DY304791

Overview
NameDY304791
Unique NameDY304791
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length973
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY304791 vs. ExPASy Swiss-Prot
Match: EXTL3_HUMAN (Exostosin-like 3 OS=Homo sapiens GN=EXTL3 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.921e-12
Identity = 38/137 (27.74%), Postives = 64/137 (46.72%), Query Frame = -2
Query:   25 DQITVLMNGYSEDRIPLLQSIAATYTASPLVSSVLVLWGNPSTPTRTXXXXXXXXXXXXXXXXXXXLIRQPSSSLNARFLPRSSIRTHAVLICDDDVEMDQKSLEFAFRIWQSNANRLIGVFARSHDVDLVNKEWIY 435
            +Q TV+M  Y  + +  L +        P ++ V+V+W +P  P+                      +R   +SLN RFLP + I T A+L  DDD  +    + F FR+W+   +R++G   R H  D+ ++ W+Y
Sbjct:  661 EQFTVVMLTYEREEV--LMNSLERLNGLPYLNKVVVVWNSPKLPSEDLLWPDIGVPIMV--------VRTEKNSLNNRFLPWNEIETEAILSIDDDAHLRHDEIMFGFRVWREARDRIVGFPGRYHAWDIPHQSWLY 787          
BLAST of DY304791 vs. ExPASy Swiss-Prot
Match: EXT3_DROME (Exostosin-3 OS=Drosophila melanogaster GN=botv PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.770e-11
Identity = 43/139 (30.94%), Postives = 67/139 (48.20%), Query Frame = -2
Query:   25 DQITVLMNGYSEDRIPLLQSIAATYTASPLVSSVLVLWGNPSTPTRTXXXXXXXXXXXXXXXXXXXLIRQPSSSLNARFLPRSSIRTHAVLICDDDVEMDQKSLEFAFRIWQSNANRLIGVFARSHDVDL--VNKEWIY 435
            +Q T++M  Y  +++ L+ S+   Y   P +  V+V+W +P  P                      ++R P +SLN RFLP   I T AVL  DDD  +    + F FR+W+ + +R++G   R H  DL   N +W Y
Sbjct:  712 EQFTIVMLTYEREQV-LMDSLGRLY-GLPYLHKVVVVWNSPKPPL--------DDLRWPDIGVPVAVLRAPRNSLNNRFLPFDVIETEAVLSVDDDAHLRHDEILFGFRVWREHRDRVVGFPGRYHAWDLGNPNGQWHY 840          
BLAST of DY304791 vs. ExPASy Swiss-Prot
Match: EXTL3_MOUSE (Exostosin-like 3 OS=Mus musculus GN=Extl3 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.399e-11
Identity = 37/137 (27.01%), Postives = 63/137 (45.99%), Query Frame = -2
Query:   25 DQITVLMNGYSEDRIPLLQSIAATYTASPLVSSVLVLWGNPSTPTRTXXXXXXXXXXXXXXXXXXXLIRQPSSSLNARFLPRSSIRTHAVLICDDDVEMDQKSLEFAFRIWQSNANRLIGVFARSHDVDLVNKEWIY 435
            +Q TV+M  Y  + +  L +        P ++ V+V+W +P  P+                      +R   +SLN RFLP + I T A+L  DDD  +    + F F +W+   +R++G   R H  D+ ++ W+Y
Sbjct:  660 EQFTVVMLTYEREEV--LMNSLERLNGLPYLNKVVVVWNSPKLPSEDLLWPDIGVPIMV--------VRTEKNSLNNRFLPWNEIETEAILSIDDDAHLRHDEIMFGFWVWREARDRIVGFPGRYHAWDIPHQSWLY 786          
The following BLAST results are available for this feature:
BLAST of DY304791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
EXTL3_HUMAN9.921e-1227.74Exostosin-like 3 OS=Homo sapiens GN=EXTL3 PE=1 SV=... [more]
EXT3_DROME3.770e-1130.94Exostosin-3 OS=Drosophila melanogaster GN=botv PE=... [more]
EXTL3_MOUSE8.399e-1127.01Exostosin-like 3 OS=Mus musculus GN=Extl3 PE=2 SV=... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAQ9YL13RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304791 ID=DY304791; Name=DY304791; organism=Citrus clementina; type=EST; length=973bp
CGAGTACTTATCCGGATGCACCGTATAAATCCACTCTTTGTTTACCAAAT
CAACGTCGTGTGATCTGGCAAACACCCCAATCAAACGGTTGGCATTCGAT
TGCCAAATCCTGAAGGCGAATTCCAAGGATTTCTGATCCATCTCCACGTC
ATCGTCGCAGATTAAGACGGCGTGGGTCCGGATCGATGATCTGGGGAGGA
ATCTGGCGTTGAGGCTGCTGGATGGTTGGCGGATAAGGGAGATTGATGCG
GACCCGAAGGAGGAGAGTGAGAGATTGTGGGACAATTGGGAGAGGGTTCG
GGTTGGAGTAGAGGGGTTTCCCCAGAGGACCAACACAGAGGAGACCAGTG
GGGATGCCGTGTACGTTGCGGCGATTGATTGGAGAAGAGGGATCCGGTCC
TCTGAGTACCCGTTCATCAGCACCGTAATCTGGTCCCACCGAAGTGTCCG
CGGGTCCCGCTGATTTGTGGCGGCACAGGGGTCGGCGTCGGTCGTCACCG
TCCGGTAAGAGAACACTACTGACTCACGAGTTACGAGTAACAGGACTAAG
AGAAACGAAAGGGAAATTACCAGATTCATCGTTTTATCTTCGACGTGACG
CCGTCTATGATCTACTTAATTTTTTAAGTAGTTTTCATATGAAGCACATC
CAAATTCGAAACAAAAGAATCAATTCCTTATATGAATGTGATGGCATTGT
GTCATTTTGGTGCAGTTTAAGCTTTTCAGTTTTTATAGTGGTAGTTTAAT
AAAATTGGCACCAAAATGGGGGCGTAATTTTTGAGTTCTCCCTCATTAAT
TAACTCAATTGGTCCACCAAAAATACGGAAACCGAAAAGGCGACCCCCGA
AGCCCTTTTTTGTGGGTGAAAACCTTATTATGCGCACCCCCCCCCTACCC
GGTGGTTATCTTCTCTACCCAAAGGTGAAAATTATTTTTAAATAATGCCA
CTCACCTCCTACAAAATAACAAA
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