DY304796

Overview
NameDY304796
Unique NameDY304796
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length933
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY304796 vs. ExPASy Swiss-Prot
Match: Y5262_ARATH (Ankyrin repeat-containing protein At5g02620 OS=Arabidopsis thaliana GN=At5g02620 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.107e-22
Identity = 68/223 (30.49%), Postives = 104/223 (46.64%), Query Frame = 2
Query:    5 HVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITREXXXXXXXXXXXXXNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLK-LGVDVNAINRKGYTALDVVESDASNSGALQIVPALEEAGARRCDQLPPMSPHDIQPIGDTSPNQRTI 670
            H++A  G+L ++  L+EA  E ++  D +  T LH + S+GH EI                + G+T LH AA  G   I+ +++             G+T LH+ VK    E V  LME      L N  DN GNT LH+A       +V  +LK   V   A+N+ G TALD+ E     +G  +IVP L++ G +    + P     ++P G +   + T+
Sbjct:   96 HIAAKNGNLQVLDVLIEANPELSFTFDSSKTTALHTAASQGHGEIVCFLLDKGVDLAAIARSNGKTALHSAARNGHTVIVKKLIEKKAGMVTRVDKKGQTALHMAVKGQNTEIVDVLMEADG--SLINSADNKGNTPLHIAVRKNRAEIVQTVLKYCEVSRVAVNKSGETALDIAE----KTGLHEIVPLLQKIGMQNARSIKP--AEKVEPSGSSRKLKETV 310          

HSP 2 Score: 32.7278 bits (73), Expect = 1.107e-22
Identity = 18/34 (52.94%), Postives = 22/34 (64.71%), Query Frame = 3
Query:  753 ELPTEGLRNARKNHIIGAGLIATVTFAAGINPPG 854
            ++ TEGL NA  +  + A LIATV FAA  N PG
Sbjct:  340 KMHTEGLNNAINSTTLVAILIATVAFAAIFNVPG 373          
BLAST of DY304796 vs. ExPASy Swiss-Prot
Match: Y2168_ARATH (Ankyrin repeat-containing protein At2g01680 OS=Arabidopsis thaliana GN=At2g01680 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.685e-19
Identity = 63/197 (31.98%), Postives = 95/197 (48.22%), Query Frame = 2
Query:    5 HVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITREXXXXXXXXXXXXXNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKL-GVDVNAINRKGYTALDVVESDASNSGALQIVPALEEAGAR 592
            HV+A  GHL IVKELL    E     D +  +PL+ +  + HLEI                  G+T LH A   G + I+  ++  +     ++   G+T LH+ VK    E V+ +++      + N  D  GNT LH+AT      +   LL    ++VNAIN +  TA+D+ +    +  AL+I  AL EAGA+
Sbjct:   99 HVAAKRGHLGIVKELLRLWPELCRICDASNTSPLYAAAVQDHLEIVNAMLDVDPSCAMIVRKNGKTSLHTAGRYGLLRIVKALIEKDAAIVGVKDKKGQTALHMAVKGRSLEVVEEILQA--DYTILNERDRKGNTALHIATRKARPQITSLLLTFTAIEVNAINNQKETAMDLADKLQYSESALEINEALVEAGAK 293          
BLAST of DY304796 vs. ExPASy Swiss-Prot
Match: Y3236_ARATH (Ankyrin repeat-containing protein At3g12360 OS=Arabidopsis thaliana GN=At3g12360 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.599e-17
Identity = 61/203 (30.05%), Postives = 94/203 (46.31%), Query Frame = 2
Query:    2 LHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITREXXXXXXXXXXXXXNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKL-GVDVNAINRKGYTALDVVESDASNSGALQIVPALEEAGARRCDQL 607
            LH++A+ GH  IV+ LL+     +     +  TPL  +  +GH E+  +             +  +  LH AA +G + +I  +LS + Q A      G+T LH+ VK    E VK L++      +   PD   NT LH+AT  K   +V  LL L   + N + R   TALD+ E    +  +  I   L  +GA R ++L
Sbjct:  168 LHIAAIQGHHAIVEVLLDHDATLSQTFGPSNATPLVSAAMRGHTEVVNQLLSKAGNLLEISRSNNKNALHLAARQGHVEVIKALLSKDPQLARRIDKKGQTALHMAVKGQSSEVVKLLLDA--DPAIVMQPDKSCNTALHVATRKKRAEIVELLLSLPDTNANTLTRDHKTALDIAEGLPLSEESSYIKECLARSGALRANEL 368          
BLAST of DY304796 vs. ExPASy Swiss-Prot
Match: ANK2_MOUSE (Ankyrin-2 OS=Mus musculus GN=Ank2 PE=1 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 6.190e-16
Identity = 62/196 (31.63%), Postives = 93/196 (47.45%), Query Frame = 2
Query:    2 LHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITREXXXXXXXXXXXXXNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQIVPALEEAGA 589
            LHV+A  GH  + K LL+ R      + LNG TPLH++C K  +++  E               G TP+H AA  G +NI+  +L  N  S ++  I GET LH+  +  Q E V+ L+       L +    +  T LH+A+    T +V  LL+     +A    GYT L +    ++  G + +   L EAGA
Sbjct:  369 LHVAAHCGHYRVTKLLLDKRAN-PNARALNGFTPLHIACKKNRIKV-MELLVKYGASIQAITESGLTPIHVAAFMGHLNIV-LLLLQNGASPDVTNIRGETALHMAARAGQVEVVRCLLRN---GALVDARAREEQTPLHIASRLGKTEIVQLLLQHMAHPDAATTNGYTPLHI----SAREGQVDVASVLLEAGA 554          
BLAST of DY304796 vs. ExPASy Swiss-Prot
Match: ANK2_HUMAN (Ankyrin-2 OS=Homo sapiens GN=ANK2 PE=1 SV=3)

HSP 1 Score: 85.1149 bits (209), Expect = 6.190e-16
Identity = 62/196 (31.63%), Postives = 93/196 (47.45%), Query Frame = 2
Query:    2 LHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITREXXXXXXXXXXXXXNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQIVPALEEAGA 589
            LHV+A  GH  + K LL+ R      + LNG TPLH++C K  +++  E               G TP+H AA  G +NI+  +L  N  S ++  I GET LH+  +  Q E V+ L+       L +    +  T LH+A+    T +V  LL+     +A    GYT L +    ++  G + +   L EAGA
Sbjct:  369 LHVAAHCGHYRVTKLLLDKRAN-PNARALNGFTPLHIACKKNRIKV-MELLVKYGASIQAITESGLTPIHVAAFMGHLNIV-LLLLQNGASPDVTNIRGETALHMAARAGQVEVVRCLLRN---GALVDARAREEQTPLHIASRLGKTEIVQLLLQHMAHPDAATTNGYTPLHI----SAREGQVDVASVLLEAGA 554          
BLAST of DY304796 vs. ExPASy Swiss-Prot
Match: ANK3_HUMAN (Ankyrin-3 OS=Homo sapiens GN=ANK3 PE=1 SV=3)

HSP 1 Score: 84.7297 bits (208), Expect = 8.085e-16
Identity = 54/172 (31.40%), Postives = 81/172 (47.09%), Query Frame = 2
Query:    2 LHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITREXXXXXXXXXXXXXNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTAL 517
            LHV+A  GH  + K LL+ +      K LNG TPLH++C K  +++  E               G TP+H AA  G +NI+ +++  +  S     + GET LH+  ++ Q E V+YL++             D  T LH++       +V  LL+ G   NA    GYT L
Sbjct:  371 LHVAAHCGHYKVAKVLLDKKAN-PNAKALNGFTPLHIACKKNRIKV-MELLLKHGASIQAVTESGLTPIHVAAFMGHVNIVSQLMH-HGASPNTTNVRGETALHMAARSGQAEVVRYLVQD---GAQVEAKAKDDQTPLHISARLGKADIVQQLLQQGASPNAATTSGYTPL 536          
BLAST of DY304796 vs. ExPASy Swiss-Prot
Match: ANK1_MOUSE (Ankyrin-1 OS=Mus musculus GN=Ank1 PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.601e-14
Identity = 62/199 (31.16%), Postives = 88/199 (44.22%), Query Frame = 2
Query:    2 LHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITREXXXXXXXXXXXXXNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQIVPALEEAGARRC 598
            LHV+A  GH  + K LL+   +    + LNG TPLH++C K H+ +  E               G TPLH A+  G + I+  +L     S  +  +  ET LH+  +    E  KYL++  N  K AN    D  T LH A     T MV  LL+ G   N     G+T L     +     AL +   LE+  ++ C
Sbjct:  338 LHVAAHCGHHRVAKVLLDKGAK-PNSRALNGFTPLHIACKKNHIRV-MELLLKTGASIDAVTESGLTPLHVASFMGHLPIVKNLLQRG-ASPNVSNVKVETPLHMAARAGHTEVAKYLLQ--NKAK-ANAKAKDDQTPLHCAARIGHTGMVKLLLENGASPNLATTAGHTPLHTAAREGHVDTALAL---LEKEASQAC 527          

HSP 2 Score: 69.3218 bits (168), Expect = 3.515e-11
Identity = 63/193 (32.64%), Postives = 90/193 (46.63%), Query Frame = 2
Query:    2 LHVSAMAGHLDIVKELLE--ARQEFAWKKDLNGHTPLHLSCSKGHLEITREXXXXXXXXXXXXXNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQIVPAL 574
            LHV+A  G + + + LLE  A    A K   NG TPLH++    +L+I +              N G TPLH AA + +I +   +L     SA   ++ G T LHL  +    E V  L   L+     N+ +  G T LHL +      +   L+K GV V+A  R GYT L V    AS+ G +++V  L
Sbjct:  536 LHVAAKYGKVRLAELLLEHDAHPNAAGK---NGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWN-GYTPLHIAAKQNQIEVARSLLQYG-GSANAESVQGVTPLHLAAQEGHTEMVALL---LSKQANGNLGNKSGLTPLHLVSQEGHVPVADVLIKHGVTVDATTRMGYTPLHV----ASHYGNIKLVKFL 716          
BLAST of DY304796 vs. ExPASy Swiss-Prot
Match: ANK1_HUMAN (Ankyrin-1 OS=Homo sapiens GN=ANK1 PE=1 SV=3)

HSP 1 Score: 78.1814 bits (191), Expect = 7.567e-14
Identity = 62/196 (31.63%), Postives = 89/196 (45.41%), Query Frame = 2
Query:    2 LHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITREXXXXXXXXXXXXXNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQIVPALEEAGA 589
            LHV+A  GH  + K LL+   +    + LNG TPLH++C K H+ +  E               G TPLH A+  G + I+  +L     S  +  +  ET LH+  +    E  KYL++  N  K+ N    D  T LH A     T MV  LL+   + N     G+T L +    A+  G ++ V AL E  A
Sbjct:  342 LHVAAHCGHHRVAKVLLDKGAK-PNSRALNGFTPLHIACKKNHVRV-MELLLKTGASIDAVTESGLTPLHVASFMGHLPIVKNLLQRG-ASPNVSNVKVETPLHMAARAGHTEVAKYLLQ--NKAKV-NAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHI----AAREGHVETVLALLEKEA 527          

HSP 2 Score: 68.1662 bits (165), Expect = 7.831e-11
Identity = 60/191 (31.41%), Postives = 87/191 (45.55%), Query Frame = 2
Query:    2 LHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITREXXXXXXXXXXXXXNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQIVPAL 574
            LHV+A  G + + + LLE R         NG TPLH++    +L+I +              N G TPLH AA + ++ +   +L     SA   ++ G T LHL  +    E V  L   L+     N+ +  G T LHL        +   L+K GV V+A  R GYT L V    AS+ G +++V  L
Sbjct:  540 LHVAAKYGKVRVAELLLE-RDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWN-GYTPLHIAAKQNQVEVARSLLQYG-GSANAESVQGVTPLHLAAQEGHAEMVALL---LSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHV----ASHYGNIKLVKFL 720          
BLAST of DY304796 vs. ExPASy Swiss-Prot
Match: CSKI1_RAT (Caskin-1 OS=Rattus norvegicus GN=Caskin1 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.202e-13
Identity = 58/204 (28.43%), Postives = 92/204 (45.10%), Query Frame = 2
Query:    2 LHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITREXXXXXXXXXXXXXNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETV-------LHLTVKNNQYEAVKYLMET-LNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQIVPALEEAGA 589
            LH +A  G  + +K +L+A        D  GH PLHL+   GH +++ E             N G+TPL  A   GR+ ++  +LS N+ +A +    G+T        LHL  KN   + ++ L++  ++I +          T LH A     T +V  LL  G++    N    TALD+V    ++  + +I   L EA A
Sbjct:   86 LHYAAWQGRKEPMKLVLKAGSAVNVPSD-EGHIPLHLAAQHGHYDVS-EMLLQHQSNPCIVDNSGKTPLDLACEFGRVGVVQLLLSSNMCAALLEPRPGDTTDPNGTSPLHLAAKNGHIDIIRLLLQAGIDINR-----QTKSGTALHEAALCGKTEVVRLLLDSGINAQVRNTYSQTALDIVHQFTTSQASKEIKQLLREASA 282          
BLAST of DY304796 vs. ExPASy Swiss-Prot
Match: CSKI1_MOUSE (Caskin-1 OS=Mus musculus GN=Caskin1 PE=1 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 2.202e-13
Identity = 58/204 (28.43%), Postives = 92/204 (45.10%), Query Frame = 2
Query:    2 LHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITREXXXXXXXXXXXXXNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETV-------LHLTVKNNQYEAVKYLMET-LNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQIVPALEEAGA 589
            LH +A  G  + +K +L+A        D  GH PLHL+   GH +++ E             N G+TPL  A   GR+ ++  +LS N+ +A +    G+T        LHL  KN   + ++ L++  ++I +          T LH A     T +V  LL  G++    N    TALD+V    ++  + +I   L EA A
Sbjct:   86 LHYAAWQGRKEPMKLVLKAGSAVNVPSD-EGHIPLHLAAQHGHYDVS-EMLLQHQSNPCMVDNSGKTPLDLACEFGRVGVVQLLLSSNMCAALLEPRPGDTTDPNGTSPLHLAAKNGHIDIIRLLLQAGIDINR-----QTKSGTALHEAALCGKTEVVRLLLDSGINAQVRNTYSQTALDIVHQFTTSQASKEIKQLLREASA 282          
The following BLAST results are available for this feature:
BLAST of DY304796 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
Y5262_ARATH1.107e-2230.49Ankyrin repeat-containing protein At5g02620 OS=Ara... [more]
Y2168_ARATH2.685e-1931.98Ankyrin repeat-containing protein At2g01680 OS=Ara... [more]
Y3236_ARATH5.599e-1730.05Ankyrin repeat-containing protein At3g12360 OS=Ara... [more]
ANK2_MOUSE6.190e-1631.63Ankyrin-2 OS=Mus musculus GN=Ank2 PE=1 SV=2[more]
ANK2_HUMAN6.190e-1631.63Ankyrin-2 OS=Homo sapiens GN=ANK2 PE=1 SV=3[more]
ANK3_HUMAN8.085e-1631.40Ankyrin-3 OS=Homo sapiens GN=ANK3 PE=1 SV=3[more]
ANK1_MOUSE2.601e-1431.16Ankyrin-1 OS=Mus musculus GN=Ank1 PE=1 SV=2[more]
ANK1_HUMAN7.567e-1431.63Ankyrin-1 OS=Homo sapiens GN=ANK1 PE=1 SV=3[more]
CSKI1_RAT2.202e-1328.43Caskin-1 OS=Rattus norvegicus GN=Caskin1 PE=1 SV=1[more]
CSKI1_MOUSE2.202e-1328.43Caskin-1 OS=Mus musculus GN=Caskin1 PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionKN0AAQ9YL19RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304796 ID=DY304796; Name=DY304796; organism=Citrus clementina; type=EST; length=933bp
TCTTCATGTTTCAGCTATGGCTGGCCATTTAGATATTGTGAAGGAACTTC
TAGAGGCGCGTCAGGAATTCGCATGGAAAAAGGACTTGAATGGGCACACG
CCTTTGCACCTGTCCTGCAGCAAAGGCCATCTAGAAATAACCCGAGAGCT
GCTAAAGCTGGACCCTGACCTCTCTTCTTTGCCAGACAACGAAGGTCGAA
CACCACTCCACTGGGCTGCGATTAAAGGCCGAATCAACATTATTGATGAG
ATACTTTCACTGAACCTCCAGTCAGCTGAGATGAGAACCATACATGGCGA
GACAGTTCTCCATCTTACTGTGAAAAATAATCAGTATGAAGCCGTTAAGT
ACTTGATGGAGACTCTGAACATCACAAAACTGGCCAACATGCCAGATAAT
GATGGCAACACAATATTGCATCTTGCAACTGCTGGAAAGCTTACTACGAT
GGTCATCTACTTACTGAAGCTTGGCGTGGATGTAAATGCAATAAACAGAA
AGGGTTACACTGCTCTTGACGTAGTGGAGTCTGATGCAAGCAATTCAGGT
GCTCTTCAAATTGTACCTGCATTAGAAGAAGCAGGGGCTAGGAGATGTGA
CCAGTTGCCCCCAATGTCGCCACACGATATTCAACCCATAGGCGACACTA
GCCCCAATCAGCGCACAATCTTCAATACCAAGAAGGGCTCCCCGAGAATC
TCCATCTCGACATCACCGCCGCCGCAACCGTCGTCGCCCAAGAAAGCAGA
TTGAGCTCCCAACCGAAGGTTTAAGAAATGCGCGCAAGAACCATATAATT
GGAGCGGGTTTGATTGCTACGGTTACGTTTGCTGCTGGGATAAACCCACC
TGGGGGCCTTAACCCAATTTAATGGGAAAAACCCTGGTGGTTAAACCAAA
TTCCCTTTAAATTCTTCAGGGTTTGAAACATTT
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