DY304798
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY304798 vs. ExPASy Swiss-Prot
Match: RING4_ARATH (E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana GN=At4g11680 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 7.407e-30 Identity = 69/150 (46.00%), Postives = 94/150 (62.67%), Query Frame = 2 Query: 293 EPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRXXXXXXXXXXXXXXXXXXXXDE*ERFPGEND-SSVAKNLESTNTFPSFLWGIVGVHRKTAKWETL 739 EPS+ VRETAAEQLEERQS WAYS+P++ LD+LWNL FV + AVL +S +EKP +PLR+ +VGY +QC H+ CV +E++RRRR + + S+ AK+LES NT SF+W I+G + +A +TL Sbjct: 83 EPSMLVRETAAEQLEERQSDWAYSKPVVFLDILWNLAFVAIGVAVLILSRDEKPNMPLRVWVVGYGIQCWLHMACVCVEYRRRRRRRHPEDGGGSGLTNSSSQQYVSLAQLEDRGETSNPAKHLESANTMFSFIWWIIGFYWVSAGGQTL 232
BLAST of DY304798 vs. ExPASy Swiss-Prot
Match: RING2_ARATH (E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana GN=At1g63170 PE=2 SV=2) HSP 1 Score: 125.561 bits (314), Expect = 4.065e-28 Identity = 70/157 (44.59%), Postives = 93/157 (59.24%), Query Frame = 2 Query: 293 EPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRR-RXXXXXXXXXXXXXXXXXXXXDE*E----------------RFPGENDSSVAKNLESTNTFPSFLWGIVGVH 712 EPS+ VRE AAEQLEERQS WAYS+P++VLD +WNL FV+VA AVL +S +E P +PLR+ I+GY LQC+ H+ CV +E++RR R DE E + EN+S AK+LES NT SF+W ++G + Sbjct: 48 EPSMLVREAAAEQLEERQSDWAYSKPVVVLDFVWNLAFVVVATAVLVLSSDENPNMPLRVWIIGYGLQCMMHMVCVCVEYRRRNSRRRRDLSPRSSSSSSSSSSSMDEEEGLGLSRNSDERYLELGQLENENNS-FAKHLESANTMISFIWWVIGFY 203
BLAST of DY304798 vs. ExPASy Swiss-Prot
Match: RING1_ARATH (E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana GN=At1g12760 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 2.017e-27 Identity = 70/169 (41.42%), Postives = 93/169 (55.03%), Query Frame = 2 Query: 293 EPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRXXXXXXXXXXXXXXXXXXXXDE*ERFPGE--------------------NDSSVAKNLESTNTFPSFLWGIVGVHRKTAKWETL 739 EPS+ VRE AAEQLEERQS WAYS+P++VLD++WNL FV VA A+L +S E P +PLR+ ++GYALQC+ H+ CV +E++RR R E SSVAK+LES NT SF+W I+G + +A + L Sbjct: 74 EPSMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNLAFVSVATAILVMSRKEHPIMPLRVWLLGYALQCVLHMVCVCVEYRRRNRRRTNRTTTTTPPRSRSSSSSSSSSSLEEEALGSRRNSGVQDLSLGHLDTESSSVAKHLESANTMFSFIWWIIGFYWVSAGGQEL 242 The following BLAST results are available for this feature:
BLAST of DY304798 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY304798 ID=DY304798; Name=DY304798; organism=Citrus clementina; type=EST; length=917bpback to top |