DY304810

Overview
NameDY304810
Unique NameDY304810
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length966
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY304810 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.947e-52
Identity = 107/239 (44.77%), Postives = 150/239 (62.76%), Query Frame = 2
Query:    5 KSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGEIFVMTIYRGQGKHTTEQEFKQLGLSAGFPHLR 721
            K L  +A+G+S AP +L +    LM +W  + +AVLD  I PF K +G  A+ Y+G  P  N +  + MS  S   M  +L+ Y GF+G+K +VDVGG  G  L MI+ K+P I +GINF+LP VV +APS  GV H+GGDMF S+P  DAIFMKW+   W+DD C+ +++NCY+ALP  GK+I  E VLP+  + S  T+ ++  ++ VM  +   GK  TE+EF+ L   AGF   R
Sbjct:  100 KFLTKNADGVSMAPLLLMNQDKVLMESWYHLKDAVLDGGI-PFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILEVYRGFEGLKTVVDVGGGTGATLNMIISKYPTI-KGINFELPHVVEDAPSHSGVEHVGGDMFVSVPKGDAIFMKWICHDWSDDHCRKLLKNCYQALPDNGKVILAECVLPEAPDTSLATQNVVHVDV-VMLAHNPGGKERTEKEFEALAKGAGFKEFR 335          
BLAST of DY304810 vs. ExPASy Swiss-Prot
Match: COMT1_CAPAN (Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2)

HSP 1 Score: 201.06 bits (510), Expect = 8.182e-51
Identity = 102/239 (42.68%), Postives = 147/239 (61.51%), Query Frame = 2
Query:    5 KSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGEIFVMTIYRGQGKHTTEQEFKQLGLSAGFPHLR 721
            K L  +A+G+S AP +L +    LM +W  + +AVLD  + PF K +G  A+ Y+G  P  N +  + MS  S   M  +L+ Y GF+G+  +VDVGG  G  + MI+ K+P I +GINFDL  V+ +AP+ PGV H+G DMF S+P ADAIFMKW+   W+D+ C   ++NCY+ALPA GK++  E +LP+  + S  T+  +  +I VM  +   GK  TE+EF+ L   AGF   R
Sbjct:  109 KLLTKNADGVSVAPLLLMNQDKVLMESWYHLTDAVLDGGV-PFNKAYGMTAFEYHGTDPRFNKVFNRGMSDHSTMTMKKILEDYKGFEGLNSIVDVGGGTGATVNMIVSKYPSI-KGINFDLSHVIEDAPAYPGVEHVGRDMFVSVPKADAIFMKWICHDWSDEHCLKFLKNCYEALPANGKVLVAECILPETPDTSAATKNAVHVDI-VMLAHNPGGKERTEKEFEALAKGAGFTGFR 344          
BLAST of DY304810 vs. ExPASy Swiss-Prot
Match: COMT1_OCIBA (Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.823e-50
Identity = 102/235 (43.40%), Postives = 144/235 (61.28%), Query Frame = 2
Query:    5 KSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGEIFVMTIYRGQGKHTTEQEFKQLGLSAGF 709
            K L  + +G+S AP  L +    LM +W  + +AV+D  I PF K +G  A+ Y+G  P  N +  + MS  S   M  +L+ Y GF G+K +VDVGG  G  L MI+ K+P I +GINFDLP V+ +APS PGV H+GGDMF S+P  DAIFMKW+   W+D+ C   ++NCY ALP  GK+I  E VLP+  +    T+ ++  ++ +M  +   GK  TE+EF+ L  +AGF
Sbjct:  111 KFLTKNEDGVSMAPLTLMNQDKVLMESWYHLSDAVVDGGI-PFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILETYTGFDGLKTVVDVGGGTGATLNMIVSKYPSI-KGINFDLPHVIEDAPSYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCVKFLKNCYDALPQNGKVILAECVLPEAPDTGLATKNVVHIDV-IMLAHNPGGKERTEKEFQGLAKAAGF 342          
BLAST of DY304810 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 2.380e-50
Identity = 105/245 (42.86%), Postives = 148/245 (60.41%), Query Frame = 2
Query:    5 KSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGEIFVMTIYRGQGKHTTEQEFKQLGLSAGFP----HLRAF 727
            K LV + +G+S +   L +    LM +W  + +AVLD  I PF K +G  A+ Y+G  P  N +  K MS  S   M  +L+ Y GF+G+K LVDVGG  G  +  I+ K+P I +GINFDLP V+ +APS PGV H+GGDMF SIP ADA+FMKW+   W+D+ C   ++NCY+ALP  GK+I  E +LP   + S  T+ ++  ++ +M  +   GK  T++EF+ L   AGF     H  AF
Sbjct:  113 KYLVKNEDGVSISALNLMNQDKVLMESWYHLKDAVLDGGI-PFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYTGFEGLKSLVDVGGGTGAVINTIVSKYPTI-KGINFDLPHVIEDAPSYPGVEHVGGDMFVSIPKADAVFMKWICHDWSDEHCLKFLKNCYEALPDNGKVIVAECILPVAPDSSLATKGVVHIDV-IMLAHNPGGKERTQKEFEDLAKGAGFQGFKVHCNAF 354          
BLAST of DY304810 vs. ExPASy Swiss-Prot
Match: COMT1_CAPCH (Caffeic acid 3-O-methyltransferase OS=Capsicum chinense GN=COMT PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 6.926e-50
Identity = 103/248 (41.53%), Postives = 149/248 (60.08%), Query Frame = 2
Query:    5 KSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGEIFVMTIYRGQGKHTTEQEFKQLGLSAGFPHLRAFYVDYFHT 748
            K L  + +G+S AP +L +    LM +W  + +AVLD  + PF K +G   + Y+G  P  N +    MS  +   M  +L+ Y GF+G+  +VDVGG  G  + MI+ K+P I +GINFDLP V+ +APS PGV  +GGDMF S+P ADAIFMKW+   W+DD C  +++NCY+ALPA GK+I  E +LP+  + S  T++ + G+I +M  +   GK  TE++F+ L     F   R     Y HT
Sbjct:  109 KFLTKNGDGVSIAPILLMNQDKVLMESWYHLTDAVLDGGV-PFNKAYGMTTFEYHGTDPRFNKVFNCGMSDHTTLSMKKILEDYTGFEGLNSIVDVGGGTGATVNMIVSKYPSI-KGINFDLPHVIRDAPSYPGVEQVGGDMFVSVPKADAIFMKWICHDWSDDHCIKLLKNCYEALPANGKVIIVECILPEAPDTSAATKSKVHGDI-IMLAHNPGGKERTEKDFEALANWGWFSRFRKVCCAY-HT 352          
BLAST of DY304810 vs. ExPASy Swiss-Prot
Match: COMT2_OCIBA (Caffeic acid 3-O-methyltransferase 2 OS=Ocimum basilicum GN=COMT2 PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 9.046e-50
Identity = 102/235 (43.40%), Postives = 143/235 (60.85%), Query Frame = 2
Query:    5 KSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGEIFVMTIYRGQGKHTTEQEFKQLGLSAGF 709
            K L  + +G+S AP  L +    LM +W  + +AVLD  I PF K +G  A+ Y+G  P  N +  + MS  S   M  +L+ Y GF G+K +VDVGG  G  L MI+ K+P I +GINFDLP VV +APS PGV H+GGDMF S+P  DAIFMKW+   W+D  C   ++ CY+ALP  GK+I  E VLP+  +    T+ ++  ++ +M  +   GK  TE+EF+ L  ++GF
Sbjct:  111 KFLTKNEDGVSMAPLALMNQDKVLMESWYHLKDAVLDGGI-PFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILETYTGFDGLKTVVDVGGGTGATLNMIISKYPSI-KGINFDLPHVVEDAPSYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDAHCVKFLKKCYEALPENGKVILAECVLPEAPDTGLATKNVVHIDV-IMLAHNPGGKERTEKEFQVLAKASGF 342          
BLAST of DY304810 vs. ExPASy Swiss-Prot
Match: COMT1_SACOF (Caffeic acid 3-O-methyltransferase OS=Saccharum officinarum GN=COMT PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 9.046e-50
Identity = 103/244 (42.21%), Postives = 142/244 (58.20%), Query Frame = 2
Query:    2 GKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGEIFVMTIYRGQGKHTTEQEFKQLGLSAGFPHLRAFYV 733
            GK L  + +G+S A   L +    LM +W  + +AVLD  I PF K +G  A+ Y+G  P  N +  + M   SV     +L+ Y GF+GV  LVDVGG  G  L  I   HP I +GINFDLP V++EAP  PGV H+GGDMFKS+PA DAI MKW+L  W+D  C  +++NCY ALP  GK+I  E VLP ++    + + +   ++ +M  +   G+   E+EF  L   AGF   +A Y+
Sbjct:  111 GKWLTPNEDGVSMAALTLMNQDKVLMESWYYLKDAVLDGGI-PFNKAYGMTAFEYHGTDPRFNRVFNEGMKNHSVIITKKLLEFYTGFEGVSTLVDVGGGIGATLHAITSHHPQI-KGINFDLPHVISEAPPFPGVQHVGGDMFKSVPAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIIVECVLPVNTEAVPKAQGVFHVDM-IMLAHNPGGRERYEREFHDLAKGAGFSGFKATYI 351          
BLAST of DY304810 vs. ExPASy Swiss-Prot
Match: COMT1_MAIZE (Caffeic acid 3-O-methyltransferase OS=Zea mays PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 9.046e-50
Identity = 101/243 (41.56%), Postives = 142/243 (58.44%), Query Frame = 2
Query:    5 KSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGEIFVMTIYRGQGKHTTEQEFKQLGLSAGFPHLRAFYV 733
            K L  + +G+S A   L +    LM +W  + +AVLD  I PF K +G  A+ Y+G     N +  + M   SV     +LD Y GF+GV  LVDVGG  G  L  I  +HP I  G+NFDLP V++EAP  PGV H+GGDMF S+PA DAI MKW+L  W+D  C  +++NCY ALP  GK+I  E VLP ++  + + + +   ++ +M  +   GK   E+EF++L   AGF   +A Y+
Sbjct:  114 KWLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGI-PFNKAYGMTAFEYHGTDARFNRVFNEGMKNHSVIITKKLLDFYTGFEGVSTLVDVGGGVGATLHAITSRHPHI-SGVNFDLPHVISEAPPFPGVRHVGGDMFASVPAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHVDM-IMLAHNPGGKERYEREFRELAKGAGFSGFKATYI 353          
BLAST of DY304810 vs. ExPASy Swiss-Prot
Match: COMT1_POPTM (Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 2.015e-49
Identity = 100/235 (42.55%), Postives = 142/235 (60.43%), Query Frame = 2
Query:    5 KSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGEIFVMTIYRGQGKHTTEQEFKQLGLSAGF 709
            K L  + +G+S +P  L +    LM +W  + +A+LD  I PF K +G  A+ Y+G  P  N +  K MS  S   M  +L+ Y GF+G+  LVDVGG  G  +  I+ K+P I +GINFDLP V+ +APS PGV H+GGDMF S+P ADA+FMKW+   W+D  C   ++NCY ALP  GK+I  E +LP   + S  T+ ++  ++ +M  +   GK  TE+EF+ L   AGF
Sbjct:  113 KFLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILDGGI-PFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSLVDVGGGTGAVVNTIVSKYPSI-KGINFDLPHVIEDAPSYPGVEHVGGDMFVSVPKADAVFMKWICHDWSDAHCLKFLKNCYDALPENGKVILVECILPVAPDTSLATKGVVHVDV-IMLAHNPGGKERTEKEFEGLAKGAGF 344          
BLAST of DY304810 vs. ExPASy Swiss-Prot
Match: COMT1_CATRO (Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 2.015e-49
Identity = 100/235 (42.55%), Postives = 145/235 (61.70%), Query Frame = 2
Query:    5 KSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGEIFVMTIYRGQGKHTTEQEFKQLGLSAGF 709
            K L  + +G+S A  +L +    LM +W  + +AVL+  I PF K +G  A+ Y+GK P  N +  + MS  S   M  +L+ Y GF+G+K +VDVGG  G  L MI+ K+P I +GINFDLP V+ +APS PGV H+GGDMF S+P  DAIFMKW+   W+D  C   ++NC++ALP  GK+I  E +LP+  + +  T+  +  ++ +M  +   GK  TE+EF+ L   AGF
Sbjct:  113 KFLTKNEDGVSMAALLLMNQDKVLMESWYHLKDAVLEGGI-PFNKAYGMTAFEYHGKDPRFNKVFNQGMSNHSTIIMKKILEIYQGFQGLKTVVDVGGGTGATLNMIVSKYPSI-KGINFDLPHVIEDAPSYPGVDHVGGDMFVSVPKGDAIFMKWICHDWSDAHCLKFLKNCHEALPENGKVILAECLLPEAPDSTLSTQNTVHVDV-IMLAHNPGGKERTEKEFEALAKGAGF 344          
The following BLAST results are available for this feature:
BLAST of DY304810 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
COMT1_COFCA1.947e-5244.77Caffeic acid 3-O-methyltransferase OS=Coffea canep... [more]
COMT1_CAPAN8.182e-5142.68Caffeic acid 3-O-methyltransferase OS=Capsicum ann... [more]
COMT1_OCIBA1.823e-5043.40Caffeic acid 3-O-methyltransferase 1 OS=Ocimum bas... [more]
COMT1_MEDSA2.380e-5042.86Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]
COMT1_CAPCH6.926e-5041.53Caffeic acid 3-O-methyltransferase OS=Capsicum chi... [more]
COMT2_OCIBA9.046e-5043.40Caffeic acid 3-O-methyltransferase 2 OS=Ocimum bas... [more]
COMT1_SACOF9.046e-5042.21Caffeic acid 3-O-methyltransferase OS=Saccharum of... [more]
COMT1_MAIZE9.046e-5041.56Caffeic acid 3-O-methyltransferase OS=Zea mays PE=... [more]
COMT1_POPTM2.015e-4942.55Caffeic acid 3-O-methyltransferase 1 OS=Populus tr... [more]
COMT1_CATRO2.015e-4942.55Caffeic acid 3-O-methyltransferase OS=Catharanthus... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAQ9YM11RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304810 ID=DY304810; Name=DY304810; organism=Citrus clementina; type=EST; length=966bp
CGGGAAATCCCTCGTTACTGATGCCGAGGGTCTATCGTACGCGCCCTACG
TGCTCCAGCATCACCAGGACGCGCTTATGAGCGCGTGGCCTTTGGTGCAC
GAGGCCGTTCTGGACCCAACTATTGAGCCATTTGTGAAAGTCCATGGCGA
GCCGGCATATAGTTATTATGGGAAGAAGCCTGAAATGAACGGCTTGATGC
GAAAAGCCATGTCGGGAGTGTCCGTGCCGTTCATGACGTCCGTTTTGGAC
GGTTACGATGGGTTCAAAGGTGTGAAGCGATTGGTTGATGTGGGTGGGAG
TGCAGGTGATTGCCTGAGGATGATATTACAGAAACATCCTTTTATATGTG
AAGGGATCAATTTTGATTTGCCTGAGGTTGTTGCCGAAGCTCCAAGTATC
CCTGGAGTGACCCATATTGGTGGGGACATGTTTAAGTCCATTCCTGCCGC
TGATGCTATCTTTATGAAGTGGGTTTTAACTACATGGACTGACGATGAAT
GCAAGCTGATAATGGAGAACTGTTACAAGGCTCTTCCGGCAGGAGGAAAA
CTGATTGCTTGTGAGCCCGTGCTGCCTGATGATTCAAACGAGAGTCAGAG
GACGCGTGCTCTCTTAGAAGGGGAAATTTTTGTAATGACCATCTACAGGG
GCCAAGGTAAACACACGACTGAACAAGAATTTAAGCAACTTGGTCTCTCT
GCCGGTTTTCCACACTTGAGAGCTTTTTATGTCGATTATTTTCACACTCT
TCCTTGATTTCCCAAAGTAATTTTAATTTCTGGGATCCTTAAAAAACTTG
TGGAAATATTTGTCAGGGACTGTGGGTGCCTAGGAAGGGAAAAAATTGTC
TATAATTTAAAAATGGTGAATTAGAGGGTTAACCCCTAGGCTGCCTACCA
AAAAAAAAAAAGGGAGCCCATTTTATTCTATACCGTAATTTAGTTGTGTT
TAAATTTTCAGAAGAC
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