 D+++IGTGL ES+++AA S G VLH+D N +YG S+L+I L + ++ + D +I + +Q+ +++ +D++ P+++FC + L++KS YLEF+S+ + + D V ++ IF DK+L LM K LMK K + Sbjct: 5 DVLIIGTGLQESILAAALSWQGTQVLHIDSNTYYGDSCSTLTIEQLKKWCGDVNSGKI----HQFQDAQIYIPGGKQSNQYTSKDYGIDLT-PKIMFCQSDLLSLLIKSRVYRYLEFQSLSNFHVFENDDFQQKVNATTKQDIFTDKSLSLMTKRYLMKFLKFL 163
BLAST of DY304781 vs. ExPASy Swiss-Prot
Match: YG63_SCHPO (Uncharacterized Rab geranylgeranyltransferase C15C4.03 OS=Schizosaccharomyces pombe GN=SPBC15C4.03 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.696e-13 Identity = 51/170 (30.00%), Postives = 86/170 (50.59%), Query Frame = 1 Query: 238 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLN--SHSTPSSVCPDPLYSDVEISNYASRLLSQH--PRNFNLDVS-GPRVLFCADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCTVPDSRAAIFKDKNLGLMEKNQLMKIFKLVS 732 ++D+I++GT L S++SAA S + + VLH+D N FYG SL++ DL S + D + + + L++ P+N + P+ +F + V L+ ++ YL K + +L ++ + VP+SRA IF +KNL L K +M+ K VS Sbjct: 6 SYDVIIVGTNLRNSILSAALSWANQRVLHIDENSFYGEIDGSLTLRDLEQINEKIKKVDSSQILNDNGSHKSPLKRFEVQFLNKDLIPKNKGSVIQFHPQEIFASSELVKLLSETKIYKYLLLKPARSFRLLTSNEEWIKVPESRADIFNNKNLSLASKRIVMRFMKFVS 175
BLAST of DY304781 vs. ExPASy Swiss-Prot
Match: GDIB_PONAB (Rab GDP dissociation inhibitor beta OS=Pongo abelii GN=GDI2 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.044e-12 Identity = 49/164 (29.88%), Postives = 78/164 (47.56%), Query Frame = 1 Query: 241 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCTVPDSRAAIFKDKNLGLMEKNQLMKIFKLVS 732 +D+IV+GTGL E ++S S +GK VLH+D NP+YG S SI L + P S P+ + R++N+D+ P+ L V ++L + + YL+FK + +F+ K+ VP + A +GL EK + K V+ Sbjct: 5 YDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGG--ESASITPLEDLYKRYKIPGSP-PESM---------------GRGRDWNVDLI-PKFLMANGQLVKMLLYTEVTRYLDFKVTEGSFVYKG-GKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVA 148
BLAST of DY304781 vs. ExPASy Swiss-Prot
Match: GDIB_RAT (Rab GDP dissociation inhibitor beta OS=Rattus norvegicus GN=Gdi2 PE=1 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 5.192e-12 Identity = 47/164 (28.66%), Postives = 81/164 (49.39%), Query Frame = 1 Query: 241 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCTVPDSRAAIFKDKNLGLMEKNQLMKIFKLVS 732 +D+IV+GTGL E ++S S +GK VLH+D NP+YG +S+ TP + LY ++ + + R++N+D+ P+ L V ++L + + Y++FK I+ +F+ K+ VP + A +GL EK + K V+ Sbjct: 5 YDVIVLGTGLTECILSGIMSVNGKKVLHMDQNPYYGGESASI-------------TPL----EDLYKRFKLPGQPPASMGR-GRDWNVDLI-PKFLMANGQLVKMLLFTEVTRYMDFKVIEGSFVYKG-GKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVA 148
BLAST of DY304781 vs. ExPASy Swiss-Prot
Match: GDIB_MOUSE (Rab GDP dissociation inhibitor beta OS=Mus musculus GN=Gdi2 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.192e-12 Identity = 47/164 (28.66%), Postives = 81/164 (49.39%), Query Frame = 1 Query: 241 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCTVPDSRAAIFKDKNLGLMEKNQLMKIFKLVS 732 +D+IV+GTGL E ++S S +GK VLH+D NP+YG +S+ TP + LY ++ + + R++N+D+ P+ L V ++L + + Y++FK I+ +F+ K+ VP + A +GL EK + K V+ Sbjct: 5 YDVIVLGTGLTECILSGIMSVNGKKVLHMDQNPYYGGESASI-------------TPL----EDLYKRFKLPGQPPASMGR-GRDWNVDLI-PKFLMANGQLVKMLLFTEVTRYMDFKVIEGSFVYKG-GKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVA 148
BLAST of DY304781 vs. ExPASy Swiss-Prot
Match: GDIA_MOUSE (Rab GDP dissociation inhibitor alpha OS=Mus musculus GN=Gdi1 PE=1 SV=3) HSP 1 Score: 72.0182 bits (175), Expect = 5.192e-12 Identity = 47/164 (28.66%), Postives = 80/164 (48.78%), Query Frame = 1 Query: 241 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCTVPDSRAAIFKDKNLGLMEKNQLMKIFKLVS 732 +D+IV+GTGL E ++S S +GK VLH+D NP+YG SS+ TP + LY +I + + R++N+D+ P+ L V ++L + + YL+FK ++ +F+ K+ VP + +G+ EK + K V+ Sbjct: 5 YDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSI-------------TPL----EELYKRFQILEGPPESMGR-GRDWNVDLI-PKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKG-GKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVA 148
BLAST of DY304781 vs. ExPASy Swiss-Prot
Match: GDIB_HUMAN (Rab GDP dissociation inhibitor beta OS=Homo sapiens GN=GDI2 PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 6.781e-12 Identity = 49/164 (29.88%), Postives = 77/164 (46.95%), Query Frame = 1 Query: 241 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCTVPDSRAAIFKDKNLGLMEKNQLMKIFKLVS 732 +D+IV+GTGL E ++S S +GK VLH+D NP+YG S SI L P S P+ + R++N+D+ P+ L V ++L + + YL+FK + +F+ K+ VP + A +GL EK + K V+ Sbjct: 5 YDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGG--ESASITPLEDLYKRFKIPGSP-PESM---------------GRGRDWNVDLI-PKFLMANGQLVKMLLYTEVTRYLDFKVTEGSFVYKG-GKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVA 148
BLAST of DY304781 vs. ExPASy Swiss-Prot
Match: GDIA_CANFA (Rab GDP dissociation inhibitor alpha OS=Canis familiaris GN=GDI1 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.781e-12 Identity = 46/164 (28.05%), Postives = 80/164 (48.78%), Query Frame = 1 Query: 241 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCTVPDSRAAIFKDKNLGLMEKNQLMKIFKLVS 732 +D+IV+GTGL E ++S S +GK VLH+D NP+YG SS+ TP + LY ++ + + R++N+D+ P+ L V ++L + + YL+FK ++ +F+ K+ VP + +G+ EK + K V+ Sbjct: 5 YDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSI-------------TPL----EELYKRFQLLEGPPEAMGR-GRDWNVDLI-PKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFIYKG-GKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVA 148 The following BLAST results are available for this feature:
BLAST of DY304781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >DY304781 ID=DY304781; Name=DY304781; organism=Citrus clementina; type=EST; length=901bpback to top |