DY304783

Overview
NameDY304783
Unique NameDY304783
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1028
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY304783 vs. ExPASy Swiss-Prot
Match: GYAR_THELI (Glyoxylate reductase OS=Thermococcus litoralis GN=gyaR PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.488e-21
Identity = 79/272 (29.04%), Postives = 126/272 (46.32%), Query Frame = 3
Query:  153 SGFAMLGEQFFTSNKFRYLKAYESALPLHEFLTLHAHSVKAIFSSACAPVTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLWPINAE-----FPLGSKLGGKRVGIVGLGSIGSEVAKRLEAFGCCVSYDSRNKKPSVTYPF---YPDVCELAPKSDVLLSCCALTDQTHHLIK*AGPVGPGEKR--------SIISVGLAAIINEKEMVGCLLPGKIGRAGIGLVRKIP 920
            +G  M+ E+F+    ++  KA     P    L      V A+ +     V  E+L   P+++++   + G ++ID+ E  +RG+ + N   V ++  AD A  LL+ V R++  AD FVR G W  +         LG  L GK +GIVG G IG  +AKR + FG  + Y SR +KP         Y D   L  +SD +     LT +T+H+I        GEK          +I+    A+++   ++  L  G I  AG+ +  + P
Sbjct:   14 NGIKMI-EKFYEIELWKDPKA-----PPRGVLLEKVREVDALVTLVTDKVDKELLENAPKLKIIAQYAVGYDNIDIEEATKRGIYVTNTPGVLTDATADLAFALLLAVARRIVEADAFVRSGEWKKSEVGWHPLMFLGYGLKGKTLGIVGFGRIGQALAKRAKGFGMKIIYYSRTRKPEAEEEIGAEYVDFETLLKESDFISLHVPLTKETYHMI--------GEKELKLMKPNAILINTSRGAVVDTNALIKALKEGWIAGAGLDVFEEEP 271          
BLAST of DY304783 vs. ExPASy Swiss-Prot
Match: GYAR_THEPD (Glyoxylate reductase OS=Thermofilum pendens (strain Hrk 5) GN=gyaR PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.944e-21
Identity = 66/236 (27.97%), Postives = 115/236 (48.73%), Query Frame = 3
Query:  231 PLHEFLTLHAHSVKAIFSSACAPVTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLW--PINAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLEAFGCCVSYDSRNKKPSVTYPF----YPDVCELAPKSDVLLSCCALTDQTHHLIK*AGPVGPGEKRSIISVGLAAIINEKEMVGCLLPGKIGRAGIGLVRKIP 920
            P  E L  +     A+       + AE++   P ++++   S G +HID+ E  +RG+ + +   V ++ VA++ +GL++ V R++  AD  +R G W  P N  F  G +L GK +G+VGLG IG   AKRL +F   + Y    ++  V        + D+  L  KSD++     LT +T+HLI         +   +I+     +++ + +V  L  G I  A + +  + P
Sbjct:   36 PSREELLRNIRDKDALLCLLTDKIDAEVMDAAPNLKVISTYSVGFDHIDIPEATKRGIYVTHTPGVLTDAVAEFTVGLILAVTRRIVEADKIIRTGQWDKPWNPYFLTGPELKGKTIGLVGLGRIGVATAKRLSSFDVKILYYDIERRWDVETVIPNMEFTDLDTLLEKSDIVSIHVPLTKETYHLINEERLRKMKKTAYLINTARGPVVDTEALVKALKEGWIAGAALDVFEQEP 271          
BLAST of DY304783 vs. ExPASy Swiss-Prot
Match: GYAR_THEON (Glyoxylate reductase OS=Thermococcus onnurineus (strain NA1) GN=gyaR PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 4.330e-21
Identity = 78/275 (28.36%), Postives = 131/275 (47.64%), Query Frame = 3
Query:  129 QVLLLRK--PSGFAMLGEQFFTSNKFRYLKAYESALPL-HEFLTLHAHSVKAIFSSACAPVTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLWPIN--AEFP---LGSKLGGKRVGIVGLGSIGSEVAKRLEAFGCCVSYDSRNKKPSVTYPF---YPDVCELAPKSDVLLSCCALTDQTHHLIK*AGPVGPGEKRSIISVGLAAIINEKEMVGCLLPGKIGRAGIGLVRKIP 920
            +VL+ RK   +G  ML E F        ++ +E    +  E L      V A+ +     + AE+    P +++V   + G ++ID+ E  + GV + N  +V +   AD A  LL+   R+L  AD FVR G W     A  P   LG  + G+ +GIVG G IG  +A+R + FG  + Y+SR +KP V       +  + EL  +SD ++    LT +T+H+I             ++++    +++ + +V  L  G I  AG+ +  + P
Sbjct:    4 KVLITRKIPENGIKMLREHF-------EVEVWEDEHEISREVLLEKVRDVDALVTMLSERIDAEVFDAAPRLKIVANYAVGYDNIDIEEATKMGVYITNTPDVLTNATADMAWVLLLATARRLIEADKFVRSGEWKKRGVAWHPLMFLGYDVYGRTIGIVGFGRIGQAIARRAKGFGMRILYNSRTRKPEVEKELGAEFMPLDELLKESDFVVLVVPLTKETYHMINEERLKLMKPTAILVNIARGKVVDTEALVKALREGWIAGAGLDVFEEEP 271          
BLAST of DY304783 vs. ExPASy Swiss-Prot
Match: GYAR_KORCO (Glyoxylate reductase OS=Korarchaeum cryptofilum (strain OPF8) GN=gyaR PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 5.655e-21
Identity = 66/250 (26.40%), Postives = 121/250 (48.40%), Query Frame = 3
Query:  219 ESALPLHEFLTLHAHSVKAIFSSACAPVTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLWPI--NAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLEAFGCCVSYDSRNKKPSVTYPF---YPDVCELAPKSDVLLSCCALTDQTHHLIK*AGPVGPGEKRSIISVGLAAIINEKEMVGCLLPGKIGRAGIGLVRKIPGSSGPAILPLK 953
            + A P  + +        A+ S    P+ AE+    P++R+V   + G ++IDV E  +RG+ + N   V +E  AD+A  LL+   R++  AD +VR+G W +  +    LG  + G+ +GIVG+G IG+ VA+R + FG  + Y    ++          Y  + +L  +SD +     LT++T+H+I             +++     ++++K +   L  G I  AG+ +  + P      +L L+
Sbjct:   30 DEAPPSKKVIIERVKDCDALVSLLTDPIDAEVFEAAPKLRIVAQYAVGYDNIDVKEATKRGIYVTNTPGVLTETTADFAFALLMAAARRVVEADRYVREGKWKVAWHPMMMLGYDVYGRTLGIVGMGRIGAAVARRAKGFGMRILYYDSIRREDFEKELGVEYVPLEKLLEESDFVSLHVPLTEETYHMIGEEQLRRMKRTAILVNTSRGKVVDQKALYKALKEGWIAGAGLDVFEQEPIPPDDPLLKLE 279          
BLAST of DY304783 vs. ExPASy Swiss-Prot
Match: GYAR_AERPE (Glyoxylate reductase OS=Aeropyrum pernix GN=gyaR PE=3 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 7.386e-21
Identity = 70/238 (29.41%), Postives = 118/238 (49.58%), Query Frame = 3
Query:  231 PLHEFLTLHAHSVKAIFSSACAPVTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLW-----PINAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLEAFGCCVSYDSRNKKPSVTYPF---YPDVCELAPKSDVLLSCCALTDQTHHLIK*AGPVGPGEKRSIISVGLAAIINEKEMVGCLLPGKIGRAGIGLVRKIP 920
            P +E L   A    A+++     +  ++L   P +R+V   + G ++IDV    R G+ + N   V +E  A++   L++   R++  AD FVR G W       +    LG +L GK +GI+G+G IGS VA+  +AFG  + Y SR++K  +       Y  + +L  +SD+L     LTD+T HLI  +      +   +++ G  AI++   +V  L  G I  A + +  + P
Sbjct:   35 PPYETLLSKAREADALYTLLTDRIDCDLLSQAPRLRIVAQMAVGFDNIDVECATRLGIYVTNTPGVLTEATAEFTWALILAAARRVVEADHFVRWGEWWRLRTGWHPMMMLGVELRGKTLGILGMGRIGSRVAEIGKAFGMRIIYHSRSRKREIEKELGAEYRSLEDLLRESDILSIHLPLTDETRHLIGESELKLMKKTAILVNTGRGAIVDTGALVKALREGWIAAAALDVFEEEP 272          
BLAST of DY304783 vs. ExPASy Swiss-Prot
Match: GYAR_THEGJ (Glyoxylate reductase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=gyaR PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 9.646e-21
Identity = 67/235 (28.51%), Postives = 112/235 (47.66%), Query Frame = 3
Query:  240 EFLTLHAHSVKAIFSSACAPVTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLWPIN--AEFP---LGSKLGGKRVGIVGLGSIGSEVAKRLEAFGCCVSYDSRNKKPSVTYPF---YPDVCELAPKSDVLLSCCALTDQTHHLIK*AGPVGPGEKRSIISVGLAAIINEKEMVGCLLPGKIGRAGIGLVRKIP 920
            E L      V A+ +     +  E+    P +R+V   + G +++DV E  RRG+ + N  +V +   AD+A  LL+   R+L  AD F R G W     A  P   LG  + GK +GI+G G IG  VA+R + FG  + Y SR +KP         +  + EL  +SD ++    LT +T+H+I             ++++    +++ + ++  L  G I  AG+ +  + P
Sbjct:   37 EVLLEKVRDVDALVTMLSERIDGEVFDNAPRLRIVANYAVGYDNVDVEEATRRGIYVTNTPDVLTNATADFAWTLLLATARRLIEADSFTRSGEWKRKGIAWHPLMFLGHDVYGKTIGIIGFGRIGQAVARRAKGFGMRILYYSRTRKPEAEEELKAEFKPLEELLKESDFVVLAVPLTKETYHMIGERELKLMKPTAILVNIARGKVVDTEALIKALKEGWIAGAGLDVFEEEP 271          
BLAST of DY304783 vs. ExPASy Swiss-Prot
Match: GYAR_PYRKO (Glyoxylate reductase OS=Pyrococcus kodakaraensis GN=gyaR PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.260e-20
Identity = 66/235 (28.09%), Postives = 114/235 (48.51%), Query Frame = 3
Query:  240 EFLTLHAHSVKAIFSSACAPVTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLW-----PINAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLEAFGCCVSYDSRNKKPSVTYPF---YPDVCELAPKSDVLLSCCALTDQTHHLIK*AGPVGPGEKRSIISVGLAAIINEKEMVGCLLPGKIGRAGIGLVRKIP 920
            E L      V A+ +     + +E+    P +R+V   + G ++IDV E  RRG+ + N  +V ++  AD+A  LL+   R+L  AD F R G W       +  + LG  + GK +GIVG G IG  VA+R   FG  + Y SR++KP         +  + +L  +SD ++    LT +T ++I         +   ++++    +++ K ++  L  G I  AG+ +  + P
Sbjct:   37 EVLLKKVRDVDALVTMLSERIDSEVFDAAPRLRIVANYAVGYDNIDVEEATRRGIYVTNTPDVLTDATADFAWTLLLATARRLIEADHFTRSGEWKRRGIAWHPRWFLGYDVYGKTIGIVGFGRIGQAVARRARGFGMRILYYSRSRKPEAEKELGAEFRSLEDLLRESDFVVLAVPLTKETQYMINEERLRLMKKTAILVNIARGKVVDTKALMKALKEGWIAGAGLDVYEEEP 271          
BLAST of DY304783 vs. ExPASy Swiss-Prot
Match: GYAR_PYRAB (Glyoxylate reductase OS=Pyrococcus abyssi GN=gyaR PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 2.149e-20
Identity = 67/235 (28.51%), Postives = 108/235 (45.96%), Query Frame = 3
Query:  240 EFLTLHAHSVKAIFSSACAPVTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLW-----PINAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLEAFGCCVSYDSRNKKPSVTYPF---YPDVCELAPKSDVLLSCCALTDQTHHLIK*AGPVGPGEKRSIISVGLAAIINEKEMVGCLLPGKIGRAGIGLVRKIP 920
            E L      V A+ +     +  E+    P +R+V   + G ++IDV E  +RG+ + N   V ++  AD A  LL+   R L   D F R G W       + ++ LG  + GK +GI+G G IG  +AKR   F   + Y SR +KP V       +  + EL  +SD ++    L  +T+H+I             +I+V    +I+ K ++  L  G I  AG+ +  + P
Sbjct:   38 EILLEKVKDVDALVTMLSERIDREVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEP 272          
BLAST of DY304783 vs. ExPASy Swiss-Prot
Match: YGDH_SCHPO (Putative 2-hydroxyacid dehydrogenase C1773.17c OS=Schizosaccharomyces pombe GN=SPBC1773.17c PE=2 SV=3)

HSP 1 Score: 98.9821 bits (245), Expect = 4.788e-20
Identity = 74/218 (33.94%), Postives = 107/218 (49.08%), Query Frame = 3
Query:  282 SSACAPVTAEILR-LLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLWPINAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLEAFGCCVSYDSRNK----KPSVTYPFYPDVCELAPKSDVLLSCCALTDQTHHLIK*AGPVGPGEKRSIISVGLAAIINEKEMVGCLLPGKIGRAGIGLVRKIP 920
            ++A +P T E+L  LLP  +L V  +AG N++DV    R GV +AN  N  +E  A+  L L +  LR    A+  +R G W  N    L     GKRVGI+G+G+IG   A+++   GC + Y +RN+    +       +    EL   SDV+   C LT  TH LI         +   II+    AIINE   +  +  GK+ RAG+ +    P
Sbjct:   66 NAAISPFTEEMLGPLLPTCKLFVTGAAGYNNVDVDWATRNGVYVANTPNGPTEGTANMNLMLFMCTLRGAREAEQSLRLGKWRQN--LSLTDDPYGKRVGIIGMGAIGKSFAQKILPLGCEIVYHNRNRLEAEEEKRLGASFVSFDELLSSSDVISINCPLTPATHDLISTKEFEKMKDGVYIINTARGAIINEDAFIKAIKSGKVARAGLDVFLNEP 281          
BLAST of DY304783 vs. ExPASy Swiss-Prot
Match: GYAR_PYRHO (Glyoxylate reductase OS=Pyrococcus horikoshii GN=gyaR PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 4.788e-20
Identity = 67/242 (27.69%), Postives = 116/242 (47.93%), Query Frame = 3
Query:  219 ESALPLHEFLTLHAHSVKAIFSSACAPVTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLW-----PINAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLEAFGCCVSYDSRNKKPSVTYPF---YPDVCELAPKSDVLLSCCALTDQTHHLIK*AGPVGPGEKRSIISVGLAAIINEKEMVGCLLPGKIGRAGIGLVRKIP 920
            E  +P  E L      V A+ +     +  E+    P++R+V   + G ++ID+ E  +RG+ + N  +V ++  AD A  LL+   R +   D FVR G W       + ++ LG  + GK +GI+GLG IG  +AKR + F   + Y SR +K  V       +  + +L  +SD ++    LT +T+HLI         +   +I++    +++   +V  L  G I  AG+ +  + P
Sbjct:   31 EKEIP-REILLKKVKEVDALVTMLSERIDKEVFENAPKLRIVANYAVGYDNIDIEEATKRGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKEEVERELNAEFKPLEDLLRESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDVFEEEP 271          
The following BLAST results are available for this feature:
BLAST of DY304783 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
GYAR_THELI1.488e-2129.04Glyoxylate reductase OS=Thermococcus litoralis GN=... [more]
GYAR_THEPD1.944e-2127.97Glyoxylate reductase OS=Thermofilum pendens (strai... [more]
GYAR_THEON4.330e-2128.36Glyoxylate reductase OS=Thermococcus onnurineus (s... [more]
GYAR_KORCO5.655e-2126.40Glyoxylate reductase OS=Korarchaeum cryptofilum (s... [more]
GYAR_AERPE7.386e-2129.41Glyoxylate reductase OS=Aeropyrum pernix GN=gyaR P... [more]
GYAR_THEGJ9.646e-2128.51Glyoxylate reductase OS=Thermococcus gammatolerans... [more]
GYAR_PYRKO1.260e-2028.09Glyoxylate reductase OS=Pyrococcus kodakaraensis G... [more]
GYAR_PYRAB2.149e-2028.51Glyoxylate reductase OS=Pyrococcus abyssi GN=gyaR ... [more]
YGDH_SCHPO4.788e-2033.94Putative 2-hydroxyacid dehydrogenase C1773.17c OS=... [more]
GYAR_PYRHO4.788e-2027.69Glyoxylate reductase OS=Pyrococcus horikoshii GN=g... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAQ9YL05RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304783 ID=DY304783; Name=DY304783; organism=Citrus clementina; type=EST; length=1028bp
GGGCAGGTGGTAGATGACTATAGACATGTGTGTAAAAAGAGCGCGGTGGC
AGCGGCCGGGATCTCGGGGGATACAAGAAGTTAACGCGACACAAGGCAAG
TGGCATCACTTCGCAATCCAATTCCCAGCAAGTGCTACTCTTAAGAAAAC
CATCAGGCTTCGCTATGTTAGGAGAACAGTTCTTTACCTCAAACAAATTC
CGATACTTGAAAGCATACGAATCAGCGCTTCCTCTACACGAATTCTTGAC
GCTACACGCGCACTCAGTGAAGGCCATCTTCTCCAGCGCATGTGCGCCGG
TTACAGCCGAAATCCTCCGCCTGCTTCCAGAGGTGCGGCTGGTGGTTGCC
ACAAGCGCCGGCCTTAACCATATTGACGTAGTAGAGTGCCGCCGCCGCGG
TGTGGCTCTGGCCAATGCTGGTAACGTTTTCTCTGAAGACGTGGCTGATT
ACGCGCTGGGCTTGCTAATTGATGTCCTGAGAAAACTTTCTGCTGCCGAT
TGCTTTGTCAGACAAGGGCTTTGGCCTATCAACGCTGAATTTCCGCTTGG
GTCTAAGTTGGGTGGCAAACGAGTTGGGATTGTTGGGCTGGGGAGCATTG
GGTCTGAAGTTGCCAAAAGGCTTGAAGCTTTCGGCTGCTGCGTTTCATAC
GACTCTAGGAATAAAAAGCCTTCTGTTACGTACCCTTTCTATCCGGATGT
CTGTGAACTTGCACCTAAGAGTGATGTCCTCCTCAGTTGCTGTGCATTGA
CTGATCAAACACATCACTTGATCAAATAAGCAGGTCCTGTTGGCCCTGGG
GAAAAAAGGAGTATTATTAGTGTAGGGCTTGCTGCCATTATTAATGAAAA
AGAAATGGTGGGGTGTTTGCTGCCAGGAAAAATTGGAAGGGCCGGGATCG
GACTTGTTCGAAAGATACCCGGAAGTTCCGGACCCGCCATTTTGCCTTTA
AAATGTTTTGCATGTACCCACAGGATGCCGACTTTTTCCCTCAAACCTTT
TAGGGAGGTGGAGTTAACTGTGGGGTTG
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